Package	Files	Average Method Complexity	TOTAL Coverage
jalview.util jalview.util	44.0 44	3.5144508 3.51	0.5851768 0.585176858.5%

Class	Methods	Average Method Complexity	TOTAL Coverage
AWTConsole AWTConsole	7.0 7	4.142857 4.14	0.0 0.00%
ArgParserUtils.BaseInfo ArgParserUtils.BaseInfo	3.0 3	1.3333334 1.33	0.0 0.00%
BrowserLauncher BrowserLauncher	6.0 6	2.3333333 2.33	0.0 0.00%
DBRefUtils.DbRefComp DBRefUtils.DbRefComp	1.0 1	1.0 1	0.0 0.00%
GroupUrlLink GroupUrlLink	24.0 24	4.5416665 4.54	0.0 0.00%
GroupUrlLink.UrlStringTooLongException GroupUrlLink.UrlStringTooLongException	2.0 2	1.0 1	0.0 0.00%
ShortcutKeyMaskExWrapper8 ShortcutKeyMaskExWrapper8	3.0 3	1.6666666 1.67	0.0 0.00%
TableSorter TableSorter	29.0 29	1.7241379 1.72	0.0 0.00%
TableSorter.Arrow TableSorter.Arrow	4.0 4	2.25 2.25	0.0 0.00%
TableSorter.Directive TableSorter.Directive	1.0 1	1.0 1	0.0 0.00%
TableSorter.MouseHandler TableSorter.MouseHandler	1.0 1	4.0 4	0.0 0.00%
TableSorter.Row TableSorter.Row	2.0 2	4.5 4.5	0.0 0.00%
TableSorter.SortableHeaderRenderer TableSorter.SortableHeaderRenderer	2.0 2	1.5 1.5	0.0 0.00%
TableSorter.TableModelHandler TableSorter.TableModelHandler	1.0 1	7.0 7	0.0 0.00%
LaunchUtils LaunchUtils	18.0 18	6.2222223 6.22	0.27941176 0.2794117627.9%
ErrorLog ErrorLog	7.0 7	4.0 4	0.4117647 0.411764741.2%
Platform Platform	36.0 36	2.1666667 2.17	0.4292453 0.429245342.9%
HttpUtils HttpUtils	10.0 10	4.6 4.6	0.47712418 0.4771241847.7%
ArgParserUtils ArgParserUtils	4.0 4	4.0 4	0.5180723 0.518072351.8%
Format Format	22.0 22	6.7727275 6.77	0.5258799 0.525879952.6%
DBRefUtils DBRefUtils	21.0 21	7.3333335 7.33	0.60725075 0.6072507560.7%
Log4j Log4j	24.0 24	1.25 1.25	0.6090909 0.609090960.9%
ShortcutKeyMaskExWrapper ShortcutKeyMaskExWrapper	3.0 3	1.6666666 1.67	0.6111111 0.611111161.1%
ChannelProperties ChannelProperties	13.0 13	2.8461537 2.85	0.6137931 0.613793161.4%
ImageMaker.TYPE ImageMaker.TYPE	4.0 4	1.0 1	0.6363636 0.636363663.6%
MapList MapList	44.0 44	3.7954545 3.8	0.6479751 0.647975164.8%
ShiftList ShiftList	7.0 7	2.7142856 2.71	0.69491524 0.6949152469.5%
MapUtils MapUtils	3.0 3	2.6666667 2.67	0.73913044 0.7391304473.9%
FileUtils FileUtils	16.0 16	3.3125 3.31	0.78494626 0.7849462678.5%
ImageMaker ImageMaker	9.0 9	4.6666665 4.67	0.7906977 0.790697779.1%
Comparison Comparison	19.0 19	4.368421 4.37	0.79527557 0.7952755779.5%
UrlConstants UrlConstants	2.0 2	1.0 1	0.8 0.880%
MappingUtils MappingUtils	22.0 22	5.4545455 5.45	0.8146552 0.814655281.5%
LinkedIdentityHashSet LinkedIdentityHashSet	8.0 8	1.125 1.12	0.8181818 0.818181881.8%
StringUtils StringUtils	20.0 20	4.8 4.8	0.81846154 0.8184615481.8%
ShortcutKeyMaskExWrapper11 ShortcutKeyMaskExWrapper11	3.0 3	1.6666666 1.67	0.8333333 0.833333383.3%
SparseCount SparseCount	10.0 10	1.8 1.8	0.84 0.8484%
UrlLink UrlLink	26.0 26	3.2692308 3.27	0.8636364 0.863636486.4%
ArrayUtils ArrayUtils	3.0 3	2.6666667 2.67	0.8666667 0.866666786.7%
ParseHtmlBodyAndLinks ParseHtmlBodyAndLinks	7.0 7	3.142857 3.14	0.8695652 0.869565287%
UserAgent UserAgent	2.0 2	2.0 2	0.8857143 0.885714388.6%
ColorUtils ColorUtils	10.0 10	4.8 4.8	0.88709676 0.8870967688.7%
QuickSort QuickSort	22.0 22	2.5454545 2.55	0.89320385 0.8932038589.3%
MessageManager MessageManager	7.0 7	1.8571428 1.86	0.9047619 0.904761990.5%
JSONUtils JSONUtils	4.0 4	2.0 2	0.90909094 0.9090909490.9%
DnaUtils DnaUtils	3.0 3	4.0 4	0.9607843 0.960784396.1%
CaseInsensitiveString CaseInsensitiveString	4.0 4	2.0 2	1.0 1.0100%
Constants Constants	1.0 1	1.0 1	1.0 1.0100%
IntRangeComparator IntRangeComparator	2.0 2	1.5 1.5	1.0 1.0100%
LinkedIdentityHashSet.IdentityWrapper LinkedIdentityHashSet.IdentityWrapper	3.0 3	1.0 1	1.0 1.0100%
MathUtils MathUtils	1.0 1	2.0 2	1.0 1.0100%
QuickSort.DoubleComparator QuickSort.DoubleComparator	2.0 2	1.5 1.5	1.0 1.0100%
QuickSort.ExternalComparator QuickSort.ExternalComparator	2.0 2	1.5 1.5	1.0 1.0100%
QuickSort.FloatComparator QuickSort.FloatComparator	2.0 2	1.5 1.5	1.0 1.0100%
QuickSort.IntComparator QuickSort.IntComparator	2.0 2	1.5 1.5	1.0 1.0100%
ReverseListIterator ReverseListIterator	4.0 4	1.0 1	1.0 1.0100%
SetUtils SetUtils	1.0 1	7.0 7	1.0 1.0100%