Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
AlignmentRowsCollectionI	25	0	0	-1.0 -	Show methods

Class AlignmentRowsCollectionI

Class AlignmentRowsCollectionI	Line # 25	Total Statements 0	Complexity 0	TOTAL Coverage -1.0 -

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.api;
22
23		import jalview.datamodel.SequenceI;
24
		- Uncovered Elements: 0 (0) Complexity: 0 Complexity Density: -
25		public interface AlignmentRowsCollectionI extends Iterable<Integer>
26		{
27		/**
28		* Answers if the sequence at the given position is hidden.
29		*
30		* @param r
31		* the row index to check
32		* @return true if the sequence at r is hidden
33		*/
34		public boolean isHidden(int r);
35
36		/**
37		* Answers if any row in this collection is hidden
38		*
39		* @return true if there is at least 1 hidden row
40		*/
41		public boolean hasHidden();
42
43		/**
44		* Answers the sequence at the given position in the alignment
45		*
46		* @param r
47		* the row index to locate
48		* @return the sequence
49		*/
50		public SequenceI getSequence(int r);
51		}