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JIRA Issues
This page lists the JIRA issues that have been linked to builds related to this plan, ordered by last built. This includes issues specified in commit messages, labels or comments for builds, as well as issues manually linked to builds.
| Type | Key | Summary | Status | Assignee | Fix versions | Related Builds | Last Built |
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JAL-1054 | jalview does not fetch from a URL containing a redirect | Closed | Ben Soares | 2.11.1_js, 2.11.4.0 | 5 related builds | Last built: 4 weeks ago |
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JAL-4090 | Release 2.11.3.0 | Closed | James Procter | 2.11.3.0 | 7 related builds | Last built: 4 weeks ago |
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JAL-4159 | PaSiMap inclusion | Closed | Thomas Morell | 2.11.4.0 | 9 related builds | Last built: 4 weeks ago |
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JAL-4349 | spurious output image .extensions cause jalview CLI execution to fail with Null Pointer Exception | Open | Unassigned | 2.11.4.1 | 5 related builds | Last built: 4 weeks ago |
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JAL-4386 | Calculate tree using secondary structure annotation | In Progress | Renia Correya | 2.11.4.0, 2.11.5.0 | 11 related builds | Last built: 4 weeks ago |
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JAL-4392 | Consensus secondary structure visualization for alignments | Closed | Renia Correya | 2.11.4.0 | 6 related builds | Last built: 4 weeks ago |
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JAL-4414 | HTTP errors are often interpreted to the user as a file format error - and FileNotFound errors are not propagated from Web or Local file import | In Progress | Unassigned | 2.11.4.0, 2.11.4.1 | 7 related builds | Last built: 4 weeks ago |
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JAL-4418 | Jalview 2.11.4.0 release | Being documented | James Procter | 2.11.4.0 | 20 related builds | Last built: 4 weeks ago |
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JAL-4425 | optionally hide consensus/annotations when no data is available | In Progress | James Procter | 2.11.4.0, 2.11.5.0 | 5 related builds | Last built: 4 weeks ago |
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JAL-4427 | Annotation labels from protein disorder services include html tags from description | Closed | Renia Correya | 2.11.4.0 | 7 related builds | Last built: 4 weeks ago |
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JAL-4428 | integrate OSX codesigning scripts in jalview's repository | Reopened | James Procter | 2.11.4.1 | 7 related builds | Last built: 4 weeks ago |
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JAL-4442 | can't quit Jalview 2.11.3.3 on Windows 11 (Terminal Server) | Closed | Ben Soares | 2.11.4.0 | 4 related builds | Last built: 4 weeks ago |
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JAL-4460 | Adjusting the saved as file format via the Alignment window Save As... dialog box doesn't actually change the format used to save the alignment | Closed | Ben Soares | 2.11.4.0 | 7 related builds | Last built: 4 weeks ago |
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JAL-4461 | "Select format by extension" option in Jalview's "Save As" dialog's file type dropdown menu | Closed | Ben Soares | 2.11.4.0 | 7 related builds | Last built: 4 weeks ago |
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JAL-4464 | cannot store/restore group associated secondary structure consensus annotations | Open | James Procter | 2.11.5.0 | 4 related builds | Last built: 4 weeks ago |
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