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  1. Project Clover database Wed Nov 13 2024 16:21:17 GMT
  2. Package jalview.io

File AlignmentFileWriterI.java

 

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Classes

Class Line # Actions
AlignmentFileWriterI 29 0 0
-1.0 -
 

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1    /*
2    * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3    * Copyright (C) $$Year-Rel$$ The Jalview Authors
4    *
5    * This file is part of Jalview.
6    *
7    * Jalview is free software: you can redistribute it and/or
8    * modify it under the terms of the GNU General Public License
9    * as published by the Free Software Foundation, either version 3
10    * of the License, or (at your option) any later version.
11    *
12    * Jalview is distributed in the hope that it will be useful, but
13    * WITHOUT ANY WARRANTY; without even the implied warranty
14    * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15    * PURPOSE. See the GNU General Public License for more details.
16    *
17    * You should have received a copy of the GNU General Public License
18    * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19    * The Jalview Authors are detailed in the 'AUTHORS' file.
20    */
21    package jalview.io;
22   
23    import jalview.api.AlignExportSettingsI;
24    import jalview.api.AlignmentViewPanel;
25    import jalview.api.FeatureSettingsModelI;
26    import jalview.datamodel.AlignmentI;
27    import jalview.datamodel.SequenceI;
28   
 
29    public interface AlignmentFileWriterI
30    {
31   
32    void setNewlineString(String newline);
33   
34    void setExportSettings(AlignExportSettingsI exportSettings);
35   
36    void configureForView(AlignmentViewPanel viewpanel);
37   
38    String print(SequenceI[] seqs, boolean jvsuffix);
39   
40    boolean hasWarningMessage();
41   
42    String getWarningMessage();
43   
44    }