simple 26-Mar-2019 15:22:57 Build Jalview Builds - jalviewjs - Jalview-JS-demo - Default Job #3 (JB-JB0-JOB1-3) started building on agent Default Agent simple 26-Mar-2019 15:22:57 simple 26-Mar-2019 15:22:57 Build working directory is /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1 simple 26-Mar-2019 15:22:57 Executing build Jalview Builds - jalviewjs - Jalview-JS-demo - Default Job #3 (JB-JB0-JOB1-3) simple 26-Mar-2019 15:22:57 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' simple 26-Mar-2019 15:22:57 Checking out into /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1 simple 26-Mar-2019 15:22:57 Updating source code to revision: cfa118f7383e300235afb04ec0e093bf4e50b928 simple 26-Mar-2019 15:22:57 Fetching 'refs/heads/Jalview-JS/demo' from 'http://source.jalview.org/git/jalview.git'. simple 26-Mar-2019 15:22:58 Checking out revision cfa118f7383e300235afb04ec0e093bf4e50b928. simple 26-Mar-2019 15:22:58 Creating local git repository in '/srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/.git'. simple 26-Mar-2019 15:22:58 Cloning into '/srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1'... simple 26-Mar-2019 15:22:58 done. simple 26-Mar-2019 15:23:04 Switched to a new branch 'Jalview-JS/demo' simple 26-Mar-2019 15:23:04 Branch Jalview-JS/demo set up to track remote branch Jalview-JS/demo from origin. simple 26-Mar-2019 15:23:04 Updated source code to revision: cfa118f7383e300235afb04ec0e093bf4e50b928 simple 26-Mar-2019 15:23:04 Finished task 'Checkout Default Repository' with result: Success simple 26-Mar-2019 15:23:04 Running pre-build action: VCS Version Collector simple 26-Mar-2019 15:23:04 Running pre-build action: Artifactory Release Staging simple 26-Mar-2019 15:23:04 Starting task 'run jalviewjs build' of type 'com.atlassian.bamboo.plugins.ant:task.builder.ant' command 26-Mar-2019 15:23:04 Beginning to execute external process for build 'Jalview Builds - jalviewjs - Jalview-JS-demo - Default Job #3 (JB-JB0-JOB1-3)'\n ... running command line: \n/home/bamboo/buildtools/x11-ant/bin/ant -Djava.io.tmpdir=/home/bamboo/latest/temp/JB-JB0-JOB1 -f build.xml build-site\n ... in: /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1\n ... using extra environment variables: \nbamboo_planRepository_1_branch=Jalview-JS/demo\nbamboo_capability_system_builder_maven_Artifactory_Maven_3=/usr\nbamboo_planRepository_1_branchDisplayName=Jalview-JS/demo\nbamboo_repository_revision_number=cfa118f7383e300235afb04ec0e093bf4e50b928\nbamboo_resultsUrl=https://builds.jalview.org/browse/JB-JB0-JOB1-3\nbamboo_build_working_directory=/srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1\nbamboo_planRepository_1_name=Jalview Git\nbamboo_buildKey=JB-JB0-JOB1\nbamboo_capability_system_jdk_JDK_1_8_0_171=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.171-8.b10.el7_5.x86_64\nbamboo_shortPlanName=Jalview-JS-demo\nbamboo_planRepository_name=Jalview Git\nbamboo_buildNumber=3\nbamboo_capability_system_jdk_OpenJDK_11_JRE_only=/home/bamboo/buildtools/jvm/jre11_x64_linux\nbamboo_shortJobName=Default Job\nbamboo_buildResultsUrl=https://builds.jalview.org/browse/JB-JB0-JOB1-3\nbamboo_planRepository_repositoryUrl=http://source.jalview.org/git/jalview.git\nbamboo_agentId=196609\nbamboo_planName=Jalview Builds - jalviewjs - Jalview-JS-demo\nbamboo_shortPlanKey=JB0\nbamboo_repository_6258783_branch_name=Jalview-JS/demo\nbamboo_shortJobKey=JOB1\nbamboo_capability_system_jdk_OpenJDK_11=/home/bamboo/buildtools/jvm/jdk11_x64_linux\nbamboo_planRepository_revision=cfa118f7383e300235afb04ec0e093bf4e50b928\nbamboo_buildTimeStamp=2019-03-26T15:19:48.372Z\nbamboo_repository_previous_revision_number=7a854962da5b44af995fa9dd6f4fb708d2b2036a\nbamboo_planRepository_previousRevision=7a854962da5b44af995fa9dd6f4fb708d2b2036a\nbamboo_repository_git_branch=Jalview-JS/demo\nbamboo_buildResultKey=JB-JB0-JOB1-3\nbamboo_repository_branch_name=Jalview-JS/demo\nbamboo_buildPlanName=Jalview Builds - jalviewjs - Jalview-JS-demo - Default Job\nbamboo_capability_system_builder_ant_j11_Ant=/home/bamboo/buildtools/j11/ant-j11\nbamboo_planRepository_1_revision=cfa118f7383e300235afb04ec0e093bf4e50b928\nbamboo_capability_system_builder_ant_x11_Ant=/home/bamboo/buildtools/x11-ant\nbamboo_repository_name=Jalview Git\nJAVA_HOME=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.171-8.b10.el7_5.x86_64\nbamboo_buildFailed=false\nANT_HOME=/home/bamboo/buildtools/x11-ant\nbamboo_planRepository_branch=Jalview-JS/demo\nbamboo_agentWorkingDirectory=/srv/bamboo/bamboo-home/xml-data/build-dir\nbamboo_capability_system_git_executable=/bin/git\nbamboo_repository_git_username=\nbamboo_planRepository_1_previousRevision=7a854962da5b44af995fa9dd6f4fb708d2b2036a\nbamboo_planRepository_branchDisplayName=Jalview-JS/demo\nbamboo_planRepository_1_type=gitv2\nbamboo_planRepository_branchName=Jalview-JS/demo\nbamboo_repository_6258783_git_username=\nbamboo_capability_system_builder_ant_j11_x11_Ant=/home/bamboo/buildtools/j11/x11-ant-j11\nbamboo_capability_system_builderivy_Ivy=/usr\nbamboo_capability_system_jdk_JDK=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.171-8.b10.el7_5.x86_64\nbamboo_plan_storageTag=plan-6062269\nbamboo_capability_system_builder_gradle_Gradle=/home/bamboo/buildtools/gradle\nbamboo_hg_cache_directory=/srv/bamboo/bamboo-home/xml-data/build-dir/_hg-repositories-cache\nbamboo_repository_6258783_git_repositoryUrl=http://source.jalview.org/git/jalview.git\nbamboo_planRepository_1_username=\nbamboo_planRepository_type=gitv2\nbamboo_git_cache_directory=/srv/bamboo/bamboo-home/xml-data/build-dir/_git-repositories-cache\nbamboo_repository_git_repositoryUrl=http://source.jalview.org/git/jalview.git\nbamboo_capability_system_builder_ant_Ant=/usr\nbamboo_capability_system_builder_mvn3_Maven_3=/usr/share/maven\nbamboo_tmp_directory=/srv/bamboo/bamboo-home/temp\nbamboo_working_directory=/srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1\nbamboo_planKey=JB-JB0\nbamboo_planRepository_1_repositoryUrl=http://source.jalview.org/git/jalview.git\nbamboo_planRepository_username=\nbamboo_repository_6258783_previous_revision_number=7a854962da5b44af995fa9dd6f4fb708d2b2036a\nbamboo_capability_system_jdk_JDK_1_8=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.171-8.b10.el7_5.x86_64\nbamboo_repository_6258783_revision_number=cfa118f7383e300235afb04ec0e093bf4e50b928\nbamboo_repository_6258783_name=Jalview Git\nbamboo_repository_6258783_git_branch=Jalview-JS/demo\nbamboo_planRepository_1_branchName=Jalview-JS/demo\nPATH=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.171-8.b10.el7_5.x86_64/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin\n build 26-Mar-2019 15:23:08 Buildfile: /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/build.xml build 26-Mar-2019 15:23:09 build 26-Mar-2019 15:23:09 init: build 26-Mar-2019 15:23:09 build 26-Mar-2019 15:23:09 prepare: build 26-Mar-2019 15:23:09 [mkdir] Created dir: /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/classes build 26-Mar-2019 15:23:09 [copy] Copying 286 files to /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/classes build 26-Mar-2019 15:23:09 build 26-Mar-2019 15:23:09 prepare-site: build 26-Mar-2019 15:23:09 build 26-Mar-2019 15:23:09 clean-site: build 26-Mar-2019 15:23:09 [delete] Deleting directory /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/site build 26-Mar-2019 15:23:10 [mkdir] Created dir: /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/site build 26-Mar-2019 15:23:10 build 26-Mar-2019 15:23:10 compile-site: build 26-Mar-2019 15:23:10 [copy] Copying 1 file to /home/bamboo/buildtools/eclipse/eclipse-js/dropins build 26-Mar-2019 15:23:13 [exec] HEAD is now at 3761485 upgraded Platform.java build 26-Mar-2019 15:23:16 [exec] From http://source.jalview.org/git/jalview build 26-Mar-2019 15:23:16 [exec] 7a85496..cfa118f Jalview-JS/demo -> origin/Jalview-JS/demo build 26-Mar-2019 15:23:16 [exec] e971149..904dafe bug/JAL-3215hydroColours -> origin/bug/JAL-3215hydroColours build 26-Mar-2019 15:23:16 [exec] You are not currently on a branch. Please specify which build 26-Mar-2019 15:23:16 [exec] branch you want to merge with. See git-pull(1) for details. build 26-Mar-2019 15:23:16 [exec] build 26-Mar-2019 15:23:16 [exec] git pull build 26-Mar-2019 15:23:16 [exec] build 26-Mar-2019 15:23:16 [exec] Result: 1 build 26-Mar-2019 15:23:18 [exec] Previous HEAD position was 3761485... upgraded Platform.java build 26-Mar-2019 15:23:18 [exec] HEAD is now at cfa118f... JAL-3026 reinstate test to classpath, fix compilation errors therein build 26-Mar-2019 15:23:18 [copy] Copying 1 file to /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js build 26-Mar-2019 15:23:18 [delete] Deleting: /home/bamboo/buildtools/eclipse/eclipse-js-workspace/.metadata/.log build 26-Mar-2019 15:23:55 [exec] org.eclipse.m2e.logback.configuration: The org.eclipse.m2e.logback.configuration bundle was activated before the state location was initialized. Will retry after the state location is initialized. build 26-Mar-2019 15:24:01 [exec] SLF4J: Class path contains multiple SLF4J bindings. build 26-Mar-2019 15:24:01 [exec] SLF4J: Found binding in [bundleresource://981.fwk1445157774:1/org/slf4j/impl/StaticLoggerBinder.class] build 26-Mar-2019 15:24:01 [exec] SLF4J: Found binding in [bundleresource://981.fwk1445157774:2/org/slf4j/impl/StaticLoggerBinder.class] build 26-Mar-2019 15:24:01 [exec] SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an explanation. build 26-Mar-2019 15:24:01 [exec] org.eclipse.m2e.logback.configuration: Logback config file: /home/bamboo/buildtools/eclipse/eclipse-js-workspace/.metadata/.plugins/org.eclipse.m2e.logback.configuration/logback.1.9.0.20180606-2036.xml build 26-Mar-2019 15:24:01 [exec] org.eclipse.m2e.logback.configuration: Initializing logback build 26-Mar-2019 15:24:01 [exec] SLF4J: Actual binding is of type [ch.qos.logback.classic.util.ContextSelectorStaticBinder] build 26-Mar-2019 15:24:04 [exec] Building workspace build 26-Mar-2019 15:24:04 [exec] Building '/RemoteSystemsTempFiles' build 26-Mar-2019 15:24:04 [exec] Building '/jalview-js' build 26-Mar-2019 15:24:04 [exec] Invoking 'Java Builder' on '/jalview-js'. build 26-Mar-2019 15:24:09 [exec] net.sf.j2s.core.3.2.4/3.2.4.06 started build 26-Mar-2019 15:24:09 [exec] CompilationParticipant started build 26-Mar-2019 15:24:09 [exec] isActive true /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js build 26-Mar-2019 15:24:09 [exec] aboutToBuild /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js build 26-Mar-2019 15:24:09 [exec] cleanStarting /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js build 26-Mar-2019 15:24:09 [exec] Cleaning output folder for jalview-js build 26-Mar-2019 15:24:10 [exec] Build done build 26-Mar-2019 15:24:10 [exec] Invoking 'Faceted Project Validation Builder' on '/jalview-js'. build 26-Mar-2019 15:24:10 [exec] Building workspace build 26-Mar-2019 15:24:10 [exec] Building '/.org.eclipse.jdt.core.external.folders' build 26-Mar-2019 15:24:10 [exec] Building '/RemoteSystemsTempFiles' build 26-Mar-2019 15:24:10 [exec] Building '/jalview-js' build 26-Mar-2019 15:24:10 [exec] Invoking 'Java Builder' on '/jalview-js'. build 26-Mar-2019 15:24:10 [exec] isActive true /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js build 26-Mar-2019 15:24:10 [exec] aboutToBuild /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js build 26-Mar-2019 15:24:10 [exec] Preparing to build jalview-js build 26-Mar-2019 15:24:10 [exec] Cleaning output folder for jalview-js build 26-Mar-2019 15:24:10 [exec] cleanStarting /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js build 26-Mar-2019 15:24:10 [exec] Copying resources to the output folder build 26-Mar-2019 15:24:10 [exec] Analyzing sources build 26-Mar-2019 15:24:10 [exec] buildStarting 964 files, isBatch=true build 26-Mar-2019 15:24:10 [exec] Compiling jalview-js/src/com/github/reinert/jjschema build 26-Mar-2019 15:24:11 [exec] j2s.compiler.status = enable build 26-Mar-2019 15:24:11 [exec] j2s.site.directory = null build 26-Mar-2019 15:24:11 [exec] j2s.log.methods.declared = null build 26-Mar-2019 15:24:11 [exec] j2s.log.methods.called = null build 26-Mar-2019 15:24:11 [exec] j2s.excluded.paths = test;testng;util build 26-Mar-2019 15:24:11 [exec] j2s.compiler.nonqualified.packages = null build 26-Mar-2019 15:24:11 [exec] j2s.compiler.nonqualified.classes = null build 26-Mar-2019 15:24:11 [exec] j2s.compiler.mode = null build 26-Mar-2019 15:24:11 [exec] j2s.class.replacements = org.apache.log4j.->jalview.javascript.log4j. build 26-Mar-2019 15:24:11 [exec] j2s.template.html = null build 26-Mar-2019 15:24:11 [exec] using HTML template /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/template.html build 26-Mar-2019 15:24:11 [exec] building JavaScript /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js build 26-Mar-2019 15:24:11 [exec] class replacement org.apache.log4j. --> jalview.javascript.log4j. build 26-Mar-2019 15:24:11 [exec] transpiling SourceFile[/jalview-js/src/com/github/reinert/jjschema/Attributes.java] build 26-Mar-2019 15:24:11 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/AmpersandRule.java] build 26-Mar-2019 15:24:11 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Any.java] build 26-Mar-2019 15:24:11 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/BackG.java] build 26-Mar-2019 15:24:11 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/BackMatch.java] build 26-Mar-2019 15:24:11 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/BackRefRule.java] build 26-Mar-2019 15:24:11 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Backup.java] build 26-Mar-2019 15:24:11 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/BasicStringBufferLike.java] build 26-Mar-2019 15:24:11 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Bits.java] build 26-Mar-2019 15:24:11 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Boundary.java] build 26-Mar-2019 15:24:11 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Bracket.java] build 26-Mar-2019 15:24:11 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/CaseMgr.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/ChangeRule.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/CodeRule.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Ctrl.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Custom.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/CustomEndpoint.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/DirFileRegex.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/DotMulti.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/End.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/FastBracket.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/FastMulti.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/FileRegex.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Group.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/LeftRule.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Multi.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/MultiMin.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Multi_stage2.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/NoPattern.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/NonDirFileRegex.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/NotImplementedError.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/NullPattern.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/NullRule.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Or.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/OrMark.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/PartialBuffer.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Pattern.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/PatternSub.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/PopRule.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Prop.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Pthings.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/PushRule.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/RBuffer.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Range.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/RegOpt.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/RegRes.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/RegSyntax.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/RegSyntaxError.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Regex.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/RegexReader.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/RegexTokenizer.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/RegexWriter.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/ReplaceRule.java] build 26-Mar-2019 15:24:12 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Replacer.java] build 26-Mar-2019 15:24:13 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/RightRule.java] build 26-Mar-2019 15:24:13 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Rthings.java] build 26-Mar-2019 15:24:13 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/RuleHolder.java] build 26-Mar-2019 15:24:13 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Skip.java] build 26-Mar-2019 15:24:13 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Skip2.java] build 26-Mar-2019 15:24:13 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/SkipBMH.java] build 26-Mar-2019 15:24:13 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Skipped.java] build 26-Mar-2019 15:24:13 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/SpecialRule.java] build 26-Mar-2019 15:24:13 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Start.java] build 26-Mar-2019 15:24:13 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/StrPos.java] build 26-Mar-2019 15:24:13 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/StringBufferLike.java] build 26-Mar-2019 15:24:13 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/StringLike.java] build 26-Mar-2019 15:24:13 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/StringRule.java] build 26-Mar-2019 15:24:13 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/SubMark.java] build 26-Mar-2019 15:24:13 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/TransPat.java] build 26-Mar-2019 15:24:13 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Transformer.java] build 26-Mar-2019 15:24:13 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/UniValidator.java] build 26-Mar-2019 15:24:13 [exec] transpiling 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SourceFile[/jalview-js/src/jalview/appletgui/SplitFrame.java] build 26-Mar-2019 15:24:18 [exec] Java2Script creating /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/site/jalview_appletgui_TitledPanel.html build 26-Mar-2019 15:24:18 [exec] transpiling SourceFile[/jalview-js/src/jalview/appletgui/TitledPanel.java] build 26-Mar-2019 15:24:18 [exec] transpiling SourceFile[/jalview-js/src/jalview/appletgui/Tooltip.java] build 26-Mar-2019 15:24:18 [exec] transpiling SourceFile[/jalview-js/src/jalview/appletgui/TreeCanvas.java] build 26-Mar-2019 15:24:18 [exec] transpiling SourceFile[/jalview-js/src/jalview/appletgui/TreePanel.java] build 26-Mar-2019 15:24:18 [exec] transpiling SourceFile[/jalview-js/src/jalview/appletgui/UserDefinedColours.java] build 26-Mar-2019 15:24:19 [exec] transpiling SourceFile[/jalview-js/src/jalview/bin/ArgsParser.java] build 26-Mar-2019 15:24:19 [exec] transpiling SourceFile[/jalview-js/src/jalview/bin/BuildDetails.java] build 26-Mar-2019 15:24:19 [exec] transpiling SourceFile[/jalview-js/src/jalview/bin/Cache.java] build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.ConsoleAppender -> jalview.javascript.log4j.ConsoleAppender build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.ConsoleAppender -> jalview.javascript.log4j.ConsoleAppender build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.ConsoleAppender -> jalview.javascript.log4j.ConsoleAppender build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Layout -> jalview.javascript.log4j.Layout build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.SimpleLayout -> jalview.javascript.log4j.SimpleLayout build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.SimpleLayout -> jalview.javascript.log4j.SimpleLayout build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.SimpleLayout -> jalview.javascript.log4j.SimpleLayout build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Logger -> jalview.javascript.log4j.Logger build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Appender -> jalview.javascript.log4j.Appender build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Logger -> jalview.javascript.log4j.Logger build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Logger -> jalview.javascript.log4j.Logger build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Logger -> jalview.javascript.log4j.Logger build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Logger -> jalview.javascript.log4j.Logger build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Logger -> jalview.javascript.log4j.Logger build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Appender -> jalview.javascript.log4j.Appender build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Logger -> jalview.javascript.log4j.Logger build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Level -> jalview.javascript.log4j.Level build 26-Mar-2019 15:24:19 [exec] org.apache.log4j.Appender -> jalview.javascript.log4j.Appender build 26-Mar-2019 15:24:19 [exec] transpiling SourceFile[/jalview-js/src/jalview/bin/Jalview.java] build 26-Mar-2019 15:24:19 [exec] Java2Script creating /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/site/jalview_bin_Jalview.html build 26-Mar-2019 15:24:19 [exec] transpiling SourceFile[/jalview-js/src/jalview/bin/JalviewJS2.java] build 26-Mar-2019 15:24:19 [exec] transpiling SourceFile[/jalview-js/src/jalview/bin/JalviewLite.java] build 26-Mar-2019 15:24:19 [exec] Java2Script creating /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/site/jalview_bin_JalviewLite_applet.html build 26-Mar-2019 15:24:19 [exec] transpiling SourceFile[/jalview-js/src/jalview/bin/JalviewLiteURLRetrieve.java] build 26-Mar-2019 15:24:19 [exec] transpiling SourceFile[/jalview-js/src/jalview/commands/ChangeCaseCommand.java] build 26-Mar-2019 15:24:19 [exec] transpiling SourceFile[/jalview-js/src/jalview/commands/CommandI.java] build 26-Mar-2019 15:24:19 [exec] transpiling SourceFile[/jalview-js/src/jalview/commands/EditCommand.java] build 26-Mar-2019 15:24:19 [exec] Java2Script creating /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/site/jalview_bin_JalviewLiteURLRetrieve_applet.html build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/commands/OrderCommand.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/commands/RemoveGapColCommand.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/commands/RemoveGapsCommand.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/commands/SlideSequencesCommand.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/commands/TrimRegionCommand.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/controller/AlignViewController.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/controller/FeatureSettingsController.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/controller/FeatureSettingsControllerGuiI.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/ASequence.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/ASequenceI.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/AlignExportSettingsAdapter.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/AlignedCodon.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/AlignedCodonFrame.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/Alignment.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/AlignmentAnnotation.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/AlignmentExportData.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/AlignmentI.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/AlignmentOrder.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/AlignmentView.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/AllColsCollection.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/AllColsIterator.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/AllRowsCollection.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/AllRowsIterator.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/AnnotatedCollectionI.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/Annotation.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/BinaryNode.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/BinarySequence.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/CigarArray.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/CigarBase.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/CigarCigar.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/CigarSimple.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/ColumnSelection.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/ContiguousI.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/DBRefEntry.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/DBRefSource.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/FeatureProperties.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/GeneLociI.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/GraphLine.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/HiddenColumns.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/HiddenColumnsCursor.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/HiddenCursorPosition.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/HiddenSequences.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/IncompleteCodonException.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/Mapping.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/MappingType.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/NodeTransformI.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/PDBEntry.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/Point.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/Profile.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/ProfileI.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/Profiles.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/ProfilesI.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/Provenance.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/ProvenanceEntry.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/Range.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/RangeElementsIterator.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/RangeIterator.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/ResidueCount.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/RnaViewerModel.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/SearchResultMatchI.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/SearchResults.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/SearchResultsI.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/SecondaryStructureAnnotation.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/SeqCigar.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/Sequence.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/SequenceCollectionI.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/SequenceCursor.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/SequenceDummy.java] build 26-Mar-2019 15:24:20 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/SequenceFeature.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/SequenceGroup.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/SequenceI.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/SequenceNode.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/SequencePoint.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/StartRegionIterator.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/StructureViewerModel.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/VisibleColsCollection.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/VisibleContigsIterator.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/VisibleRowsCollection.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/VisibleRowsIterator.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/features/FeatureAttributeType.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/features/FeatureAttributes.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/features/FeatureLocationI.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/features/FeatureMatcher.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/features/FeatureMatcherI.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/features/FeatureMatcherSet.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/features/FeatureMatcherSetI.java] build 26-Mar-2019 15:24:21 [exec] java.lang.NullPointerException build 26-Mar-2019 15:24:21 [exec] at net.sf.j2s.core.Java2ScriptVisitor.getFinalFieldName(Java2ScriptVisitor.java:5699) build 26-Mar-2019 15:24:21 [exec] at net.sf.j2s.core.Java2ScriptVisitor.addFieldDeclaration(Java2ScriptVisitor.java:2217) build 26-Mar-2019 15:24:21 [exec] at net.sf.j2s.core.Java2ScriptVisitor.addClassOrInterface(Java2ScriptVisitor.java:1957) build 26-Mar-2019 15:24:21 [exec] at net.sf.j2s.core.Java2ScriptVisitor.visit(Java2ScriptVisitor.java:1510) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.jdt.core.dom.TypeDeclaration.accept0(TypeDeclaration.java:427) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.jdt.core.dom.ASTNode.accept(ASTNode.java:2797) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.jdt.core.dom.ASTNode.acceptChildren(ASTNode.java:2868) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.jdt.core.dom.CompilationUnit.accept0(CompilationUnit.java:255) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.jdt.core.dom.ASTNode.accept(ASTNode.java:2797) build 26-Mar-2019 15:24:21 [exec] at net.sf.j2s.core.Java2ScriptCompiler.compileToJavaScript(Java2ScriptCompiler.java:258) build 26-Mar-2019 15:24:21 [exec] at net.sf.j2s.core.Java2ScriptCompilationParticipant.buildFinished(Java2ScriptCompilationParticipant.java:117) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.jdt.internal.core.builder.JavaBuilder.build(JavaBuilder.java:237) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 26-Mar-2019 15:24:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 26-Mar-2019 15:24:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 26-Mar-2019 15:24:21 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 26-Mar-2019 15:24:21 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/features/FeatureSource.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/features/FeatureSourceI.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/features/FeatureSources.java] build 26-Mar-2019 15:24:21 [exec] transpiling SourceFile[/jalview-js/src/jalview/datamodel/features/FeatureStore.java] build 26-Mar-2019 15:24:21 [exec] java.lang.NullPointerException build 26-Mar-2019 15:24:21 [exec] at net.sf.j2s.core.Java2ScriptVisitor.getFinalFieldName(Java2ScriptVisitor.java:5699) build 26-Mar-2019 15:24:21 [exec] at net.sf.j2s.core.Java2ScriptVisitor.addFieldDeclaration(Java2ScriptVisitor.java:2217) build 26-Mar-2019 15:24:21 [exec] at net.sf.j2s.core.Java2ScriptVisitor.addClassOrInterface(Java2ScriptVisitor.java:1957) build 26-Mar-2019 15:24:21 [exec] at net.sf.j2s.core.Java2ScriptVisitor.visit(Java2ScriptVisitor.java:1510) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.jdt.core.dom.TypeDeclaration.accept0(TypeDeclaration.java:427) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.jdt.core.dom.ASTNode.accept(ASTNode.java:2797) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.jdt.core.dom.ASTNode.acceptChildren(ASTNode.java:2868) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.jdt.core.dom.CompilationUnit.accept0(CompilationUnit.java:255) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.jdt.core.dom.ASTNode.accept(ASTNode.java:2797) build 26-Mar-2019 15:24:21 [exec] at net.sf.j2s.core.Java2ScriptCompiler.compileToJavaScript(Java2ScriptCompiler.java:258) build 26-Mar-2019 15:24:21 [exec] at net.sf.j2s.core.Java2ScriptCompilationParticipant.buildFinished(Java2ScriptCompilationParticipant.java:117) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.jdt.internal.core.builder.JavaBuilder.build(JavaBuilder.java:237) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 26-Mar-2019 15:24:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 26-Mar-2019 15:24:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 26-Mar-2019 15:24:21 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 26-Mar-2019 15:24:21 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 26-Mar-2019 15:24:21 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 26-Mar-2019 15:24:21 [exec] Error processing L/jalview-js/src/jalview/datamodel/features/FeatureStore.java build 26-Mar-2019 15:24:21 [exec] build finished /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js build 26-Mar-2019 15:24:21 [exec] Build done build 26-Mar-2019 15:24:21 [exec] Invoking 'Faceted Project Validation Builder' on '/jalview-js'. build 26-Mar-2019 15:24:21 [exec] Validating faceted project... build 26-Mar-2019 15:24:21 [exec] Invoking 'Integrated External Tool Builder' on '/jalview-js'. build 26-Mar-2019 15:24:22 [exec] Running Jalview Release indices [Builder]... build 26-Mar-2019 15:24:22 [exec] Preparing launch delegate... build 26-Mar-2019 15:24:22 [exec] Performing pre-launch check... build 26-Mar-2019 15:24:22 [exec] Performing final launch validation... build 26-Mar-2019 15:24:22 [exec] Initializing source locator... build 26-Mar-2019 15:24:22 [exec] Launching delegate... build 26-Mar-2019 15:24:24 [exec] Eclipse: build 26-Mar-2019 15:24:24 [exec] An error has occurred. See the log file build 26-Mar-2019 15:24:24 [exec] /home/bamboo/buildtools/eclipse/eclipse-js-workspace/.metadata/.log. build 26-Mar-2019 15:24:25 [exec] Result: 13 build 26-Mar-2019 15:24:25 [exec] !SESSION 2019-03-26 15:23:19.103 ----------------------------------------------- build 26-Mar-2019 15:24:25 [exec] eclipse.buildId=4.8.0.I20180611-0500 build 26-Mar-2019 15:24:25 [exec] java.version=1.8.0_171 build 26-Mar-2019 15:24:25 [exec] java.vendor=Oracle Corporation build 26-Mar-2019 15:24:25 [exec] BootLoader constants: OS=linux, ARCH=x86_64, WS=gtk, NL=en_GB build 26-Mar-2019 15:24:25 [exec] Framework arguments: -product org.eclipse.epp.package.jee.product -application org.eclipse.jdt.apt.core.aptBuild build 26-Mar-2019 15:24:25 [exec] Command-line arguments: -os linux -ws gtk -arch x86_64 -product org.eclipse.epp.package.jee.product -clean -application org.eclipse.jdt.apt.core.aptBuild -data /home/bamboo/buildtools/eclipse/eclipse-js-workspace build 26-Mar-2019 15:24:25 [exec] build 26-Mar-2019 15:24:25 [exec] !ENTRY org.eclipse.core.resources 2 10035 2019-03-26 15:23:55.470 build 26-Mar-2019 15:24:25 [exec] !MESSAGE The workspace exited with unsaved changes in the previous session; refreshing workspace to recover changes. build 26-Mar-2019 15:24:25 [exec] build 26-Mar-2019 15:24:25 [exec] !ENTRY org.eclipse.egit.core 2 0 2019-03-26 15:24:03.808 build 26-Mar-2019 15:24:25 [exec] !MESSAGE Builtin LFS support not present/detected build 26-Mar-2019 15:24:25 [exec] !STACK 0 build 26-Mar-2019 15:24:25 [exec] java.lang.ClassNotFoundException: org.eclipse.jgit.lfs.BuiltinLFS cannot be found by org.eclipse.egit.core_5.0.0.201806131550-r build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:508) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:419) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:411) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:150) build 26-Mar-2019 15:24:25 [exec] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) build 26-Mar-2019 15:24:25 [exec] at java.lang.Class.forName0(Native Method) build 26-Mar-2019 15:24:25 [exec] at java.lang.Class.forName(Class.java:264) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.egit.core.Activator.registerBuiltinLFS(Activator.java:279) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.egit.core.Activator.start(Activator.java:212) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:779) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:1) build 26-Mar-2019 15:24:25 [exec] at java.security.AccessController.doPrivileged(Native Method) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:772) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.start(BundleContextImpl.java:729) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.startWorker0(EquinoxBundle.java:1002) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle$EquinoxModule.startWorker(EquinoxBundle.java:354) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.container.Module.doStart(Module.java:581) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.container.Module.start(Module.java:449) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.framework.util.SecureAction.start(SecureAction.java:468) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:114) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.classpath.ClasspathManager.findLocalClass(ClasspathManager.java:505) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.findLocalClass(ModuleClassLoader.java:328) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findLocalClass(BundleLoader.java:392) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:470) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:419) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:411) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:150) build 26-Mar-2019 15:24:25 [exec] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.loadClass(EquinoxBundle.java:609) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:177) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ExtensionRegistry.createExecutableExtension(ExtensionRegistry.java:931) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ConfigurationElement.createExecutableExtension(ConfigurationElement.java:243) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ConfigurationElementHandle.createExecutableExtension(ConfigurationElementHandle.java:60) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.team.core.RepositoryProvider.newProvider(RepositoryProvider.java:707) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.team.core.RepositoryProvider.mapNewProvider(RepositoryProvider.java:162) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.team.core.RepositoryProvider.mapExistingProvider(RepositoryProvider.java:233) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.team.core.RepositoryProvider.getProvider(RepositoryProvider.java:510) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.team.internal.core.TeamHookDispatcher.getProvider(TeamHookDispatcher.java:89) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.team.internal.core.TeamHookDispatcher.getRuleFactory(TeamHookDispatcher.java:95) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Rules.factoryFor(Rules.java:98) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Rules.refreshRule(Rules.java:175) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Resource.refreshLocal(Resource.java:1537) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.refresh.RefreshJob.runInWorkspace(RefreshJob.java:163) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.InternalWorkspaceJob.run(InternalWorkspaceJob.java:39) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.jobs.Worker.run(Worker.java:60) build 26-Mar-2019 15:24:25 [exec] build 26-Mar-2019 15:24:25 [exec] !ENTRY org.eclipse.jdt.core 4 4 2019-03-26 15:24:15.303 build 26-Mar-2019 15:24:25 [exec] !MESSAGE File not found: '/jalview-js/src/jalview/analysis/GeneticCodeI.java' build 26-Mar-2019 15:24:25 [exec] !STACK 1 build 26-Mar-2019 15:24:25 [exec] org.eclipse.core.internal.resources.ResourceException(/jalview-js/src/jalview/analysis/GeneticCodeI.java)[368]: java.lang.Exception: File not found: /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/src/jalview/analysis/GeneticCodeI.java. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.ResourceException.provideStackTrace(ResourceException.java:39) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.ResourceException.(ResourceException.java:35) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.localstore.FileSystemResourceManager.read(FileSystemResourceManager.java:830) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.File.getContents(File.java:277) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.util.Util.getResourceContentsAsCharArray(Util.java:1204) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.CompilationUnit.getContents(CompilationUnit.java:679) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.core.dom.ASTParser.internalCreateAST(ASTParser.java:1135) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.core.dom.ASTParser.createAST(ASTParser.java:823) build 26-Mar-2019 15:24:25 [exec] at net.sf.j2s.core.Java2ScriptCompiler.compileToJavaScript(Java2ScriptCompiler.java:249) build 26-Mar-2019 15:24:25 [exec] at net.sf.j2s.core.Java2ScriptCompilationParticipant.buildFinished(Java2ScriptCompilationParticipant.java:117) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.builder.JavaBuilder.build(JavaBuilder.java:237) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 26-Mar-2019 15:24:25 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 26-Mar-2019 15:24:25 [exec] !SUBENTRY 1 org.eclipse.core.resources 4 368 2019-03-26 15:24:15.304 build 26-Mar-2019 15:24:25 [exec] !MESSAGE File not found: /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/src/jalview/analysis/GeneticCodeI.java. build 26-Mar-2019 15:24:25 [exec] !STACK 0 build 26-Mar-2019 15:24:25 [exec] java.lang.Exception: File not found: /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/src/jalview/analysis/GeneticCodeI.java. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.ResourceException.provideStackTrace(ResourceException.java:39) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.ResourceException.(ResourceException.java:35) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.localstore.FileSystemResourceManager.read(FileSystemResourceManager.java:830) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.File.getContents(File.java:277) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.util.Util.getResourceContentsAsCharArray(Util.java:1204) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.CompilationUnit.getContents(CompilationUnit.java:679) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.core.dom.ASTParser.internalCreateAST(ASTParser.java:1135) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.core.dom.ASTParser.createAST(ASTParser.java:823) build 26-Mar-2019 15:24:25 [exec] at net.sf.j2s.core.Java2ScriptCompiler.compileToJavaScript(Java2ScriptCompiler.java:249) build 26-Mar-2019 15:24:25 [exec] at net.sf.j2s.core.Java2ScriptCompilationParticipant.buildFinished(Java2ScriptCompilationParticipant.java:117) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.builder.JavaBuilder.build(JavaBuilder.java:237) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 26-Mar-2019 15:24:25 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 26-Mar-2019 15:24:25 [exec] build 26-Mar-2019 15:24:25 [exec] !ENTRY org.eclipse.jdt.core 4 4 2019-03-26 15:24:15.305 build 26-Mar-2019 15:24:25 [exec] !MESSAGE File not found: '/jalview-js/src/jalview/analysis/GeneticCodes.java' build 26-Mar-2019 15:24:25 [exec] !STACK 1 build 26-Mar-2019 15:24:25 [exec] org.eclipse.core.internal.resources.ResourceException(/jalview-js/src/jalview/analysis/GeneticCodes.java)[368]: java.lang.Exception: File not found: /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/src/jalview/analysis/GeneticCodes.java. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.ResourceException.provideStackTrace(ResourceException.java:39) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.ResourceException.(ResourceException.java:35) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.localstore.FileSystemResourceManager.read(FileSystemResourceManager.java:830) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.File.getContents(File.java:277) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.util.Util.getResourceContentsAsCharArray(Util.java:1204) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.CompilationUnit.getContents(CompilationUnit.java:679) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.core.dom.ASTParser.internalCreateAST(ASTParser.java:1135) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.core.dom.ASTParser.createAST(ASTParser.java:823) build 26-Mar-2019 15:24:25 [exec] at net.sf.j2s.core.Java2ScriptCompiler.compileToJavaScript(Java2ScriptCompiler.java:249) build 26-Mar-2019 15:24:25 [exec] at net.sf.j2s.core.Java2ScriptCompilationParticipant.buildFinished(Java2ScriptCompilationParticipant.java:117) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.builder.JavaBuilder.build(JavaBuilder.java:237) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 26-Mar-2019 15:24:25 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 26-Mar-2019 15:24:25 [exec] !SUBENTRY 1 org.eclipse.core.resources 4 368 2019-03-26 15:24:15.305 build 26-Mar-2019 15:24:25 [exec] !MESSAGE File not found: /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/src/jalview/analysis/GeneticCodes.java. build 26-Mar-2019 15:24:25 [exec] !STACK 0 build 26-Mar-2019 15:24:25 [exec] java.lang.Exception: File not found: /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/src/jalview/analysis/GeneticCodes.java. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.ResourceException.provideStackTrace(ResourceException.java:39) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.ResourceException.(ResourceException.java:35) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.localstore.FileSystemResourceManager.read(FileSystemResourceManager.java:830) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.File.getContents(File.java:277) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.util.Util.getResourceContentsAsCharArray(Util.java:1204) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.CompilationUnit.getContents(CompilationUnit.java:679) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.core.dom.ASTParser.internalCreateAST(ASTParser.java:1135) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.core.dom.ASTParser.createAST(ASTParser.java:823) build 26-Mar-2019 15:24:25 [exec] at net.sf.j2s.core.Java2ScriptCompiler.compileToJavaScript(Java2ScriptCompiler.java:249) build 26-Mar-2019 15:24:25 [exec] at net.sf.j2s.core.Java2ScriptCompilationParticipant.buildFinished(Java2ScriptCompilationParticipant.java:117) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.builder.JavaBuilder.build(JavaBuilder.java:237) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 26-Mar-2019 15:24:25 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 26-Mar-2019 15:24:25 [exec] build 26-Mar-2019 15:24:25 [exec] !ENTRY org.eclipse.jdt.core 4 4 2019-03-26 15:24:15.849 build 26-Mar-2019 15:24:25 [exec] !MESSAGE File not found: '/jalview-js/src/jalview/api/FinderI.java' build 26-Mar-2019 15:24:25 [exec] !STACK 1 build 26-Mar-2019 15:24:25 [exec] org.eclipse.core.internal.resources.ResourceException(/jalview-js/src/jalview/api/FinderI.java)[368]: java.lang.Exception: File not found: /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/src/jalview/api/FinderI.java. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.ResourceException.provideStackTrace(ResourceException.java:39) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.ResourceException.(ResourceException.java:35) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.localstore.FileSystemResourceManager.read(FileSystemResourceManager.java:830) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.File.getContents(File.java:277) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.util.Util.getResourceContentsAsCharArray(Util.java:1204) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.CompilationUnit.getContents(CompilationUnit.java:679) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.core.dom.ASTParser.internalCreateAST(ASTParser.java:1135) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.core.dom.ASTParser.createAST(ASTParser.java:823) build 26-Mar-2019 15:24:25 [exec] at net.sf.j2s.core.Java2ScriptCompiler.compileToJavaScript(Java2ScriptCompiler.java:249) build 26-Mar-2019 15:24:25 [exec] at net.sf.j2s.core.Java2ScriptCompilationParticipant.buildFinished(Java2ScriptCompilationParticipant.java:117) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.builder.JavaBuilder.build(JavaBuilder.java:237) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 26-Mar-2019 15:24:25 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 26-Mar-2019 15:24:25 [exec] !SUBENTRY 1 org.eclipse.core.resources 4 368 2019-03-26 15:24:15.849 build 26-Mar-2019 15:24:25 [exec] !MESSAGE File not found: /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/src/jalview/api/FinderI.java. build 26-Mar-2019 15:24:25 [exec] !STACK 0 build 26-Mar-2019 15:24:25 [exec] java.lang.Exception: File not found: /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/src/jalview/api/FinderI.java. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.ResourceException.provideStackTrace(ResourceException.java:39) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.ResourceException.(ResourceException.java:35) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.localstore.FileSystemResourceManager.read(FileSystemResourceManager.java:830) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.File.getContents(File.java:277) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.util.Util.getResourceContentsAsCharArray(Util.java:1204) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.CompilationUnit.getContents(CompilationUnit.java:679) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.core.dom.ASTParser.internalCreateAST(ASTParser.java:1135) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.core.dom.ASTParser.createAST(ASTParser.java:823) build 26-Mar-2019 15:24:25 [exec] at net.sf.j2s.core.Java2ScriptCompiler.compileToJavaScript(Java2ScriptCompiler.java:249) build 26-Mar-2019 15:24:25 [exec] at net.sf.j2s.core.Java2ScriptCompilationParticipant.buildFinished(Java2ScriptCompilationParticipant.java:117) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.builder.JavaBuilder.build(JavaBuilder.java:237) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 26-Mar-2019 15:24:25 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 26-Mar-2019 15:24:25 [exec] build 26-Mar-2019 15:24:25 [exec] !ENTRY org.eclipse.jdt.core 4 4 2019-03-26 15:24:20.720 build 26-Mar-2019 15:24:25 [exec] !MESSAGE File not found: '/jalview-js/src/jalview/datamodel/Point.java' build 26-Mar-2019 15:24:25 [exec] !STACK 1 build 26-Mar-2019 15:24:25 [exec] org.eclipse.core.internal.resources.ResourceException(/jalview-js/src/jalview/datamodel/Point.java)[368]: java.lang.Exception: File not found: /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/src/jalview/datamodel/Point.java. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.ResourceException.provideStackTrace(ResourceException.java:39) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.ResourceException.(ResourceException.java:35) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.localstore.FileSystemResourceManager.read(FileSystemResourceManager.java:830) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.File.getContents(File.java:277) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.util.Util.getResourceContentsAsCharArray(Util.java:1204) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.CompilationUnit.getContents(CompilationUnit.java:679) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.core.dom.ASTParser.internalCreateAST(ASTParser.java:1135) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.core.dom.ASTParser.createAST(ASTParser.java:823) build 26-Mar-2019 15:24:25 [exec] at net.sf.j2s.core.Java2ScriptCompiler.compileToJavaScript(Java2ScriptCompiler.java:249) build 26-Mar-2019 15:24:25 [exec] at net.sf.j2s.core.Java2ScriptCompilationParticipant.buildFinished(Java2ScriptCompilationParticipant.java:117) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.builder.JavaBuilder.build(JavaBuilder.java:237) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 26-Mar-2019 15:24:25 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 26-Mar-2019 15:24:25 [exec] !SUBENTRY 1 org.eclipse.core.resources 4 368 2019-03-26 15:24:20.721 build 26-Mar-2019 15:24:25 [exec] !MESSAGE File not found: /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/src/jalview/datamodel/Point.java. build 26-Mar-2019 15:24:25 [exec] !STACK 0 build 26-Mar-2019 15:24:25 [exec] java.lang.Exception: File not found: /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/src/jalview/datamodel/Point.java. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.ResourceException.provideStackTrace(ResourceException.java:39) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.ResourceException.(ResourceException.java:35) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.localstore.FileSystemResourceManager.read(FileSystemResourceManager.java:830) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.File.getContents(File.java:277) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.util.Util.getResourceContentsAsCharArray(Util.java:1204) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.CompilationUnit.getContents(CompilationUnit.java:679) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.core.dom.ASTParser.internalCreateAST(ASTParser.java:1135) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.core.dom.ASTParser.createAST(ASTParser.java:823) build 26-Mar-2019 15:24:25 [exec] at net.sf.j2s.core.Java2ScriptCompiler.compileToJavaScript(Java2ScriptCompiler.java:249) build 26-Mar-2019 15:24:25 [exec] at net.sf.j2s.core.Java2ScriptCompilationParticipant.buildFinished(Java2ScriptCompilationParticipant.java:117) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.internal.core.builder.JavaBuilder.build(JavaBuilder.java:237) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 26-Mar-2019 15:24:25 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 26-Mar-2019 15:24:25 [exec] build 26-Mar-2019 15:24:25 [exec] !ENTRY org.eclipse.osgi 4 0 2019-03-26 15:24:22.304 build 26-Mar-2019 15:24:25 [exec] !MESSAGE An error occurred while automatically activating bundle org.eclipse.ui.externaltools (786). build 26-Mar-2019 15:24:25 [exec] !STACK 0 build 26-Mar-2019 15:24:25 [exec] org.osgi.framework.BundleException: Exception in org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start() of bundle org.eclipse.ui.externaltools. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:800) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.start(BundleContextImpl.java:729) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.startWorker0(EquinoxBundle.java:1002) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle$EquinoxModule.startWorker(EquinoxBundle.java:354) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.container.Module.doStart(Module.java:581) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.container.Module.start(Module.java:449) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.framework.util.SecureAction.start(SecureAction.java:468) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:114) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.classpath.ClasspathManager.findLocalClass(ClasspathManager.java:505) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.findLocalClass(ModuleClassLoader.java:328) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findLocalClass(BundleLoader.java:392) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:470) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:419) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:411) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:150) build 26-Mar-2019 15:24:25 [exec] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.loadClass(EquinoxBundle.java:609) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:177) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ExtensionRegistry.createExecutableExtension(ExtensionRegistry.java:931) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ConfigurationElement.createExecutableExtension(ConfigurationElement.java:243) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ConfigurationElementHandle.createExecutableExtension(ConfigurationElementHandle.java:60) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.DynamicVariable.getValue(DynamicVariable.java:48) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.resolve(StringSubstitutionEngine.java:269) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.substitute(StringSubstitutionEngine.java:192) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.performStringSubstitution(StringSubstitutionEngine.java:87) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:358) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.launchConfigurations.ExternalToolsCoreUtil.getLocation(ExternalToolsCoreUtil.java:73) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ant.internal.launching.launchConfigurations.AntLaunchDelegate.launch(AntLaunchDelegate.java:161) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:859) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:717) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:712) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.launchBuild(ExternalToolBuilder.java:183) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.doBuildBasedOnScope(ExternalToolBuilder.java:171) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.build(ExternalToolBuilder.java:90) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 26-Mar-2019 15:24:25 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 26-Mar-2019 15:24:25 [exec] Caused by: java.lang.IllegalStateException: Workbench has not been created yet. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ui.PlatformUI.getWorkbench(PlatformUI.java:93) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start(ExternalToolsPlugin.java:254) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:779) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:1) build 26-Mar-2019 15:24:25 [exec] at java.security.AccessController.doPrivileged(Native Method) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:772) build 26-Mar-2019 15:24:25 [exec] ... 59 more build 26-Mar-2019 15:24:25 [exec] Root exception: build 26-Mar-2019 15:24:25 [exec] java.lang.IllegalStateException: Workbench has not been created yet. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ui.PlatformUI.getWorkbench(PlatformUI.java:93) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start(ExternalToolsPlugin.java:254) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:779) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:1) build 26-Mar-2019 15:24:25 [exec] at java.security.AccessController.doPrivileged(Native Method) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:772) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.start(BundleContextImpl.java:729) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.startWorker0(EquinoxBundle.java:1002) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle$EquinoxModule.startWorker(EquinoxBundle.java:354) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.container.Module.doStart(Module.java:581) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.container.Module.start(Module.java:449) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.framework.util.SecureAction.start(SecureAction.java:468) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:114) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.classpath.ClasspathManager.findLocalClass(ClasspathManager.java:505) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.findLocalClass(ModuleClassLoader.java:328) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findLocalClass(BundleLoader.java:392) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:470) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:419) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:411) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:150) build 26-Mar-2019 15:24:25 [exec] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.loadClass(EquinoxBundle.java:609) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:177) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ExtensionRegistry.createExecutableExtension(ExtensionRegistry.java:931) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ConfigurationElement.createExecutableExtension(ConfigurationElement.java:243) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ConfigurationElementHandle.createExecutableExtension(ConfigurationElementHandle.java:60) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.DynamicVariable.getValue(DynamicVariable.java:48) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.resolve(StringSubstitutionEngine.java:269) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.substitute(StringSubstitutionEngine.java:192) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.performStringSubstitution(StringSubstitutionEngine.java:87) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:358) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.launchConfigurations.ExternalToolsCoreUtil.getLocation(ExternalToolsCoreUtil.java:73) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ant.internal.launching.launchConfigurations.AntLaunchDelegate.launch(AntLaunchDelegate.java:161) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:859) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:717) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:712) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.launchBuild(ExternalToolBuilder.java:183) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.doBuildBasedOnScope(ExternalToolBuilder.java:171) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.build(ExternalToolBuilder.java:90) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 26-Mar-2019 15:24:25 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 26-Mar-2019 15:24:25 [exec] build 26-Mar-2019 15:24:25 [exec] !ENTRY org.eclipse.core.resources 4 2 2019-03-26 15:24:22.344 build 26-Mar-2019 15:24:25 [exec] !MESSAGE Problems occurred when invoking code from plug-in: "org.eclipse.core.resources". build 26-Mar-2019 15:24:25 [exec] !STACK 1 build 26-Mar-2019 15:24:25 [exec] org.eclipse.core.runtime.CoreException: Plug-in org.eclipse.ui.externaltools was unable to load class org.eclipse.ui.externaltools.internal.variables.BuildProjectResolver. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.throwException(RegistryStrategyOSGI.java:197) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:179) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ExtensionRegistry.createExecutableExtension(ExtensionRegistry.java:931) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ConfigurationElement.createExecutableExtension(ConfigurationElement.java:243) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ConfigurationElementHandle.createExecutableExtension(ConfigurationElementHandle.java:60) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.DynamicVariable.getValue(DynamicVariable.java:48) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.resolve(StringSubstitutionEngine.java:269) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.substitute(StringSubstitutionEngine.java:192) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.performStringSubstitution(StringSubstitutionEngine.java:87) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:358) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.launchConfigurations.ExternalToolsCoreUtil.getLocation(ExternalToolsCoreUtil.java:73) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ant.internal.launching.launchConfigurations.AntLaunchDelegate.launch(AntLaunchDelegate.java:161) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:859) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:717) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:712) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.launchBuild(ExternalToolBuilder.java:183) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.doBuildBasedOnScope(ExternalToolBuilder.java:171) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.build(ExternalToolBuilder.java:90) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 26-Mar-2019 15:24:25 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 26-Mar-2019 15:24:25 [exec] Caused by: java.lang.ClassNotFoundException: An error occurred while automatically activating bundle org.eclipse.ui.externaltools (786). build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:123) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.classpath.ClasspathManager.findLocalClass(ClasspathManager.java:505) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.findLocalClass(ModuleClassLoader.java:328) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findLocalClass(BundleLoader.java:392) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:470) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:419) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:411) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:150) build 26-Mar-2019 15:24:25 [exec] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.loadClass(EquinoxBundle.java:609) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:177) build 26-Mar-2019 15:24:25 [exec] ... 42 more build 26-Mar-2019 15:24:25 [exec] Caused by: org.osgi.framework.BundleException: Exception in org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start() of bundle org.eclipse.ui.externaltools. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:800) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.start(BundleContextImpl.java:729) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.startWorker0(EquinoxBundle.java:1002) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle$EquinoxModule.startWorker(EquinoxBundle.java:354) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.container.Module.doStart(Module.java:581) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.container.Module.start(Module.java:449) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.framework.util.SecureAction.start(SecureAction.java:468) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:114) build 26-Mar-2019 15:24:25 [exec] ... 52 more build 26-Mar-2019 15:24:25 [exec] Caused by: java.lang.IllegalStateException: Workbench has not been created yet. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ui.PlatformUI.getWorkbench(PlatformUI.java:93) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start(ExternalToolsPlugin.java:254) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:779) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:1) build 26-Mar-2019 15:24:25 [exec] at java.security.AccessController.doPrivileged(Native Method) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:772) build 26-Mar-2019 15:24:25 [exec] ... 59 more build 26-Mar-2019 15:24:25 [exec] !SUBENTRY 1 org.eclipse.equinox.registry 4 1 2019-03-26 15:24:22.344 build 26-Mar-2019 15:24:25 [exec] !MESSAGE Plug-in org.eclipse.ui.externaltools was unable to load class org.eclipse.ui.externaltools.internal.variables.BuildProjectResolver. build 26-Mar-2019 15:24:25 [exec] !STACK 0 build 26-Mar-2019 15:24:25 [exec] java.lang.ClassNotFoundException: An error occurred while automatically activating bundle org.eclipse.ui.externaltools (786). build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:123) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.classpath.ClasspathManager.findLocalClass(ClasspathManager.java:505) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.findLocalClass(ModuleClassLoader.java:328) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findLocalClass(BundleLoader.java:392) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:470) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:419) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:411) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:150) build 26-Mar-2019 15:24:25 [exec] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.loadClass(EquinoxBundle.java:609) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:177) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ExtensionRegistry.createExecutableExtension(ExtensionRegistry.java:931) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ConfigurationElement.createExecutableExtension(ConfigurationElement.java:243) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ConfigurationElementHandle.createExecutableExtension(ConfigurationElementHandle.java:60) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.DynamicVariable.getValue(DynamicVariable.java:48) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.resolve(StringSubstitutionEngine.java:269) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.substitute(StringSubstitutionEngine.java:192) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.performStringSubstitution(StringSubstitutionEngine.java:87) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:358) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.launchConfigurations.ExternalToolsCoreUtil.getLocation(ExternalToolsCoreUtil.java:73) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ant.internal.launching.launchConfigurations.AntLaunchDelegate.launch(AntLaunchDelegate.java:161) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:859) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:717) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:712) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.launchBuild(ExternalToolBuilder.java:183) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.doBuildBasedOnScope(ExternalToolBuilder.java:171) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.build(ExternalToolBuilder.java:90) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 26-Mar-2019 15:24:25 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 26-Mar-2019 15:24:25 [exec] Caused by: org.osgi.framework.BundleException: Exception in org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start() of bundle org.eclipse.ui.externaltools. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:800) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.start(BundleContextImpl.java:729) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.startWorker0(EquinoxBundle.java:1002) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle$EquinoxModule.startWorker(EquinoxBundle.java:354) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.container.Module.doStart(Module.java:581) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.container.Module.start(Module.java:449) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.framework.util.SecureAction.start(SecureAction.java:468) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:114) build 26-Mar-2019 15:24:25 [exec] ... 52 more build 26-Mar-2019 15:24:25 [exec] Caused by: java.lang.IllegalStateException: Workbench has not been created yet. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ui.PlatformUI.getWorkbench(PlatformUI.java:93) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start(ExternalToolsPlugin.java:254) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:779) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:1) build 26-Mar-2019 15:24:25 [exec] at java.security.AccessController.doPrivileged(Native Method) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:772) build 26-Mar-2019 15:24:25 [exec] ... 59 more build 26-Mar-2019 15:24:25 [exec] !SUBENTRY 1 org.eclipse.equinox.registry 4 1 2019-03-26 15:24:22.344 build 26-Mar-2019 15:24:25 [exec] !MESSAGE Plug-in org.eclipse.ui.externaltools was unable to load class org.eclipse.ui.externaltools.internal.variables.BuildProjectResolver. build 26-Mar-2019 15:24:25 [exec] !STACK 0 build 26-Mar-2019 15:24:25 [exec] java.lang.ClassNotFoundException: An error occurred while automatically activating bundle org.eclipse.ui.externaltools (786). build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:123) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.classpath.ClasspathManager.findLocalClass(ClasspathManager.java:505) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.findLocalClass(ModuleClassLoader.java:328) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findLocalClass(BundleLoader.java:392) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:470) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:419) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:411) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:150) build 26-Mar-2019 15:24:25 [exec] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.loadClass(EquinoxBundle.java:609) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:177) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ExtensionRegistry.createExecutableExtension(ExtensionRegistry.java:931) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ConfigurationElement.createExecutableExtension(ConfigurationElement.java:243) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ConfigurationElementHandle.createExecutableExtension(ConfigurationElementHandle.java:60) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.DynamicVariable.getValue(DynamicVariable.java:48) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.resolve(StringSubstitutionEngine.java:269) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.substitute(StringSubstitutionEngine.java:192) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.performStringSubstitution(StringSubstitutionEngine.java:87) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:358) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.launchConfigurations.ExternalToolsCoreUtil.getLocation(ExternalToolsCoreUtil.java:73) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ant.internal.launching.launchConfigurations.AntLaunchDelegate.launch(AntLaunchDelegate.java:161) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:859) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:717) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:712) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.launchBuild(ExternalToolBuilder.java:183) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.doBuildBasedOnScope(ExternalToolBuilder.java:171) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.build(ExternalToolBuilder.java:90) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 26-Mar-2019 15:24:25 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 26-Mar-2019 15:24:25 [exec] Caused by: org.osgi.framework.BundleException: Exception in org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start() of bundle org.eclipse.ui.externaltools. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:800) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.start(BundleContextImpl.java:729) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.startWorker0(EquinoxBundle.java:1002) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle$EquinoxModule.startWorker(EquinoxBundle.java:354) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.container.Module.doStart(Module.java:581) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.container.Module.start(Module.java:449) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.framework.util.SecureAction.start(SecureAction.java:468) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:114) build 26-Mar-2019 15:24:25 [exec] ... 52 more build 26-Mar-2019 15:24:25 [exec] Caused by: java.lang.IllegalStateException: Workbench has not been created yet. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ui.PlatformUI.getWorkbench(PlatformUI.java:93) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start(ExternalToolsPlugin.java:254) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:779) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:1) build 26-Mar-2019 15:24:25 [exec] at java.security.AccessController.doPrivileged(Native Method) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:772) build 26-Mar-2019 15:24:25 [exec] ... 59 more build 26-Mar-2019 15:24:25 [exec] build 26-Mar-2019 15:24:25 [exec] !ENTRY org.eclipse.osgi 4 0 2019-03-26 15:24:22.361 build 26-Mar-2019 15:24:25 [exec] !MESSAGE Application error build 26-Mar-2019 15:24:25 [exec] !STACK 1 build 26-Mar-2019 15:24:25 [exec] org.eclipse.core.internal.resources.ResourceException: Errors occurred during the build. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:517) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 26-Mar-2019 15:24:25 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 26-Mar-2019 15:24:25 [exec] Contains: Errors running builder 'Integrated External Tool Builder' on project 'jalview-js'. build 26-Mar-2019 15:24:25 [exec] org.eclipse.core.runtime.CoreException: Plug-in org.eclipse.ui.externaltools was unable to load class org.eclipse.ui.externaltools.internal.variables.BuildProjectResolver. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.throwException(RegistryStrategyOSGI.java:197) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:179) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ExtensionRegistry.createExecutableExtension(ExtensionRegistry.java:931) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ConfigurationElement.createExecutableExtension(ConfigurationElement.java:243) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ConfigurationElementHandle.createExecutableExtension(ConfigurationElementHandle.java:60) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.DynamicVariable.getValue(DynamicVariable.java:48) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.resolve(StringSubstitutionEngine.java:269) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.substitute(StringSubstitutionEngine.java:192) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.performStringSubstitution(StringSubstitutionEngine.java:87) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:358) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.launchConfigurations.ExternalToolsCoreUtil.getLocation(ExternalToolsCoreUtil.java:73) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ant.internal.launching.launchConfigurations.AntLaunchDelegate.launch(AntLaunchDelegate.java:161) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:859) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:717) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:712) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.launchBuild(ExternalToolBuilder.java:183) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.doBuildBasedOnScope(ExternalToolBuilder.java:171) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.build(ExternalToolBuilder.java:90) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 26-Mar-2019 15:24:25 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 26-Mar-2019 15:24:25 [exec] Caused by: java.lang.ClassNotFoundException: An error occurred while automatically activating bundle org.eclipse.ui.externaltools (786). build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:123) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.classpath.ClasspathManager.findLocalClass(ClasspathManager.java:505) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.findLocalClass(ModuleClassLoader.java:328) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findLocalClass(BundleLoader.java:392) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:470) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:419) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:411) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:150) build 26-Mar-2019 15:24:25 [exec] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.loadClass(EquinoxBundle.java:609) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:177) build 26-Mar-2019 15:24:25 [exec] ... 42 more build 26-Mar-2019 15:24:25 [exec] Caused by: org.osgi.framework.BundleException: Exception in org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start() of bundle org.eclipse.ui.externaltools. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:800) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.start(BundleContextImpl.java:729) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.startWorker0(EquinoxBundle.java:1002) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle$EquinoxModule.startWorker(EquinoxBundle.java:354) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.container.Module.doStart(Module.java:581) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.container.Module.start(Module.java:449) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.framework.util.SecureAction.start(SecureAction.java:468) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:114) build 26-Mar-2019 15:24:25 [exec] ... 52 more build 26-Mar-2019 15:24:25 [exec] Caused by: java.lang.IllegalStateException: Workbench has not been created yet. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ui.PlatformUI.getWorkbench(PlatformUI.java:93) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start(ExternalToolsPlugin.java:254) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:779) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:1) build 26-Mar-2019 15:24:25 [exec] at java.security.AccessController.doPrivileged(Native Method) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:772) build 26-Mar-2019 15:24:25 [exec] ... 59 more build 26-Mar-2019 15:24:25 [exec] Contains: Plug-in org.eclipse.ui.externaltools was unable to load class org.eclipse.ui.externaltools.internal.variables.BuildProjectResolver. build 26-Mar-2019 15:24:25 [exec] java.lang.ClassNotFoundException: An error occurred while automatically activating bundle org.eclipse.ui.externaltools (786). build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:123) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.classpath.ClasspathManager.findLocalClass(ClasspathManager.java:505) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.findLocalClass(ModuleClassLoader.java:328) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findLocalClass(BundleLoader.java:392) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:470) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:419) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:411) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:150) build 26-Mar-2019 15:24:25 [exec] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.loadClass(EquinoxBundle.java:609) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:177) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ExtensionRegistry.createExecutableExtension(ExtensionRegistry.java:931) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ConfigurationElement.createExecutableExtension(ConfigurationElement.java:243) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.registry.ConfigurationElementHandle.createExecutableExtension(ConfigurationElementHandle.java:60) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.DynamicVariable.getValue(DynamicVariable.java:48) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.resolve(StringSubstitutionEngine.java:269) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.substitute(StringSubstitutionEngine.java:192) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.performStringSubstitution(StringSubstitutionEngine.java:87) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:358) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.launchConfigurations.ExternalToolsCoreUtil.getLocation(ExternalToolsCoreUtil.java:73) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ant.internal.launching.launchConfigurations.AntLaunchDelegate.launch(AntLaunchDelegate.java:161) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:859) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:717) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:712) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.launchBuild(ExternalToolBuilder.java:183) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.doBuildBasedOnScope(ExternalToolBuilder.java:171) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.build(ExternalToolBuilder.java:90) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 26-Mar-2019 15:24:25 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 26-Mar-2019 15:24:25 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 26-Mar-2019 15:24:25 [exec] Caused by: org.osgi.framework.BundleException: Exception in org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start() of bundle org.eclipse.ui.externaltools. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:800) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.start(BundleContextImpl.java:729) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.startWorker0(EquinoxBundle.java:1002) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle$EquinoxModule.startWorker(EquinoxBundle.java:354) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.container.Module.doStart(Module.java:581) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.container.Module.start(Module.java:449) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.framework.util.SecureAction.start(SecureAction.java:468) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:114) build 26-Mar-2019 15:24:25 [exec] ... 52 more build 26-Mar-2019 15:24:25 [exec] Caused by: java.lang.IllegalStateException: Workbench has not been created yet. build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ui.PlatformUI.getWorkbench(PlatformUI.java:93) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start(ExternalToolsPlugin.java:254) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:779) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:1) build 26-Mar-2019 15:24:25 [exec] at java.security.AccessController.doPrivileged(Native Method) build 26-Mar-2019 15:24:25 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:772) build 26-Mar-2019 15:24:25 [exec] ... 59 more build 26-Mar-2019 15:24:25 [exec] build 26-Mar-2019 15:24:25 [exec] !ENTRY org.eclipse.core.resources 2 10035 2019-03-26 15:24:23.846 build 26-Mar-2019 15:24:25 [exec] !MESSAGE The workspace will exit with unsaved changes in this session. build 26-Mar-2019 15:24:26 [copy] Copying 346 files to /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site build 26-Mar-2019 15:24:26 [copy] Copied 116 empty directories to 87 empty directories under /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site build 26-Mar-2019 15:24:26 build 26-Mar-2019 15:24:26 unzip-to-site: build 26-Mar-2019 15:24:26 [unzip] Expanding: /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/libjs/MiGLayout-site.zip into /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site build 26-Mar-2019 15:24:26 [unzip] Expanding: /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/libjs/VARNA-site.zip into /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site build 26-Mar-2019 15:24:26 [unzip] Expanding: /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/libjs/jmol-app.zip into /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site build 26-Mar-2019 15:24:27 [unzip] Expanding: /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/libjs/json-site.zip into /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site build 26-Mar-2019 15:24:27 [copy] Copying 29 files to /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site/swingjs/j2s build 26-Mar-2019 15:24:27 [copy] Copying 44 files to /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site/examples build 26-Mar-2019 15:24:27 [unzip] Expanding: /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/swingjs/SwingJS-site.zip into /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site build 26-Mar-2019 15:24:27 build 26-Mar-2019 15:24:27 build-site: build 26-Mar-2019 15:24:27 [tar] Building tar: /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site.tar.gz build 26-Mar-2019 15:24:29 build 26-Mar-2019 15:24:29 BUILD SUCCESSFUL build 26-Mar-2019 15:24:29 Total time: 1 minute 20 seconds simple 26-Mar-2019 15:24:29 Finished task 'run jalviewjs build' with result: Success simple 26-Mar-2019 15:24:29 Running post build plugin 'NCover Results Collector' simple 26-Mar-2019 15:24:29 Running post build plugin 'Artifact Copier' simple 26-Mar-2019 15:24:29 Publishing an artifact: jalviewjs-site.tar.gz simple 26-Mar-2019 15:24:29 Finished publishing of artifact Shared artifact: [jalviewjs-site.tar.gz], pattern: [site.tar.gz] anchored at: [./] in 58.13 ms simple 26-Mar-2019 15:24:29 Publishing an artifact: jalviewjs simple 26-Mar-2019 15:24:31 Finished publishing of artifact Shared artifact: [jalviewjs], pattern: [**/*] anchored at: [site/] in 1.480 s simple 26-Mar-2019 15:24:31 Running post build plugin 'Artifactory Release Management Staging' simple 26-Mar-2019 15:24:31 Running post build plugin 'Artifactory Build Info Copier' simple 26-Mar-2019 15:24:31 Running post build plugin 'Artifactory Gradle Properties Info Copier' simple 26-Mar-2019 15:24:31 Running post build plugin 'npm Cache Cleanup' simple 26-Mar-2019 15:24:31 Running post build plugin 'Clover Results Collector' simple 26-Mar-2019 15:24:31 Running post build plugin 'Docker Container Cleanup' simple 26-Mar-2019 15:24:31 Successfully removed working directory at '/srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1' simple 26-Mar-2019 15:24:31 Finalising the build... simple 26-Mar-2019 15:24:31 Stopping timer. simple 26-Mar-2019 15:24:31 Build JB-JB0-JOB1-3 completed. simple 26-Mar-2019 15:24:31 Running on server: post build plugin 'NCover Results Collector' simple 26-Mar-2019 15:24:31 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 26-Mar-2019 15:24:31 Running on server: post build plugin 'Clover Delta Calculator' simple 26-Mar-2019 15:24:31 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 26-Mar-2019 15:24:31 All post build plugins have finished simple 26-Mar-2019 15:24:31 Generating build results summary... simple 26-Mar-2019 15:24:31 Saving build results to disk... simple 26-Mar-2019 15:24:31 Logging substituted variables... simple 26-Mar-2019 15:24:31 Indexing build results... simple 26-Mar-2019 15:24:31 Finished building JB-JB0-JOB1-3.