Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
AutoCalcSetting	25	8	6	0.00%	Show methods

Class AutoCalcSetting

Class AutoCalcSetting	Line # 25	Total Statements 8	Complexity 6	TOTAL Coverage 0.00%
AutoCalcSetting(WsParamSetI,List<ArgumentI>,boolean)   AutoCalcSetting(WsParamSetI,List<ArgumentI>,boolean)	3434	3.03	1.01	0.0 0.00%
isAutoUpdate() : boolean   isAutoUpdate() : boolean	4242	1.01	1.01	0.0 0.00%
setAutoUpdate(boolean) : void   setAutoUpdate(boolean) : void	4747	1.01	1.01	0.0 0.00%
getPreset() : WsParamSetI   getPreset() : WsParamSetI	5252	1.01	1.01	0.0 0.00%
setPreset(WsParamSetI) : void   setPreset(WsParamSetI) : void	5757	1.01	1.01	0.0 0.00%
getArgumentSet() : List<ArgumentI>   getArgumentSet() : List<ArgumentI>	6363	1.01	1.01	0.0 0.00%

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.ws.params;
22
23		import java.util.List;
24
		0% Uncovered Elements: 14 (14) Complexity: 6 Complexity Density: 0.75
25		public abstract class AutoCalcSetting
26		{
27
28		protected boolean autoUpdate;
29
30		protected WsParamSetI preset;
31
32		protected List<ArgumentI> jobArgset;
33
		0% Uncovered Elements: 3 (3) Complexity: 1 Complexity Density: 0.33
34	0	public AutoCalcSetting(WsParamSetI preset2, List<ArgumentI> jobArgset2,...
35		boolean autoUpdate2)
36		{
37	0	autoUpdate = autoUpdate2;
38	0	preset = preset2;
39	0	jobArgset = jobArgset2;
40		}
41
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
42	0	public boolean isAutoUpdate()...
43		{
44	0	return autoUpdate;
45		}
46
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
47	0	public void setAutoUpdate(boolean autoUpdate)...
48		{
49	0	this.autoUpdate = autoUpdate;
50		}
51
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
52	0	public WsParamSetI getPreset()...
53		{
54	0	return preset;
55		}
56
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
57	0	public void setPreset(WsParamSetI preset)...
58		{
59		// TODO: test if service URL is in presets
60	0	this.preset = preset;
61		}
62
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
63	0	public List<ArgumentI> getArgumentSet()...
64		{
65	0	return jobArgset;
66		}
67
68		/**
69		*
70		* @return characteristic URI for this service. The URI should reflect the
71		* type and version of this service, enabling the service client code
72		* to recover the correct client for this calculation.
73		*/
74		public abstract String getServiceURI();
75
76		/**
77		* return any concrete service endpoints associated with this calculation.
78		* built in services should return a zero length array
79		*
80		* @return
81		*/
82		public abstract String[] getServiceURLs();
83
84		/**
85		*
86		* @return stringified representation of the parameters for this setting
87		*/
88		public abstract String getWsParamFile();
89
90		}