Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
MappingOutputPojo	23	18	20	0.00%	Show methods

Class MappingOutputPojo

Class MappingOutputPojo	Line # 23	Total Statements 18	Complexity 20	TOTAL Coverage 0.00%
getSeqName() : String   getSeqName() : String	4545	1.01	1.01	0.0 0.00%
setSeqName(String) : void   setSeqName(String) : void	5050	1.01	2.02	0.0 0.00%
getSeqResidue() : String   getSeqResidue() : String	5757	1.01	1.01	0.0 0.00%
setSeqResidue(String) : void   setSeqResidue(String) : void	6262	1.01	1.01	0.0 0.00%
getSeqStart() : int   getSeqStart() : int	6767	1.01	1.01	0.0 0.00%
setSeqStart(int) : void   setSeqStart(int) : void	7272	1.01	1.01	0.0 0.00%
getSeqEnd() : int   getSeqEnd() : int	7777	1.01	1.01	0.0 0.00%
setSeqEnd(int) : void   setSeqEnd(int) : void	8282	1.01	1.01	0.0 0.00%
getStrName() : String   getStrName() : String	8787	1.01	1.01	0.0 0.00%
setStrName(String) : void   setStrName(String) : void	9292	1.01	2.02	0.0 0.00%
getStrResidue() : String   getStrResidue() : String	9999	1.01	1.01	0.0 0.00%
setStrResidue(String) : void   setStrResidue(String) : void	104104	1.01	1.01	0.0 0.00%
getStrStart() : int   getStrStart() : int	109109	1.01	1.01	0.0 0.00%
setStrStart(int) : void   setStrStart(int) : void	114114	1.01	1.01	0.0 0.00%
getStrEnd() : int   getStrEnd() : int	119119	1.01	1.01	0.0 0.00%
setStrEnd(int) : void   setStrEnd(int) : void	124124	1.01	1.01	0.0 0.00%
getType() : String   getType() : String	129129	1.01	1.01	0.0 0.00%
setType(String) : void   setType(String) : void	134134	1.01	1.01	0.0 0.00%

 

Contributing tests

Source view

1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.ws.sifts;
22
		0% Uncovered Elements: 40 (40) Complexity: 20 Complexity Density: 1.11
23		public class MappingOutputPojo
24		{
25		private String seqName;
26
27		private String seqResidue;
28
29		private int seqStart;
30
31		private int seqEnd;
32
33		private String strName;
34
35		private String strResidue;
36
37		private int strStart;
38
39		private int strEnd;
40
41		private String type;
42
43		private static final int MAX_ID_LENGTH = 30;
44
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
45	0	public String getSeqName()...
46		{
47	0	return seqName;
48		}
49
		0% Uncovered Elements: 3 (3) Complexity: 2 Complexity Density: 2
50	0	public void setSeqName(String seqName)...
51		{
52	0	this.seqName = (seqName.length() > MAX_ID_LENGTH)
53		? seqName.substring(0, MAX_ID_LENGTH)
54		: seqName;
55		}
56
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
57	0	public String getSeqResidue()...
58		{
59	0	return seqResidue;
60		}
61
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
62	0	public void setSeqResidue(String seqResidue)...
63		{
64	0	this.seqResidue = seqResidue;
65		}
66
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
67	0	public int getSeqStart()...
68		{
69	0	return seqStart;
70		}
71
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
72	0	public void setSeqStart(int seqStart)...
73		{
74	0	this.seqStart = seqStart;
75		}
76
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
77	0	public int getSeqEnd()...
78		{
79	0	return seqEnd;
80		}
81
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
82	0	public void setSeqEnd(int seqEnd)...
83		{
84	0	this.seqEnd = seqEnd;
85		}
86
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
87	0	public String getStrName()...
88		{
89	0	return strName;
90		}
91
		0% Uncovered Elements: 3 (3) Complexity: 2 Complexity Density: 2
92	0	public void setStrName(String strName)...
93		{
94	0	this.strName = (strName.length() > MAX_ID_LENGTH)
95		? strName.substring(0, MAX_ID_LENGTH)
96		: strName;
97		}
98
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
99	0	public String getStrResidue()...
100		{
101	0	return strResidue;
102		}
103
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
104	0	public void setStrResidue(String strResidue)...
105		{
106	0	this.strResidue = strResidue;
107		}
108
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
109	0	public int getStrStart()...
110		{
111	0	return strStart;
112		}
113
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
114	0	public void setStrStart(int strStart)...
115		{
116	0	this.strStart = strStart;
117		}
118
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
119	0	public int getStrEnd()...
120		{
121	0	return strEnd;
122		}
123
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
124	0	public void setStrEnd(int strEnd)...
125		{
126	0	this.strEnd = strEnd;
127		}
128
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
129	0	public String getType()...
130		{
131	0	return type;
132		}
133
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
134	0	public void setType(String type)...
135		{
136	0	this.type = type;
137		}
138
139		}