simple 14-Mar-2019 06:03:43 Build Jalview Builds - jalviewjs - Jalview-JS-demo - Default Job #2 (JB-JB0-JOB1-2) started building on agent Default Agent simple 14-Mar-2019 06:03:43 simple 14-Mar-2019 06:03:43 Build working directory is /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1 simple 14-Mar-2019 06:03:43 Executing build Jalview Builds - jalviewjs - Jalview-JS-demo - Default Job #2 (JB-JB0-JOB1-2) simple 14-Mar-2019 06:03:43 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' simple 14-Mar-2019 06:03:43 Checking out into /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1 simple 14-Mar-2019 06:03:43 Updating source code to revision: 7a854962da5b44af995fa9dd6f4fb708d2b2036a simple 14-Mar-2019 06:03:43 Fetching 'refs/heads/Jalview-JS/demo' from 'http://source.jalview.org/git/jalview.git'. simple 14-Mar-2019 06:03:44 Checking out revision 7a854962da5b44af995fa9dd6f4fb708d2b2036a. simple 14-Mar-2019 06:03:45 Already on 'Jalview-JS/demo' simple 14-Mar-2019 06:03:45 Updated source code to revision: 7a854962da5b44af995fa9dd6f4fb708d2b2036a simple 14-Mar-2019 06:03:45 Finished task 'Checkout Default Repository' with result: Success simple 14-Mar-2019 06:03:45 Running pre-build action: VCS Version Collector simple 14-Mar-2019 06:03:45 Running pre-build action: Artifactory Release Staging simple 14-Mar-2019 06:03:45 Starting task 'run jalviewjs build' of type 'com.atlassian.bamboo.plugins.ant:task.builder.ant' command 14-Mar-2019 06:03:45 Beginning to execute external process for build 'Jalview Builds - jalviewjs - Jalview-JS-demo - Default Job #2 (JB-JB0-JOB1-2)'\n ... running command line: \n/home/bamboo/buildtools/x11-ant/bin/ant -Djava.io.tmpdir=/home/bamboo/latest/temp/JB-JB0-JOB1 -f build.xml build-site\n ... in: /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1\n ... using extra environment variables: 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Job\nbamboo_buildResultsUrl=https://builds.jalview.org/browse/JB-JB0-JOB1-2\nbamboo_planRepository_repositoryUrl=http://source.jalview.org/git/jalview.git\nbamboo_agentId=196609\nbamboo_planName=Jalview Builds - jalviewjs - Jalview-JS-demo\nbamboo_shortPlanKey=JB0\nbamboo_repository_6258783_branch_name=Jalview-JS/demo\nbamboo_shortJobKey=JOB1\nbamboo_capability_system_jdk_OpenJDK_11=/home/bamboo/buildtools/jvm/jdk11_x64_linux\nbamboo_planRepository_revision=7a854962da5b44af995fa9dd6f4fb708d2b2036a\nbamboo_buildTimeStamp=2019-03-14T06:03:43.837Z\nbamboo_repository_previous_revision_number=7a854962da5b44af995fa9dd6f4fb708d2b2036a\nbamboo_planRepository_previousRevision=7a854962da5b44af995fa9dd6f4fb708d2b2036a\nbamboo_repository_git_branch=Jalview-JS/demo\nbamboo_buildResultKey=JB-JB0-JOB1-2\nbamboo_repository_branch_name=Jalview-JS/demo\nbamboo_buildPlanName=Jalview Builds - jalviewjs - Jalview-JS-demo - Default Job\nbamboo_capability_system_builder_ant_j11_Ant=/home/bamboo/buildtools/j11/ant-j11\nbamboo_planRepository_1_revision=7a854962da5b44af995fa9dd6f4fb708d2b2036a\nbamboo_capability_system_builder_ant_x11_Ant=/home/bamboo/buildtools/x11-ant\nbamboo_repository_name=Jalview Git\nJAVA_HOME=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.171-8.b10.el7_5.x86_64\nbamboo_dependenciesDisabled=false\nbamboo_buildFailed=false\nANT_HOME=/home/bamboo/buildtools/x11-ant\nbamboo_planRepository_branch=Jalview-JS/demo\nbamboo_agentWorkingDirectory=/srv/bamboo/bamboo-home/xml-data/build-dir\nbamboo_capability_system_git_executable=/bin/git\nbamboo_repository_git_username=\nbamboo_planRepository_1_previousRevision=7a854962da5b44af995fa9dd6f4fb708d2b2036a\nbamboo_planRepository_branchDisplayName=Jalview-JS/demo\nbamboo_planRepository_1_type=gitv2\nbamboo_planRepository_branchName=Jalview-JS/demo\nbamboo_repository_6258783_git_username=\nbamboo_capability_system_builder_ant_j11_x11_Ant=/home/bamboo/buildtools/j11/x11-ant-j11\nbamboo_capability_system_builderivy_Ivy=/usr\nbamboo_capability_system_jdk_JDK=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.171-8.b10.el7_5.x86_64\nbamboo_plan_storageTag=plan-6062269\nbamboo_capability_system_builder_gradle_Gradle=/home/bamboo/buildtools/gradle\nbamboo_hg_cache_directory=/srv/bamboo/bamboo-home/xml-data/build-dir/_hg-repositories-cache\nbamboo_repository_6258783_git_repositoryUrl=http://source.jalview.org/git/jalview.git\nbamboo_planRepository_1_username=\nbamboo_planRepository_type=gitv2\nbamboo_git_cache_directory=/srv/bamboo/bamboo-home/xml-data/build-dir/_git-repositories-cache\nbamboo_ManualBuildTriggerReason_userName=jprocter\nbamboo_repository_git_repositoryUrl=http://source.jalview.org/git/jalview.git\nbamboo_capability_system_builder_ant_Ant=/usr\nbamboo_capability_system_builder_mvn3_Maven_3=/usr/share/maven\nbamboo_tmp_directory=/srv/bamboo/bamboo-home/temp\nbamboo_working_directory=/srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1\nbamboo_planKey=JB-JB0\nbamboo_planRepository_1_repositoryUrl=http://source.jalview.org/git/jalview.git\nbamboo_planRepository_username=\nbamboo_repository_6258783_previous_revision_number=7a854962da5b44af995fa9dd6f4fb708d2b2036a\nbamboo_capability_system_jdk_JDK_1_8=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.171-8.b10.el7_5.x86_64\nbamboo_repository_6258783_revision_number=7a854962da5b44af995fa9dd6f4fb708d2b2036a\nbamboo_repository_6258783_name=Jalview Git\nbamboo_repository_6258783_git_branch=Jalview-JS/demo\nbamboo_planRepository_1_branchName=Jalview-JS/demo\nPATH=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.171-8.b10.el7_5.x86_64/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin\n build 14-Mar-2019 06:03:49 Buildfile: /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/build.xml build 14-Mar-2019 06:03:50 build 14-Mar-2019 06:03:50 init: build 14-Mar-2019 06:03:50 build 14-Mar-2019 06:03:50 prepare: build 14-Mar-2019 06:03:50 [mkdir] Created dir: /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/classes build 14-Mar-2019 06:03:50 [copy] Copying 286 files to /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/classes build 14-Mar-2019 06:03:50 build 14-Mar-2019 06:03:50 prepare-site: build 14-Mar-2019 06:03:50 build 14-Mar-2019 06:03:50 clean-site: build 14-Mar-2019 06:03:50 [delete] Deleting directory /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/site build 14-Mar-2019 06:03:50 [mkdir] Created dir: /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/site build 14-Mar-2019 06:03:50 build 14-Mar-2019 06:03:50 compile-site: build 14-Mar-2019 06:03:50 [copy] Copying 1 file to /home/bamboo/buildtools/eclipse/eclipse-js/dropins build 14-Mar-2019 06:03:55 [exec] HEAD is now at 2d8dfad JAL-3208 re-enable the setprop CLI arg, but only in JalviewJS build 14-Mar-2019 06:04:04 [exec] From http://source.jalview.org/git/jalview build 14-Mar-2019 06:04:04 [exec] fbf1b22..7a85496 Jalview-JS/demo -> origin/Jalview-JS/demo build 14-Mar-2019 06:04:04 [exec] * [new branch] bug/JAL-3075 -> origin/bug/JAL-3075 build 14-Mar-2019 06:04:04 [exec] 928017f..46242d0 bug/JAL-3201groupClustal -> origin/bug/JAL-3201groupClustal build 14-Mar-2019 06:04:04 [exec] 6b1f3fb..549cdd8 develop -> origin/develop build 14-Mar-2019 06:04:04 [exec] * [new branch] feature/JAL-2250colourAllGroups -> origin/feature/JAL-2250colourAllGroups build 14-Mar-2019 06:04:04 [exec] 231667f..c5b363c feature/JAL-3127_seqidChainshading -> origin/feature/JAL-3127_seqidChainshading build 14-Mar-2019 06:04:04 [exec] 73f6ca4..74237ef features/JAL-722alignmentProperties -> origin/features/JAL-722alignmentProperties build 14-Mar-2019 06:04:04 [exec] 51fbf09..4f6d92b task/JAL-3130_Java_11_investigations-Ben-2 -> origin/task/JAL-3130_Java_11_investigations-Ben-2 build 14-Mar-2019 06:04:04 [exec] af3b248..721cc0f task/JAL-3196_Gradle_build_with_install4j_launchers -> origin/task/JAL-3196_Gradle_build_with_install4j_launchers build 14-Mar-2019 06:04:04 [exec] 1cb8662..e3aa01e tasks/JAL-3035_remove_dasobert_dependency -> origin/tasks/JAL-3035_remove_dasobert_dependency build 14-Mar-2019 06:04:04 [exec] You are not currently on a branch. Please specify which build 14-Mar-2019 06:04:04 [exec] branch you want to merge with. See git-pull(1) for details. build 14-Mar-2019 06:04:04 [exec] build 14-Mar-2019 06:04:04 [exec] git pull build 14-Mar-2019 06:04:04 [exec] build 14-Mar-2019 06:04:04 [exec] Result: 1 build 14-Mar-2019 06:04:05 [exec] Previous HEAD position was 2d8dfad... JAL-3208 re-enable the setprop CLI arg, but only in JalviewJS build 14-Mar-2019 06:04:05 [exec] HEAD is now at 7a85496... null change in hope of triggering a build build 14-Mar-2019 06:04:05 [copy] Copying 1 file to /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js build 14-Mar-2019 06:04:05 [delete] Deleting: /home/bamboo/buildtools/eclipse/eclipse-js-workspace/.metadata/.log build 14-Mar-2019 06:04:30 [exec] org.eclipse.m2e.logback.configuration: The org.eclipse.m2e.logback.configuration bundle was activated before the state location was initialized. Will retry after the state location is initialized. build 14-Mar-2019 06:04:37 [exec] SLF4J: Class path contains multiple SLF4J bindings. build 14-Mar-2019 06:04:37 [exec] SLF4J: Found binding in [bundleresource://981.fwk1445157774:1/org/slf4j/impl/StaticLoggerBinder.class] build 14-Mar-2019 06:04:37 [exec] SLF4J: Found binding in [bundleresource://981.fwk1445157774:2/org/slf4j/impl/StaticLoggerBinder.class] build 14-Mar-2019 06:04:37 [exec] SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an explanation. build 14-Mar-2019 06:04:37 [exec] SLF4J: Actual binding is of type [ch.qos.logback.classic.util.ContextSelectorStaticBinder] build 14-Mar-2019 06:04:37 [exec] org.eclipse.m2e.logback.configuration: Logback config file: /home/bamboo/buildtools/eclipse/eclipse-js-workspace/.metadata/.plugins/org.eclipse.m2e.logback.configuration/logback.1.9.0.20180606-2036.xml build 14-Mar-2019 06:04:37 [exec] org.eclipse.m2e.logback.configuration: Initializing logback build 14-Mar-2019 06:04:39 [exec] Building workspace build 14-Mar-2019 06:04:39 [exec] Building '/RemoteSystemsTempFiles' build 14-Mar-2019 06:04:39 [exec] Building '/jalview-js' build 14-Mar-2019 06:04:39 [exec] Invoking 'Java Builder' on '/jalview-js'. build 14-Mar-2019 06:04:45 [exec] net.sf.j2s.core.3.2.4/3.2.4.06 started build 14-Mar-2019 06:04:45 [exec] CompilationParticipant started build 14-Mar-2019 06:04:45 [exec] isActive true /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js build 14-Mar-2019 06:04:45 [exec] aboutToBuild /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js build 14-Mar-2019 06:04:45 [exec] cleanStarting /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js build 14-Mar-2019 06:04:45 [exec] Cleaning output folder for jalview-js build 14-Mar-2019 06:04:45 [exec] Build done build 14-Mar-2019 06:04:45 [exec] Invoking 'Faceted Project Validation Builder' on '/jalview-js'. build 14-Mar-2019 06:04:45 [exec] Building workspace build 14-Mar-2019 06:04:45 [exec] Building '/.org.eclipse.jdt.core.external.folders' build 14-Mar-2019 06:04:45 [exec] Building '/RemoteSystemsTempFiles' build 14-Mar-2019 06:04:45 [exec] Building '/jalview-js' build 14-Mar-2019 06:04:45 [exec] Invoking 'Java Builder' on '/jalview-js'. build 14-Mar-2019 06:04:45 [exec] isActive true /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js build 14-Mar-2019 06:04:45 [exec] aboutToBuild /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js build 14-Mar-2019 06:04:45 [exec] Preparing to build jalview-js build 14-Mar-2019 06:04:46 [exec] Cleaning output folder for jalview-js build 14-Mar-2019 06:04:46 [exec] cleanStarting /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js build 14-Mar-2019 06:04:46 [exec] Copying resources to the output folder build 14-Mar-2019 06:04:46 [exec] Analyzing sources build 14-Mar-2019 06:04:46 [exec] buildStarting 1122 files, isBatch=true build 14-Mar-2019 06:04:46 [exec] Compiling jalview-js/src/com/github/reinert/jjschema build 14-Mar-2019 06:04:48 [exec] Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 1 warning) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 2 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 3 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 4 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 5 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 9 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 12 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 13 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 14 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 15 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 37 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 38 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 46 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 47 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 48 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 49 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 50 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 51 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 52 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 59 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 63 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 67 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 69 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 89 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 90 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:48 [exec] (Found 91 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:49 [exec] (Found 98 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:49 [exec] (Found 108 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:49 [exec] (Found 113 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:49 [exec] (Found 114 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:49 [exec] (Found 115 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:49 [exec] (Found 119 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:49 [exec] (Found 120 warnings) Compiling jalview-js/src/com/stevesoft/pat build 14-Mar-2019 06:04:49 [exec] (Found 120 warnings) Compiling jalview-js/src/com/stevesoft/pat/wrap build 14-Mar-2019 06:04:49 [exec] (Found 120 warnings) Compiling jalview-js/src/ext/edu/ucsf/rbvi/strucviz2 build 14-Mar-2019 06:04:49 [exec] (Found 122 warnings) Compiling jalview-js/src/ext/edu/ucsf/rbvi/strucviz2 build 14-Mar-2019 06:04:49 [exec] (Found 129 warnings) Compiling jalview-js/src/ext/edu/ucsf/rbvi/strucviz2 build 14-Mar-2019 06:04:49 [exec] (Found 138 warnings) Compiling jalview-js/src/ext/edu/ucsf/rbvi/strucviz2/port build 14-Mar-2019 06:04:49 [exec] (Found 138 warnings) Compiling jalview-js/src/ext/vamsas build 14-Mar-2019 06:04:49 [exec] (Found 145 warnings) Compiling jalview-js/src/ext/vamsas build 14-Mar-2019 06:04:49 [exec] (Found 152 warnings) Compiling jalview-js/src/ext/vamsas build 14-Mar-2019 06:04:49 [exec] (Found 190 warnings) Compiling jalview-js/src/ext/vamsas build 14-Mar-2019 06:04:49 [exec] (Found 197 warnings) Compiling jalview-js/src/ext/vamsas build 14-Mar-2019 06:04:49 [exec] (Found 253 warnings) Compiling jalview-js/src/ext/vamsas build 14-Mar-2019 06:04:49 [exec] (Found 285 warnings) Compiling jalview-js/src/ext/vamsas build 14-Mar-2019 06:04:49 [exec] (Found 292 warnings) Compiling jalview-js/src/ext/vamsas build 14-Mar-2019 06:04:49 [exec] (Found 360 warnings) Compiling jalview-js/src/ext/vamsas build 14-Mar-2019 06:04:49 [exec] (Found 363 warnings) Compiling jalview-js/src/ext/vamsas build 14-Mar-2019 06:04:49 [exec] (Found 366 warnings) Compiling jalview-js/src/ext/vamsas build 14-Mar-2019 06:04:49 [exec] (Found 370 warnings) Compiling jalview-js/src/jalview/analysis build 14-Mar-2019 06:04:49 [exec] (Found 380 warnings) Compiling jalview-js/src/jalview/analysis build 14-Mar-2019 06:04:49 [exec] (Found 381 warnings) Compiling jalview-js/src/jalview/analysis build 14-Mar-2019 06:04:49 [exec] (Found 382 warnings) Compiling jalview-js/src/jalview/analysis build 14-Mar-2019 06:04:49 [exec] (Found 383 warnings) Compiling jalview-js/src/jalview/analysis build 14-Mar-2019 06:04:49 [exec] (Found 384 warnings) Compiling jalview-js/src/jalview/analysis build 14-Mar-2019 06:04:49 [exec] (Found 410 warnings) Compiling jalview-js/src/jalview/analysis build 14-Mar-2019 06:04:49 [exec] (Found 414 warnings) Compiling jalview-js/src/jalview/analysis build 14-Mar-2019 06:04:49 [exec] (Found 433 warnings) Compiling jalview-js/src/jalview/analysis build 14-Mar-2019 06:04:49 [exec] (Found 434 warnings) Compiling jalview-js/src/jalview/analysis build 14-Mar-2019 06:04:49 [exec] (Found 434 warnings) Compiling jalview-js/src/jalview/analysis/scoremodels build 14-Mar-2019 06:04:49 [exec] (Found 434 warnings) Compiling jalview-js/src/jalview/api build 14-Mar-2019 06:04:49 [exec] (Found 438 warnings) Compiling jalview-js/src/jalview/api build 14-Mar-2019 06:04:49 [exec] (Found 438 warnings) Compiling jalview-js/src/jalview/api/analysis build 14-Mar-2019 06:04:49 [exec] (Found 438 warnings) Compiling jalview-js/src/jalview/api/structures build 14-Mar-2019 06:04:49 [exec] (Found 439 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:49 [exec] (Found 463 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:49 [exec] (Found 466 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:49 [exec] (Found 468 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:49 [exec] (Found 469 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:49 [exec] (Found 485 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:49 [exec] (Found 486 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:49 [exec] (Found 488 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:49 [exec] (Found 491 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 492 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 493 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 494 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 498 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 500 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 501 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 502 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 503 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 505 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 506 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 507 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 508 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 512 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 513 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 520 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 530 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 533 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 534 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 535 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 538 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 539 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 540 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 541 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 549 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 550 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 551 warnings) Compiling jalview-js/src/jalview/appletgui build 14-Mar-2019 06:04:50 [exec] (Found 551 warnings) Compiling jalview-js/src/jalview/bin build 14-Mar-2019 06:04:50 [exec] (Found 557 warnings) Compiling jalview-js/src/jalview/bin build 14-Mar-2019 06:04:50 [exec] (Found 566 warnings) Compiling jalview-js/src/jalview/bin build 14-Mar-2019 06:04:50 [exec] (Found 575 warnings) Compiling jalview-js/src/jalview/bin build 14-Mar-2019 06:04:50 [exec] (Found 577 warnings) Compiling jalview-js/src/jalview/bin build 14-Mar-2019 06:04:50 [exec] (Found 602 warnings) Compiling jalview-js/src/jalview/bin build 14-Mar-2019 06:04:50 [exec] (Found 603 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 612 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 613 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 622 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 631 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 632 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 641 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 642 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 651 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 652 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 653 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 662 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 679 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 680 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 721 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 738 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 739 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 740 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 749 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 758 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 759 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 760 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 761 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 778 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 779 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 780 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 781 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 782 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 783 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 808 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 809 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 810 warnings) Compiling jalview-js/src/jalview/binding build 14-Mar-2019 06:04:50 [exec] (Found 819 warnings) Compiling jalview-js/src/jalview/binding/types build 14-Mar-2019 06:04:50 [exec] (Found 828 warnings) Compiling jalview-js/src/jalview/binding/types build 14-Mar-2019 06:04:50 [exec] (Found 837 warnings) Compiling jalview-js/src/jalview/binding/types build 14-Mar-2019 06:04:50 [exec] (Found 837 warnings) Compiling jalview-js/src/jalview/commands build 14-Mar-2019 06:04:50 [exec] (Found 837 warnings) Compiling jalview-js/src/jalview/controller build 14-Mar-2019 06:04:50 [exec] (Found 837 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 893 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 906 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 907 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 908 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 912 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 913 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 914 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 920 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 924 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 926 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 927 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 935 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 936 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 939 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 945 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 948 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 950 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 951 warnings) Compiling jalview-js/src/jalview/datamodel build 14-Mar-2019 06:04:50 [exec] (Found 951 warnings) Compiling jalview-js/src/jalview/datamodel/features build 14-Mar-2019 06:04:50 [exec] (Found 953 warnings) Compiling jalview-js/src/jalview/datamodel/features build 14-Mar-2019 06:04:50 [exec] (Found 953 warnings) Compiling jalview-js/src/jalview/exceptions build 14-Mar-2019 06:04:50 [exec] (Found 953 warnings) Compiling jalview-js/src/jalview/ext/android build 14-Mar-2019 06:04:50 [exec] (Found 953 warnings) Compiling jalview-js/src/jalview/ext/ensembl build 14-Mar-2019 06:04:50 [exec] (Found 954 warnings) Compiling jalview-js/src/jalview/ext/ensembl build 14-Mar-2019 06:04:51 [exec] (Found 956 warnings) Compiling jalview-js/src/jalview/ext/ensembl build 14-Mar-2019 06:04:51 [exec] (Found 958 warnings) Compiling jalview-js/src/jalview/ext/ensembl build 14-Mar-2019 06:04:51 [exec] (Found 959 warnings) Compiling jalview-js/src/jalview/ext/ensembl build 14-Mar-2019 06:04:51 [exec] (Found 961 warnings) Compiling jalview-js/src/jalview/ext/ensembl build 14-Mar-2019 06:04:51 [exec] (Found 964 warnings) Compiling jalview-js/src/jalview/ext/htsjdk build 14-Mar-2019 06:04:51 [exec] (Found 965 warnings) Compiling jalview-js/src/jalview/ext/htsjdk build 14-Mar-2019 06:04:51 [exec] (Found 967 warnings) Compiling jalview-js/src/jalview/ext/jmol build 14-Mar-2019 06:04:51 [exec] (Found 969 warnings) Compiling jalview-js/src/jalview/ext/jmol build 14-Mar-2019 06:04:51 [exec] (Found 970 warnings) Compiling jalview-js/src/jalview/ext/paradise build 14-Mar-2019 06:04:51 [exec] (Found 970 warnings) Compiling jalview-js/src/jalview/ext/rbvi/chimera build 14-Mar-2019 06:04:51 [exec] (Found 972 warnings) Compiling jalview-js/src/jalview/ext/rbvi/chimera build 14-Mar-2019 06:04:51 [exec] (Found 972 warnings) Compiling jalview-js/src/jalview/ext/so build 14-Mar-2019 06:04:51 [exec] (Found 972 warnings) Compiling jalview-js/src/jalview/ext/varna build 14-Mar-2019 06:04:51 [exec] (Found 972 warnings) Compiling jalview-js/src/jalview/fts/api build 14-Mar-2019 06:04:51 [exec] (Found 973 warnings) Compiling jalview-js/src/jalview/fts/api build 14-Mar-2019 06:04:51 [exec] (Found 974 warnings) Compiling jalview-js/src/jalview/fts/core build 14-Mar-2019 06:04:51 [exec] (Found 987 warnings) Compiling jalview-js/src/jalview/fts/core build 14-Mar-2019 06:04:51 [exec] (Found 990 warnings) Compiling jalview-js/src/jalview/fts/core build 14-Mar-2019 06:04:51 [exec] (Found 991 warnings) Compiling jalview-js/src/jalview/fts/core build 14-Mar-2019 06:04:51 [exec] (Found 1013 warnings) Compiling jalview-js/src/jalview/fts/service/pdb build 14-Mar-2019 06:04:51 [exec] (Found 1015 warnings) Compiling jalview-js/src/jalview/fts/service/uniprot build 14-Mar-2019 06:04:51 [exec] (Found 1037 warnings) Compiling jalview-js/src/jalview/fts/service/uniprot build 14-Mar-2019 06:04:51 [exec] (Found 1037 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1062 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1063 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1064 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1066 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1071 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1075 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1095 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1098 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1100 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1103 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1105 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1114 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1115 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1116 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1170 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1171 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1172 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1173 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1179 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1181 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:51 [exec] (Found 1183 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1197 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1202 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1203 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1207 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1208 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1209 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1210 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1211 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1218 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1247 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1264 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1266 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1269 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1270 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1271 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1280 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1281 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1282 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1283 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1290 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1307 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1309 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1311 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1312 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1318 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1327 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1342 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1345 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1347 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1348 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1349 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1350 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1354 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1359 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1369 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1427 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1435 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1445 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1463 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1464 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1465 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1493 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1523 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1531 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1590 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1622 warnings) Compiling jalview-js/src/jalview/gui build 14-Mar-2019 06:04:52 [exec] (Found 1622 warnings) Compiling jalview-js/src/jalview/httpserver build 14-Mar-2019 06:04:52 [exec] (Found 1622 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:52 [exec] (Found 1627 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:52 [exec] (Found 1629 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:52 [exec] (Found 1631 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:52 [exec] (Found 1633 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:52 [exec] (Found 1654 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:52 [exec] (Found 1655 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:52 [exec] (Found 1657 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:52 [exec] (Found 1658 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:52 [exec] (Found 1659 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:52 [exec] (Found 1660 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:52 [exec] (Found 1698 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:52 [exec] (Found 1700 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:52 [exec] (Found 1719 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:53 [exec] (Found 1722 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:53 [exec] (Found 1724 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:53 [exec] (Found 1725 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:53 [exec] (Found 1726 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:53 [exec] (Found 1739 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:53 [exec] (Found 1808 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:53 [exec] (Found 1809 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:53 [exec] (Found 1891 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:53 [exec] (Found 1896 warnings) Compiling jalview-js/src/jalview/io build 14-Mar-2019 06:04:53 [exec] (Found 1896 warnings) Compiling jalview-js/src/jalview/io/cache build 14-Mar-2019 06:04:53 [exec] (Found 1916 warnings) Compiling jalview-js/src/jalview/io/cache build 14-Mar-2019 06:04:53 [exec] (Found 1916 warnings) Compiling jalview-js/src/jalview/io/gff build 14-Mar-2019 06:04:53 [exec] (Found 1917 warnings) Compiling jalview-js/src/jalview/io/gff build 14-Mar-2019 06:04:53 [exec] (Found 1917 warnings) Compiling jalview-js/src/jalview/io/packed build 14-Mar-2019 06:04:53 [exec] (Found 1923 warnings) Compiling jalview-js/src/jalview/io/packed build 14-Mar-2019 06:04:53 [exec] (Found 1924 warnings) Compiling jalview-js/src/jalview/io/packed build 14-Mar-2019 06:04:53 [exec] (Found 1924 warnings) Compiling jalview-js/src/jalview/io/vamsas build 14-Mar-2019 06:04:53 [exec] (Found 1942 warnings) Compiling jalview-js/src/jalview/io/vamsas build 14-Mar-2019 06:04:53 [exec] (Found 1953 warnings) Compiling jalview-js/src/jalview/io/vamsas build 14-Mar-2019 06:04:53 [exec] (Found 1954 warnings) Compiling jalview-js/src/jalview/io/vamsas build 14-Mar-2019 06:04:53 [exec] (Found 1967 warnings) Compiling jalview-js/src/jalview/io/vamsas build 14-Mar-2019 06:04:53 [exec] (Found 1971 warnings) Compiling jalview-js/src/jalview/io/vamsas build 14-Mar-2019 06:04:53 [exec] (Found 1975 warnings) Compiling jalview-js/src/jalview/io/vamsas build 14-Mar-2019 06:04:53 [exec] (Found 1987 warnings) Compiling jalview-js/src/jalview/io/vamsas build 14-Mar-2019 06:04:53 [exec] (Found 1990 warnings) Compiling jalview-js/src/jalview/io/vcf build 14-Mar-2019 06:04:53 [exec] (Found 1997 warnings) Compiling jalview-js/src/jalview/javascript build 14-Mar-2019 06:04:53 [exec] (Found 1997 warnings) Compiling jalview-js/src/jalview/javascript/json build 14-Mar-2019 06:04:53 [exec] (Found 1997 warnings) Compiling jalview-js/src/jalview/javascript/log4j build 14-Mar-2019 06:04:53 [exec] (Found 1999 warnings) Compiling jalview-js/src/jalview/javascript/log4j build 14-Mar-2019 06:04:53 [exec] (Found 2001 warnings) Compiling jalview-js/src/jalview/javascript/log4j build 14-Mar-2019 06:04:53 [exec] (Found 2002 warnings) Compiling jalview-js/src/jalview/javascript/log4j/spi build 14-Mar-2019 06:04:53 [exec] (Found 2002 warnings) Compiling jalview-js/src/jalview/javascript/web build 14-Mar-2019 06:04:53 [exec] (Found 2003 warnings) Compiling jalview-js/src/jalview/javascript/web build 14-Mar-2019 06:04:53 [exec] (Found 2004 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2005 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2006 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2007 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2014 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2015 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2016 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2017 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2018 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2019 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2023 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2025 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2033 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2034 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2035 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2036 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2044 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2045 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2046 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2048 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2049 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2052 warnings) Compiling jalview-js/src/jalview/jbgui build 14-Mar-2019 06:04:53 [exec] (Found 2052 warnings) Compiling jalview-js/src/jalview/json/binding/biojs build 14-Mar-2019 06:04:53 [exec] (Found 2052 warnings) Compiling jalview-js/src/jalview/json/binding/biojson/v1 build 14-Mar-2019 06:04:53 [exec] (Found 2052 warnings) Compiling jalview-js/src/jalview/math build 14-Mar-2019 06:04:53 [exec] (Found 2080 warnings) Compiling jalview-js/src/jalview/project build 14-Mar-2019 06:04:53 [exec] (Found 2085 warnings) Compiling jalview-js/src/jalview/renderer build 14-Mar-2019 06:04:53 [exec] (Found 2085 warnings) Compiling jalview-js/src/jalview/renderer/seqfeatures build 14-Mar-2019 06:04:53 [exec] (Found 2085 warnings) Compiling jalview-js/src/jalview/rest build 14-Mar-2019 06:04:53 [exec] (Found 2086 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2087 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2104 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2121 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2122 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2123 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2124 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2125 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2134 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2143 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2144 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2153 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2162 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2163 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2180 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2181 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2182 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2183 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2184 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2193 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2226 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2227 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2268 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2285 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2286 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2287 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2304 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2305 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2306 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2307 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2308 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2309 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2318 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2327 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2336 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2337 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2346 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2347 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2356 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2389 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2390 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2391 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2400 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2401 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2402 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2403 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2404 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:53 [exec] (Found 2405 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:54 [exec] (Found 2422 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:54 [exec] (Found 2423 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:54 [exec] (Found 2440 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:54 [exec] (Found 2449 warnings) Compiling jalview-js/src/jalview/schemabinding/version2 build 14-Mar-2019 06:04:54 [exec] (Found 2450 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2451 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2452 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2453 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2455 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2456 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2457 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2458 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2459 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2460 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2461 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2462 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2463 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2464 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2465 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2467 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2468 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2469 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2470 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2471 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2472 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2473 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2474 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2475 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2476 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2477 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2478 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2479 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2480 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2482 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2484 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2485 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2486 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2487 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2488 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2489 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2490 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2491 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2492 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2493 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2494 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2495 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2496 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2497 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2498 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2499 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2501 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2502 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2503 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2505 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2506 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2507 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2516 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/types build 14-Mar-2019 06:04:54 [exec] (Found 2525 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/types build 14-Mar-2019 06:04:54 [exec] (Found 2534 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/types build 14-Mar-2019 06:04:54 [exec] (Found 2536 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/types/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2538 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/types/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2540 warnings) Compiling jalview-js/src/jalview/schemabinding/version2/types/descriptors build 14-Mar-2019 06:04:54 [exec] (Found 2540 warnings) Compiling jalview-js/src/jalview/schemes build 14-Mar-2019 06:04:54 [exec] (Found 2540 warnings) Compiling jalview-js/src/jalview/structure build 14-Mar-2019 06:04:54 [exec] (Found 2543 warnings) Compiling jalview-js/src/jalview/structure build 14-Mar-2019 06:04:54 [exec] (Found 2543 warnings) Compiling jalview-js/src/jalview/structures/models build 14-Mar-2019 06:04:54 [exec] (Found 2543 warnings) Compiling jalview-js/src/jalview/urls build 14-Mar-2019 06:04:54 [exec] (Found 2546 warnings) Compiling jalview-js/src/jalview/urls build 14-Mar-2019 06:04:54 [exec] (Found 2546 warnings) Compiling jalview-js/src/jalview/urls/api build 14-Mar-2019 06:04:54 [exec] (Found 2546 warnings) Compiling jalview-js/src/jalview/urls/applet build 14-Mar-2019 06:04:54 [exec] (Found 2546 warnings) Compiling jalview-js/src/jalview/urls/desktop build 14-Mar-2019 06:04:54 [exec] (Found 2546 warnings) Compiling jalview-js/src/jalview/util build 14-Mar-2019 06:04:54 [exec] (Found 2569 warnings) Compiling jalview-js/src/jalview/util build 14-Mar-2019 06:04:54 [exec] (Found 2570 warnings) Compiling jalview-js/src/jalview/util build 14-Mar-2019 06:04:54 [exec] (Found 2582 warnings) Compiling jalview-js/src/jalview/util build 14-Mar-2019 06:04:54 [exec] (Found 2586 warnings) Compiling jalview-js/src/jalview/util build 14-Mar-2019 06:04:54 [exec] (Found 2626 warnings) Compiling jalview-js/src/jalview/util build 14-Mar-2019 06:04:54 [exec] (Found 2627 warnings) Compiling jalview-js/src/jalview/util build 14-Mar-2019 06:04:54 [exec] (Found 2627 warnings) Compiling jalview-js/src/jalview/util/dialogrunner build 14-Mar-2019 06:04:54 [exec] (Found 2627 warnings) Compiling jalview-js/src/jalview/util build 14-Mar-2019 06:04:54 [exec] (Found 2627 warnings) Compiling jalview-js/src/jalview/util/matcher build 14-Mar-2019 06:04:54 [exec] (Found 2629 warnings) Compiling jalview-js/src/jalview/util/matcher build 14-Mar-2019 06:04:54 [exec] (Found 2637 warnings) Compiling jalview-js/src/jalview/viewmodel build 14-Mar-2019 06:04:54 [exec] (Found 2637 warnings) Compiling jalview-js/src/jalview/viewmodel/annotationfilter build 14-Mar-2019 06:04:54 [exec] (Found 2637 warnings) Compiling jalview-js/src/jalview/viewmodel/seqfeatures build 14-Mar-2019 06:04:54 [exec] (Found 2637 warnings) Compiling jalview-js/src/jalview/viewmodel/styles build 14-Mar-2019 06:04:54 [exec] (Found 2637 warnings) Compiling jalview-js/src/jalview/workers build 14-Mar-2019 06:04:54 [exec] (Found 2642 warnings) Compiling jalview-js/src/jalview/workers build 14-Mar-2019 06:04:54 [exec] (Found 2643 warnings) Compiling jalview-js/src/jalview/workers build 14-Mar-2019 06:04:54 [exec] (Found 2644 warnings) Compiling jalview-js/src/jalview/workers build 14-Mar-2019 06:04:54 [exec] (Found 2644 warnings) Compiling jalview-js/src/jalview/ws build 14-Mar-2019 06:04:54 [exec] (Found 2648 warnings) Compiling jalview-js/src/jalview/ws build 14-Mar-2019 06:04:54 [exec] (Found 2648 warnings) Compiling jalview-js/src/jalview/ws/dbsources build 14-Mar-2019 06:04:54 [exec] (Found 2650 warnings) Compiling jalview-js/src/jalview/ws/dbsources build 14-Mar-2019 06:04:54 [exec] (Found 2651 warnings) Compiling jalview-js/src/jalview/ws/dbsources build 14-Mar-2019 06:04:54 [exec] (Found 2651 warnings) Compiling jalview-js/src/jalview/ws/ebi build 14-Mar-2019 06:04:54 [exec] (Found 2651 warnings) Compiling jalview-js/src/jalview/ws/io/mime build 14-Mar-2019 06:04:54 [exec] (Found 2651 warnings) Compiling jalview-js/src/jalview/ws/jws1 build 14-Mar-2019 06:04:54 [exec] (Found 2679 warnings) Compiling jalview-js/src/jalview/ws/jws1 build 14-Mar-2019 06:04:54 [exec] (Found 2683 warnings) Compiling jalview-js/src/jalview/ws/jws1 build 14-Mar-2019 06:04:54 [exec] (Found 2697 warnings) Compiling jalview-js/src/jalview/ws/jws1 build 14-Mar-2019 06:04:55 [exec] (Found 2711 warnings) Compiling jalview-js/src/jalview/ws/jws1 build 14-Mar-2019 06:04:55 [exec] (Found 2725 warnings) Compiling jalview-js/src/jalview/ws/jws1 build 14-Mar-2019 06:04:55 [exec] (Found 2732 warnings) Compiling jalview-js/src/jalview/ws/jws1 build 14-Mar-2019 06:04:55 [exec] (Found 2733 warnings) Compiling jalview-js/src/jalview/ws/jws2 build 14-Mar-2019 06:04:55 [exec] (Found 2734 warnings) Compiling jalview-js/src/jalview/ws/jws2 build 14-Mar-2019 06:04:55 [exec] (Found 2744 warnings) Compiling jalview-js/src/jalview/ws/jws2 build 14-Mar-2019 06:04:55 [exec] (Found 2751 warnings) Compiling jalview-js/src/jalview/ws/jws2 build 14-Mar-2019 06:04:55 [exec] (Found 2767 warnings) Compiling jalview-js/src/jalview/ws/jws2 build 14-Mar-2019 06:04:55 [exec] (Found 2770 warnings) Compiling jalview-js/src/jalview/ws/jws2 build 14-Mar-2019 06:04:55 [exec] (Found 2774 warnings) Compiling jalview-js/src/jalview/ws/jws2 build 14-Mar-2019 06:04:55 [exec] (Found 2780 warnings) Compiling jalview-js/src/jalview/ws/jws2 build 14-Mar-2019 06:04:55 [exec] (Found 2786 warnings) Compiling jalview-js/src/jalview/ws/jws2 build 14-Mar-2019 06:04:55 [exec] (Found 2800 warnings) Compiling jalview-js/src/jalview/ws/jws2 build 14-Mar-2019 06:04:55 [exec] (Found 2803 warnings) Compiling jalview-js/src/jalview/ws/jws2 build 14-Mar-2019 06:04:55 [exec] (Found 2807 warnings) Compiling jalview-js/src/jalview/ws/jws2 build 14-Mar-2019 06:04:55 [exec] (Found 2832 warnings) Compiling jalview-js/src/jalview/ws/jws2 build 14-Mar-2019 06:04:55 [exec] (Found 2855 warnings) Compiling jalview-js/src/jalview/ws/jws2 build 14-Mar-2019 06:04:55 [exec] (Found 2856 warnings) Compiling jalview-js/src/jalview/ws/jws2 build 14-Mar-2019 06:04:55 [exec] (Found 2861 warnings) Compiling jalview-js/src/jalview/ws/jws2 build 14-Mar-2019 06:04:55 [exec] (Found 2867 warnings) Compiling jalview-js/src/jalview/ws/jws2/dm build 14-Mar-2019 06:04:55 [exec] (Found 2871 warnings) Compiling jalview-js/src/jalview/ws/jws2/dm build 14-Mar-2019 06:04:55 [exec] (Found 2874 warnings) Compiling jalview-js/src/jalview/ws/jws2/dm build 14-Mar-2019 06:04:55 [exec] (Found 2885 warnings) Compiling jalview-js/src/jalview/ws/jws2/dm build 14-Mar-2019 06:04:55 [exec] (Found 2892 warnings) Compiling jalview-js/src/jalview/ws/jws2/jabaws2 build 14-Mar-2019 06:04:55 [exec] (Found 2892 warnings) Compiling jalview-js/src/jalview/ws/params build 14-Mar-2019 06:04:55 [exec] (Found 2893 warnings) Compiling jalview-js/src/jalview/ws/params build 14-Mar-2019 06:04:55 [exec] (Found 2893 warnings) Compiling jalview-js/src/jalview/ws/params/simple build 14-Mar-2019 06:04:55 [exec] (Found 2894 warnings) Compiling jalview-js/src/jalview/ws/params/simple build 14-Mar-2019 06:04:55 [exec] (Found 2894 warnings) Compiling jalview-js/src/jalview/ws/rest build 14-Mar-2019 06:04:55 [exec] (Found 2895 warnings) Compiling jalview-js/src/jalview/ws/rest build 14-Mar-2019 06:04:55 [exec] (Found 2900 warnings) Compiling jalview-js/src/jalview/ws/rest build 14-Mar-2019 06:04:55 [exec] (Found 2901 warnings) Compiling jalview-js/src/jalview/ws/rest build 14-Mar-2019 06:04:55 [exec] (Found 2902 warnings) Compiling jalview-js/src/jalview/ws/rest build 14-Mar-2019 06:04:55 [exec] (Found 2908 warnings) Compiling jalview-js/src/jalview/ws/rest build 14-Mar-2019 06:04:55 [exec] (Found 2917 warnings) Compiling jalview-js/src/jalview/ws/rest build 14-Mar-2019 06:04:55 [exec] (Found 2923 warnings) Compiling jalview-js/src/jalview/ws/rest build 14-Mar-2019 06:04:55 [exec] (Found 2923 warnings) Compiling jalview-js/src/jalview/ws/rest/params build 14-Mar-2019 06:04:55 [exec] (Found 2926 warnings) Compiling jalview-js/src/jalview/ws/seqfetcher build 14-Mar-2019 06:04:55 [exec] (Found 2926 warnings) Compiling jalview-js/src/jalview/ws/sifts build 14-Mar-2019 06:04:55 [exec] (Found 2930 warnings) Compiling jalview-js/src/jalview/ws/sifts build 14-Mar-2019 06:04:55 [exec] (Found 2933 warnings) Compiling jalview-js/src/jalview/ws/uimodel build 14-Mar-2019 06:04:55 [exec] (Found 2934 warnings) Compiling jalview-js/src/jalview/ws/utils build 14-Mar-2019 06:04:55 [exec] (Found 2934 warnings) Compiling jalview-js/src/jalview/xml/binding/embl build 14-Mar-2019 06:04:55 [exec] (Found 2934 warnings) Compiling jalview-js/src/jalview/xml/binding/jalview build 14-Mar-2019 06:04:55 [exec] (Found 2934 warnings) Compiling jalview-js/src/jalview/xml/binding/sifts build 14-Mar-2019 06:04:55 [exec] (Found 2934 warnings) Compiling jalview-js/src/jalview/xml/binding/uniprot build 14-Mar-2019 06:04:55 [exec] (Found 2937 warnings) Compiling jalview-js/src/mc_view build 14-Mar-2019 06:04:55 [exec] (Found 2938 warnings) Compiling jalview-js/src/mc_view build 14-Mar-2019 06:04:55 [exec] (Found 2941 warnings) Compiling jalview-js/src/mc_view build 14-Mar-2019 06:04:55 [exec] (Found 2942 warnings) Compiling jalview-js/src/mc_view build 14-Mar-2019 06:04:55 [exec] (Found 2943 warnings) Compiling jalview-js/src/mc_view build 14-Mar-2019 06:04:55 [exec] (Found 2943 warnings) Compiling jalview-js/src/org/apache/harmony/luni/util build 14-Mar-2019 06:04:55 [exec] (Found 2943 warnings) Compiling jalview-js/src/org/apache/tools/bzip2 build 14-Mar-2019 06:04:55 [exec] (Found 2947 warnings) Compiling jalview-js/src/org/apache/tools/bzip2 build 14-Mar-2019 06:04:55 [exec] (Found 2947 warnings) Compiling jalview-js/src/org/jibble/epsgraphics build 14-Mar-2019 06:04:55 [exec] (Found 2948 warnings) Compiling jalview-js/src/org/jibble/epsgraphics build 14-Mar-2019 06:04:55 [exec] (Found 2954 warnings) Compiling jalview-js/src/org/jibble/epsgraphics build 14-Mar-2019 06:04:55 [exec] (Found 2954 warnings) Compiling jalview-js/src/org/stackoverflowusers/file build 14-Mar-2019 06:04:55 [exec] (Found 2954 warnings) Compiling jalview-js/src/org/xml/sax build 14-Mar-2019 06:04:55 [exec] (Found 2955 warnings) Compiling jalview-js/src/org/xml/sax build 14-Mar-2019 06:04:55 [exec] (Found 2956 warnings) Compiling jalview-js/src/org/xml/sax build 14-Mar-2019 06:04:55 [exec] (Found 2957 warnings) Compiling jalview-js/src/org/xml/sax build 14-Mar-2019 06:04:55 [exec] (Found 2958 warnings) Compiling jalview-js/src/org/xml/sax build 14-Mar-2019 06:04:55 [exec] j2s.compiler.status = enable build 14-Mar-2019 06:04:55 [exec] j2s.site.directory = null build 14-Mar-2019 06:04:55 [exec] j2s.log.methods.declared = null build 14-Mar-2019 06:04:55 [exec] j2s.log.methods.called = null build 14-Mar-2019 06:04:55 [exec] j2s.excluded.paths = test;testng;util build 14-Mar-2019 06:04:55 [exec] j2s.compiler.nonqualified.packages = null build 14-Mar-2019 06:04:55 [exec] j2s.compiler.nonqualified.classes = null build 14-Mar-2019 06:04:55 [exec] j2s.compiler.mode = null build 14-Mar-2019 06:04:55 [exec] j2s.class.replacements = org.apache.log4j.->jalview.javascript.log4j. build 14-Mar-2019 06:04:55 [exec] j2s.template.html = null build 14-Mar-2019 06:04:55 [exec] using HTML template /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js/template.html build 14-Mar-2019 06:04:55 [exec] (Found 2959 warnings) Compiling jalview-js/src/uk/ac/ebi/picr/model build 14-Mar-2019 06:04:55 [exec] (Found 2961 warnings) Compiling jalview-js/src/uk/ac/ebi/picr/model build 14-Mar-2019 06:04:55 [exec] (Found 2962 warnings) Compiling jalview-js/src/uk/ac/ebi/picr/model build 14-Mar-2019 06:04:55 [exec] (Found 2964 warnings) Compiling jalview-js/src/uk/ac/ebi/picr/model build 14-Mar-2019 06:04:55 [exec] (Found 2967 warnings) Compiling jalview-js/src/uk/ac/ebi/www build 14-Mar-2019 06:04:55 [exec] (Found 2970 warnings) Compiling jalview-js/src/uk/ac/ebi/www build 14-Mar-2019 06:04:55 [exec] (Found 2973 warnings) Compiling jalview-js/src/uk/ac/ebi/www build 14-Mar-2019 06:04:55 [exec] (Found 2980 warnings) Compiling jalview-js/src/uk/ac/ebi/www build 14-Mar-2019 06:04:55 [exec] (Found 3028 warnings) Compiling jalview-js/src/uk/ac/ebi/www build 14-Mar-2019 06:04:55 [exec] (Found 3070 warnings) Compiling jalview-js/src/uk/ac/ebi/www/picr/AccessionMappingService build 14-Mar-2019 06:04:55 [exec] (Found 3077 warnings) Compiling jalview-js/src/uk/ac/ebi/www/picr/AccessionMappingService build 14-Mar-2019 06:04:55 [exec] (Found 3077 warnings) Compiling jalview-js/src/vamsas build 14-Mar-2019 06:04:55 [exec] (Found 3078 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3080 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3081 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3083 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3084 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3086 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3087 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3089 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3090 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3092 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3093 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3095 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3096 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3098 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3099 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3101 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3102 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3103 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3105 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3107 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3108 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] (Found 3110 warnings) Compiling jalview-js/src/vamsas/objects/simple build 14-Mar-2019 06:04:55 [exec] building JavaScript /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js build 14-Mar-2019 06:04:55 [exec] class replacement org.apache.log4j. --> jalview.javascript.log4j. build 14-Mar-2019 06:04:55 [exec] transpiling SourceFile[/jalview-js/src/com/github/reinert/jjschema/Attributes.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/AmpersandRule.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Any.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/BackG.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/BackMatch.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/BackRefRule.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Backup.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/BasicStringBufferLike.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Bits.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Boundary.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Bracket.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/CaseMgr.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/ChangeRule.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/CodeRule.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Ctrl.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Custom.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/CustomEndpoint.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/DirFileRegex.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/DotMulti.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/End.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/FastBracket.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/FastMulti.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/FileRegex.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Group.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/LeftRule.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Multi.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/MultiMin.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/Multi_stage2.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/NoPattern.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/NonDirFileRegex.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/NotImplementedError.java] build 14-Mar-2019 06:04:56 [exec] transpiling SourceFile[/jalview-js/src/com/stevesoft/pat/NullPattern.java] build 14-Mar-2019 06:04:56 [exec] transpiling 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SourceFile[/jalview-js/src/jalview/gui/JalviewAppender.java] build 14-Mar-2019 06:05:09 [exec] org.apache.log4j.WriterAppender -> jalview.javascript.log4j.WriterAppender build 14-Mar-2019 06:05:09 [exec] org.apache.log4j.spi.LoggingEvent -> jalview.javascript.log4j.spi.LoggingEvent build 14-Mar-2019 06:05:09 [exec] org.apache.log4j.spi.LoggingEvent -> jalview.javascript.log4j.spi.LoggingEvent build 14-Mar-2019 06:05:09 [exec] transpiling SourceFile[/jalview-js/src/jalview/gui/JalviewChangeSupport.java] build 14-Mar-2019 06:05:09 [exec] transpiling SourceFile[/jalview-js/src/jalview/gui/JalviewChimeraBindingModel.java] build 14-Mar-2019 06:05:09 [exec] transpiling SourceFile[/jalview-js/src/jalview/gui/JalviewColourChooser.java] build 14-Mar-2019 06:05:09 [exec] default method Ljalview/gui/JalviewColourChooser$ColourChooserListener;.cancel()V build 14-Mar-2019 06:05:09 [exec] transpiling SourceFile[/jalview-js/src/jalview/gui/JalviewDialog.java] build 14-Mar-2019 06:05:09 [exec] 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SourceFile[/jalview-js/src/jalview/schemabinding/version2/PdbentryItem.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/Pdbids.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/Property.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/RnaViewer.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/SecondaryStructure.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/Sequence.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/SequenceSet.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/SequenceSetProperties.java] build 14-Mar-2019 06:05:14 [exec] transpiling 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SourceFile[/jalview-js/src/jalview/schemabinding/version2/VamsasModel.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/Viewport.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/WebServiceParameterSet.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/descriptors/AlcodMapDescriptor.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/descriptors/AlcodonDescriptor.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/descriptors/AlcodonFrameDescriptor.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/descriptors/AnnotationColourSchemeDescriptor.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/descriptors/AnnotationColoursDescriptor.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/descriptors/AnnotationDescriptor.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/descriptors/AnnotationElementDescriptor.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/descriptors/CalcIdParamDescriptor.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/descriptors/ColourDescriptor.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/descriptors/CompoundMatcherDescriptor.java] build 14-Mar-2019 06:05:14 [exec] transpiling SourceFile[/jalview-js/src/jalview/schemabinding/version2/descriptors/DBRefDescriptor.java] build 14-Mar-2019 06:05:14 [exec] 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14-Mar-2019 06:05:18 [exec] transpiling SourceFile[/jalview-js/src/vamsas/objects/simple/SequenceSet_Helper.java] build 14-Mar-2019 06:05:18 [exec] transpiling SourceFile[/jalview-js/src/vamsas/objects/simple/Sequence_Helper.java] build 14-Mar-2019 06:05:18 [exec] transpiling SourceFile[/jalview-js/src/vamsas/objects/simple/WsJobId.java] build 14-Mar-2019 06:05:18 [exec] transpiling SourceFile[/jalview-js/src/vamsas/objects/simple/WsJobId_Helper.java] build 14-Mar-2019 06:05:18 [exec] build finished /home/bamboo/buildtools/eclipse/eclipse-js-workspace/jalview-js build 14-Mar-2019 06:05:18 [exec] (Found 3110 warnings) Build done build 14-Mar-2019 06:05:18 [exec] Invoking 'Faceted Project Validation Builder' on '/jalview-js'. build 14-Mar-2019 06:05:18 [exec] Validating faceted project... build 14-Mar-2019 06:05:18 [exec] Invoking 'Integrated External Tool Builder' on '/jalview-js'. build 14-Mar-2019 06:05:18 [exec] Running Jalview Release indices [Builder]... build 14-Mar-2019 06:05:18 [exec] Preparing launch delegate... build 14-Mar-2019 06:05:18 [exec] Performing pre-launch check... build 14-Mar-2019 06:05:18 [exec] Performing final launch validation... build 14-Mar-2019 06:05:18 [exec] Initializing source locator... build 14-Mar-2019 06:05:18 [exec] Launching delegate... build 14-Mar-2019 06:05:21 [exec] Eclipse: build 14-Mar-2019 06:05:21 [exec] An error has occurred. See the log file build 14-Mar-2019 06:05:21 [exec] /home/bamboo/buildtools/eclipse/eclipse-js-workspace/.metadata/.log. build 14-Mar-2019 06:05:21 [exec] Result: 13 build 14-Mar-2019 06:05:21 [exec] !SESSION 2019-03-14 06:04:06.090 ----------------------------------------------- build 14-Mar-2019 06:05:21 [exec] eclipse.buildId=4.8.0.I20180611-0500 build 14-Mar-2019 06:05:21 [exec] java.version=1.8.0_171 build 14-Mar-2019 06:05:21 [exec] java.vendor=Oracle Corporation build 14-Mar-2019 06:05:21 [exec] BootLoader constants: OS=linux, ARCH=x86_64, WS=gtk, NL=en_GB build 14-Mar-2019 06:05:21 [exec] Framework arguments: -product org.eclipse.epp.package.jee.product -application org.eclipse.jdt.apt.core.aptBuild build 14-Mar-2019 06:05:21 [exec] Command-line arguments: -os linux -ws gtk -arch x86_64 -product org.eclipse.epp.package.jee.product -clean -application org.eclipse.jdt.apt.core.aptBuild -data /home/bamboo/buildtools/eclipse/eclipse-js-workspace build 14-Mar-2019 06:05:21 [exec] build 14-Mar-2019 06:05:21 [exec] !ENTRY org.eclipse.core.resources 2 10035 2019-03-14 06:04:30.576 build 14-Mar-2019 06:05:21 [exec] !MESSAGE The workspace exited with unsaved changes in the previous session; refreshing workspace to recover changes. build 14-Mar-2019 06:05:21 [exec] build 14-Mar-2019 06:05:21 [exec] !ENTRY org.eclipse.egit.core 2 0 2019-03-14 06:04:37.536 build 14-Mar-2019 06:05:21 [exec] !MESSAGE Builtin LFS support not present/detected build 14-Mar-2019 06:05:21 [exec] !STACK 0 build 14-Mar-2019 06:05:21 [exec] java.lang.ClassNotFoundException: org.eclipse.jgit.lfs.BuiltinLFS cannot be found by org.eclipse.egit.core_5.0.0.201806131550-r build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:508) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:419) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:411) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:150) build 14-Mar-2019 06:05:21 [exec] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) build 14-Mar-2019 06:05:21 [exec] at java.lang.Class.forName0(Native Method) build 14-Mar-2019 06:05:21 [exec] at java.lang.Class.forName(Class.java:264) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.egit.core.Activator.registerBuiltinLFS(Activator.java:279) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.egit.core.Activator.start(Activator.java:212) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:779) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:1) build 14-Mar-2019 06:05:21 [exec] at java.security.AccessController.doPrivileged(Native Method) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:772) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.start(BundleContextImpl.java:729) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.startWorker0(EquinoxBundle.java:1002) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle$EquinoxModule.startWorker(EquinoxBundle.java:354) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.container.Module.doStart(Module.java:581) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.container.Module.start(Module.java:449) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.framework.util.SecureAction.start(SecureAction.java:468) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:114) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.classpath.ClasspathManager.findLocalClass(ClasspathManager.java:505) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.findLocalClass(ModuleClassLoader.java:328) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findLocalClass(BundleLoader.java:392) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:470) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:419) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:411) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:150) build 14-Mar-2019 06:05:21 [exec] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.loadClass(EquinoxBundle.java:609) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:177) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ExtensionRegistry.createExecutableExtension(ExtensionRegistry.java:931) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ConfigurationElement.createExecutableExtension(ConfigurationElement.java:243) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ConfigurationElementHandle.createExecutableExtension(ConfigurationElementHandle.java:60) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.team.core.RepositoryProvider.newProvider(RepositoryProvider.java:707) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.team.core.RepositoryProvider.mapNewProvider(RepositoryProvider.java:162) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.team.core.RepositoryProvider.mapExistingProvider(RepositoryProvider.java:233) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.team.core.RepositoryProvider.getProvider(RepositoryProvider.java:510) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.team.internal.core.TeamHookDispatcher.getProvider(TeamHookDispatcher.java:89) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.team.internal.core.TeamHookDispatcher.getRuleFactory(TeamHookDispatcher.java:95) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Rules.factoryFor(Rules.java:98) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Rules.refreshRule(Rules.java:175) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Resource.refreshLocal(Resource.java:1537) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.refresh.RefreshJob.runInWorkspace(RefreshJob.java:163) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.InternalWorkspaceJob.run(InternalWorkspaceJob.java:39) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.jobs.Worker.run(Worker.java:60) build 14-Mar-2019 06:05:21 [exec] build 14-Mar-2019 06:05:21 [exec] !ENTRY org.eclipse.osgi 4 0 2019-03-14 06:05:18.711 build 14-Mar-2019 06:05:21 [exec] !MESSAGE An error occurred while automatically activating bundle org.eclipse.ui.externaltools (786). build 14-Mar-2019 06:05:21 [exec] !STACK 0 build 14-Mar-2019 06:05:21 [exec] org.osgi.framework.BundleException: Exception in org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start() of bundle org.eclipse.ui.externaltools. build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:800) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.start(BundleContextImpl.java:729) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.startWorker0(EquinoxBundle.java:1002) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle$EquinoxModule.startWorker(EquinoxBundle.java:354) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.container.Module.doStart(Module.java:581) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.container.Module.start(Module.java:449) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.framework.util.SecureAction.start(SecureAction.java:468) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:114) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.classpath.ClasspathManager.findLocalClass(ClasspathManager.java:505) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.findLocalClass(ModuleClassLoader.java:328) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findLocalClass(BundleLoader.java:392) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:470) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:419) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:411) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:150) build 14-Mar-2019 06:05:21 [exec] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.loadClass(EquinoxBundle.java:609) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:177) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ExtensionRegistry.createExecutableExtension(ExtensionRegistry.java:931) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ConfigurationElement.createExecutableExtension(ConfigurationElement.java:243) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ConfigurationElementHandle.createExecutableExtension(ConfigurationElementHandle.java:60) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.DynamicVariable.getValue(DynamicVariable.java:48) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.resolve(StringSubstitutionEngine.java:269) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.substitute(StringSubstitutionEngine.java:192) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.performStringSubstitution(StringSubstitutionEngine.java:87) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:592) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:358) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.launchConfigurations.ExternalToolsCoreUtil.getLocation(ExternalToolsCoreUtil.java:73) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ant.internal.launching.launchConfigurations.AntLaunchDelegate.launch(AntLaunchDelegate.java:161) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:859) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:717) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:712) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.launchBuild(ExternalToolBuilder.java:183) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.doBuildBasedOnScope(ExternalToolBuilder.java:171) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.build(ExternalToolBuilder.java:90) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 14-Mar-2019 06:05:21 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 14-Mar-2019 06:05:21 [exec] Caused by: java.lang.IllegalStateException: Workbench has not been created yet. build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ui.PlatformUI.getWorkbench(PlatformUI.java:93) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start(ExternalToolsPlugin.java:254) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:779) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:1) build 14-Mar-2019 06:05:21 [exec] at java.security.AccessController.doPrivileged(Native Method) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:772) build 14-Mar-2019 06:05:21 [exec] ... 59 more build 14-Mar-2019 06:05:21 [exec] Root exception: build 14-Mar-2019 06:05:21 [exec] java.lang.IllegalStateException: Workbench has not been created yet. build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ui.PlatformUI.getWorkbench(PlatformUI.java:93) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start(ExternalToolsPlugin.java:254) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:779) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:1) build 14-Mar-2019 06:05:21 [exec] at java.security.AccessController.doPrivileged(Native Method) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:772) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.start(BundleContextImpl.java:729) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.startWorker0(EquinoxBundle.java:1002) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle$EquinoxModule.startWorker(EquinoxBundle.java:354) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.container.Module.doStart(Module.java:581) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.container.Module.start(Module.java:449) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.framework.util.SecureAction.start(SecureAction.java:468) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:114) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.classpath.ClasspathManager.findLocalClass(ClasspathManager.java:505) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.findLocalClass(ModuleClassLoader.java:328) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findLocalClass(BundleLoader.java:392) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:470) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:419) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:411) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:150) build 14-Mar-2019 06:05:21 [exec] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.loadClass(EquinoxBundle.java:609) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:177) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ExtensionRegistry.createExecutableExtension(ExtensionRegistry.java:931) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ConfigurationElement.createExecutableExtension(ConfigurationElement.java:243) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ConfigurationElementHandle.createExecutableExtension(ConfigurationElementHandle.java:60) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.DynamicVariable.getValue(DynamicVariable.java:48) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.resolve(StringSubstitutionEngine.java:269) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.substitute(StringSubstitutionEngine.java:192) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.performStringSubstitution(StringSubstitutionEngine.java:87) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:592) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:358) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.launchConfigurations.ExternalToolsCoreUtil.getLocation(ExternalToolsCoreUtil.java:73) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ant.internal.launching.launchConfigurations.AntLaunchDelegate.launch(AntLaunchDelegate.java:161) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:859) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:717) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:712) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.launchBuild(ExternalToolBuilder.java:183) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.doBuildBasedOnScope(ExternalToolBuilder.java:171) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.build(ExternalToolBuilder.java:90) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 14-Mar-2019 06:05:21 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 14-Mar-2019 06:05:21 [exec] build 14-Mar-2019 06:05:21 [exec] !ENTRY org.eclipse.core.resources 4 2 2019-03-14 06:05:18.716 build 14-Mar-2019 06:05:21 [exec] !MESSAGE Problems occurred when invoking code from plug-in: "org.eclipse.core.resources". build 14-Mar-2019 06:05:21 [exec] !STACK 1 build 14-Mar-2019 06:05:21 [exec] org.eclipse.core.runtime.CoreException: Plug-in org.eclipse.ui.externaltools was unable to load class org.eclipse.ui.externaltools.internal.variables.BuildProjectResolver. build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.throwException(RegistryStrategyOSGI.java:197) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:179) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ExtensionRegistry.createExecutableExtension(ExtensionRegistry.java:931) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ConfigurationElement.createExecutableExtension(ConfigurationElement.java:243) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ConfigurationElementHandle.createExecutableExtension(ConfigurationElementHandle.java:60) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.DynamicVariable.getValue(DynamicVariable.java:48) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.resolve(StringSubstitutionEngine.java:269) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.substitute(StringSubstitutionEngine.java:192) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.performStringSubstitution(StringSubstitutionEngine.java:87) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:592) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:358) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.launchConfigurations.ExternalToolsCoreUtil.getLocation(ExternalToolsCoreUtil.java:73) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ant.internal.launching.launchConfigurations.AntLaunchDelegate.launch(AntLaunchDelegate.java:161) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:859) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:717) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:712) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.launchBuild(ExternalToolBuilder.java:183) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.doBuildBasedOnScope(ExternalToolBuilder.java:171) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.build(ExternalToolBuilder.java:90) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 14-Mar-2019 06:05:21 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 14-Mar-2019 06:05:21 [exec] Caused by: java.lang.ClassNotFoundException: An error occurred while automatically activating bundle org.eclipse.ui.externaltools (786). build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:123) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.classpath.ClasspathManager.findLocalClass(ClasspathManager.java:505) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.findLocalClass(ModuleClassLoader.java:328) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findLocalClass(BundleLoader.java:392) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:470) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:419) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:411) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:150) build 14-Mar-2019 06:05:21 [exec] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.loadClass(EquinoxBundle.java:609) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:177) build 14-Mar-2019 06:05:21 [exec] ... 42 more build 14-Mar-2019 06:05:21 [exec] Caused by: org.osgi.framework.BundleException: Exception in org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start() of bundle org.eclipse.ui.externaltools. build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:800) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.start(BundleContextImpl.java:729) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.startWorker0(EquinoxBundle.java:1002) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle$EquinoxModule.startWorker(EquinoxBundle.java:354) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.container.Module.doStart(Module.java:581) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.container.Module.start(Module.java:449) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.framework.util.SecureAction.start(SecureAction.java:468) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:114) build 14-Mar-2019 06:05:21 [exec] ... 52 more build 14-Mar-2019 06:05:21 [exec] Caused by: java.lang.IllegalStateException: Workbench has not been created yet. build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ui.PlatformUI.getWorkbench(PlatformUI.java:93) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start(ExternalToolsPlugin.java:254) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:779) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:1) build 14-Mar-2019 06:05:21 [exec] at java.security.AccessController.doPrivileged(Native Method) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:772) build 14-Mar-2019 06:05:21 [exec] ... 59 more build 14-Mar-2019 06:05:21 [exec] !SUBENTRY 1 org.eclipse.equinox.registry 4 1 2019-03-14 06:05:18.717 build 14-Mar-2019 06:05:21 [exec] !MESSAGE Plug-in org.eclipse.ui.externaltools was unable to load class org.eclipse.ui.externaltools.internal.variables.BuildProjectResolver. build 14-Mar-2019 06:05:21 [exec] !STACK 0 build 14-Mar-2019 06:05:21 [exec] java.lang.ClassNotFoundException: An error occurred while automatically activating bundle org.eclipse.ui.externaltools (786). build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:123) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.classpath.ClasspathManager.findLocalClass(ClasspathManager.java:505) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.findLocalClass(ModuleClassLoader.java:328) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findLocalClass(BundleLoader.java:392) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:470) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:419) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:411) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:150) build 14-Mar-2019 06:05:21 [exec] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.loadClass(EquinoxBundle.java:609) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:177) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ExtensionRegistry.createExecutableExtension(ExtensionRegistry.java:931) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ConfigurationElement.createExecutableExtension(ConfigurationElement.java:243) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ConfigurationElementHandle.createExecutableExtension(ConfigurationElementHandle.java:60) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.DynamicVariable.getValue(DynamicVariable.java:48) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.resolve(StringSubstitutionEngine.java:269) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.substitute(StringSubstitutionEngine.java:192) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.performStringSubstitution(StringSubstitutionEngine.java:87) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:592) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:358) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.launchConfigurations.ExternalToolsCoreUtil.getLocation(ExternalToolsCoreUtil.java:73) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ant.internal.launching.launchConfigurations.AntLaunchDelegate.launch(AntLaunchDelegate.java:161) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:859) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:717) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:712) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.launchBuild(ExternalToolBuilder.java:183) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.doBuildBasedOnScope(ExternalToolBuilder.java:171) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.build(ExternalToolBuilder.java:90) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 14-Mar-2019 06:05:21 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 14-Mar-2019 06:05:21 [exec] Caused by: org.osgi.framework.BundleException: Exception in org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start() of bundle org.eclipse.ui.externaltools. build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:800) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.start(BundleContextImpl.java:729) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.startWorker0(EquinoxBundle.java:1002) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle$EquinoxModule.startWorker(EquinoxBundle.java:354) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.container.Module.doStart(Module.java:581) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.container.Module.start(Module.java:449) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.framework.util.SecureAction.start(SecureAction.java:468) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:114) build 14-Mar-2019 06:05:21 [exec] ... 52 more build 14-Mar-2019 06:05:21 [exec] Caused by: java.lang.IllegalStateException: Workbench has not been created yet. build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ui.PlatformUI.getWorkbench(PlatformUI.java:93) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start(ExternalToolsPlugin.java:254) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:779) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:1) build 14-Mar-2019 06:05:21 [exec] at java.security.AccessController.doPrivileged(Native Method) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:772) build 14-Mar-2019 06:05:21 [exec] ... 59 more build 14-Mar-2019 06:05:21 [exec] !SUBENTRY 1 org.eclipse.equinox.registry 4 1 2019-03-14 06:05:18.717 build 14-Mar-2019 06:05:21 [exec] !MESSAGE Plug-in org.eclipse.ui.externaltools was unable to load class org.eclipse.ui.externaltools.internal.variables.BuildProjectResolver. build 14-Mar-2019 06:05:21 [exec] !STACK 0 build 14-Mar-2019 06:05:21 [exec] java.lang.ClassNotFoundException: An error occurred while automatically activating bundle org.eclipse.ui.externaltools (786). build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:123) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.classpath.ClasspathManager.findLocalClass(ClasspathManager.java:505) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.findLocalClass(ModuleClassLoader.java:328) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findLocalClass(BundleLoader.java:392) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:470) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:419) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:411) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:150) build 14-Mar-2019 06:05:21 [exec] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.loadClass(EquinoxBundle.java:609) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:177) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ExtensionRegistry.createExecutableExtension(ExtensionRegistry.java:931) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ConfigurationElement.createExecutableExtension(ConfigurationElement.java:243) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ConfigurationElementHandle.createExecutableExtension(ConfigurationElementHandle.java:60) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.DynamicVariable.getValue(DynamicVariable.java:48) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.resolve(StringSubstitutionEngine.java:269) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.substitute(StringSubstitutionEngine.java:192) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.performStringSubstitution(StringSubstitutionEngine.java:87) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:592) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:358) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.launchConfigurations.ExternalToolsCoreUtil.getLocation(ExternalToolsCoreUtil.java:73) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ant.internal.launching.launchConfigurations.AntLaunchDelegate.launch(AntLaunchDelegate.java:161) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:859) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:717) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:712) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.launchBuild(ExternalToolBuilder.java:183) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.doBuildBasedOnScope(ExternalToolBuilder.java:171) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.build(ExternalToolBuilder.java:90) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 14-Mar-2019 06:05:21 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 14-Mar-2019 06:05:21 [exec] Caused by: org.osgi.framework.BundleException: Exception in org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start() of bundle org.eclipse.ui.externaltools. build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:800) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.start(BundleContextImpl.java:729) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.startWorker0(EquinoxBundle.java:1002) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle$EquinoxModule.startWorker(EquinoxBundle.java:354) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.container.Module.doStart(Module.java:581) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.container.Module.start(Module.java:449) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.framework.util.SecureAction.start(SecureAction.java:468) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:114) build 14-Mar-2019 06:05:21 [exec] ... 52 more build 14-Mar-2019 06:05:21 [exec] Caused by: java.lang.IllegalStateException: Workbench has not been created yet. build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ui.PlatformUI.getWorkbench(PlatformUI.java:93) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start(ExternalToolsPlugin.java:254) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:779) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:1) build 14-Mar-2019 06:05:21 [exec] at java.security.AccessController.doPrivileged(Native Method) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:772) build 14-Mar-2019 06:05:21 [exec] ... 59 more build 14-Mar-2019 06:05:21 [exec] build 14-Mar-2019 06:05:21 [exec] !ENTRY org.eclipse.osgi 4 0 2019-03-14 06:05:18.842 build 14-Mar-2019 06:05:21 [exec] !MESSAGE Application error build 14-Mar-2019 06:05:21 [exec] !STACK 1 build 14-Mar-2019 06:05:21 [exec] org.eclipse.core.internal.resources.ResourceException: Errors occurred during the build. build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:517) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 14-Mar-2019 06:05:21 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 14-Mar-2019 06:05:21 [exec] Contains: Errors running builder 'Integrated External Tool Builder' on project 'jalview-js'. build 14-Mar-2019 06:05:21 [exec] org.eclipse.core.runtime.CoreException: Plug-in org.eclipse.ui.externaltools was unable to load class org.eclipse.ui.externaltools.internal.variables.BuildProjectResolver. build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.throwException(RegistryStrategyOSGI.java:197) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:179) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ExtensionRegistry.createExecutableExtension(ExtensionRegistry.java:931) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ConfigurationElement.createExecutableExtension(ConfigurationElement.java:243) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ConfigurationElementHandle.createExecutableExtension(ConfigurationElementHandle.java:60) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.DynamicVariable.getValue(DynamicVariable.java:48) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.resolve(StringSubstitutionEngine.java:269) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.substitute(StringSubstitutionEngine.java:192) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.performStringSubstitution(StringSubstitutionEngine.java:87) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:592) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:358) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.launchConfigurations.ExternalToolsCoreUtil.getLocation(ExternalToolsCoreUtil.java:73) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ant.internal.launching.launchConfigurations.AntLaunchDelegate.launch(AntLaunchDelegate.java:161) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:859) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:717) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:712) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.launchBuild(ExternalToolBuilder.java:183) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.doBuildBasedOnScope(ExternalToolBuilder.java:171) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.build(ExternalToolBuilder.java:90) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 14-Mar-2019 06:05:21 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 14-Mar-2019 06:05:21 [exec] Caused by: java.lang.ClassNotFoundException: An error occurred while automatically activating bundle org.eclipse.ui.externaltools (786). build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:123) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.classpath.ClasspathManager.findLocalClass(ClasspathManager.java:505) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.findLocalClass(ModuleClassLoader.java:328) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findLocalClass(BundleLoader.java:392) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:470) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:419) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:411) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:150) build 14-Mar-2019 06:05:21 [exec] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.loadClass(EquinoxBundle.java:609) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:177) build 14-Mar-2019 06:05:21 [exec] ... 42 more build 14-Mar-2019 06:05:21 [exec] Caused by: org.osgi.framework.BundleException: Exception in org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start() of bundle org.eclipse.ui.externaltools. build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:800) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.start(BundleContextImpl.java:729) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.startWorker0(EquinoxBundle.java:1002) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle$EquinoxModule.startWorker(EquinoxBundle.java:354) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.container.Module.doStart(Module.java:581) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.container.Module.start(Module.java:449) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.framework.util.SecureAction.start(SecureAction.java:468) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:114) build 14-Mar-2019 06:05:21 [exec] ... 52 more build 14-Mar-2019 06:05:21 [exec] Caused by: java.lang.IllegalStateException: Workbench has not been created yet. build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ui.PlatformUI.getWorkbench(PlatformUI.java:93) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start(ExternalToolsPlugin.java:254) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:779) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:1) build 14-Mar-2019 06:05:21 [exec] at java.security.AccessController.doPrivileged(Native Method) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:772) build 14-Mar-2019 06:05:21 [exec] ... 59 more build 14-Mar-2019 06:05:21 [exec] Contains: Plug-in org.eclipse.ui.externaltools was unable to load class org.eclipse.ui.externaltools.internal.variables.BuildProjectResolver. build 14-Mar-2019 06:05:21 [exec] java.lang.ClassNotFoundException: An error occurred while automatically activating bundle org.eclipse.ui.externaltools (786). build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:123) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.classpath.ClasspathManager.findLocalClass(ClasspathManager.java:505) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.findLocalClass(ModuleClassLoader.java:328) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findLocalClass(BundleLoader.java:392) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:470) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:419) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:411) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:150) build 14-Mar-2019 06:05:21 [exec] at java.lang.ClassLoader.loadClass(ClassLoader.java:357) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.loadClass(EquinoxBundle.java:609) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:177) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ExtensionRegistry.createExecutableExtension(ExtensionRegistry.java:931) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ConfigurationElement.createExecutableExtension(ConfigurationElement.java:243) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.registry.ConfigurationElementHandle.createExecutableExtension(ConfigurationElementHandle.java:60) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.DynamicVariable.getValue(DynamicVariable.java:48) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.resolve(StringSubstitutionEngine.java:269) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.substitute(StringSubstitutionEngine.java:192) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringSubstitutionEngine.performStringSubstitution(StringSubstitutionEngine.java:87) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:592) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.variables.StringVariableManager.performStringSubstitution(StringVariableManager.java:358) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.launchConfigurations.ExternalToolsCoreUtil.getLocation(ExternalToolsCoreUtil.java:73) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ant.internal.launching.launchConfigurations.AntLaunchDelegate.launch(AntLaunchDelegate.java:161) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:859) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:717) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.debug.internal.core.LaunchConfiguration.launch(LaunchConfiguration.java:712) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.launchBuild(ExternalToolBuilder.java:183) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.doBuildBasedOnScope(ExternalToolBuilder.java:171) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.externaltools.internal.model.ExternalToolBuilder.build(ExternalToolBuilder.java:90) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager$2.run(BuildManager.java:795) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:216) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:259) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager$1.run(BuildManager.java:312) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuild(BuildManager.java:315) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.basicBuildLoop(BuildManager.java:367) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.events.BuildManager.build(BuildManager.java:388) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Workspace.buildInternal(Workspace.java:501) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.internal.resources.Workspace.build(Workspace.java:401) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.jdt.apt.core.build.AptBuilder.start(AptBuilder.java:56) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:388) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:243) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) build 14-Mar-2019 06:05:21 [exec] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) build 14-Mar-2019 06:05:21 [exec] at java.lang.reflect.Method.invoke(Method.java:498) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:656) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.basicRun(Main.java:592) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.run(Main.java:1498) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.equinox.launcher.Main.main(Main.java:1471) build 14-Mar-2019 06:05:21 [exec] Caused by: org.osgi.framework.BundleException: Exception in org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start() of bundle org.eclipse.ui.externaltools. build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:800) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.start(BundleContextImpl.java:729) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle.startWorker0(EquinoxBundle.java:1002) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.EquinoxBundle$EquinoxModule.startWorker(EquinoxBundle.java:354) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.container.Module.doStart(Module.java:581) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.container.Module.start(Module.java:449) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.framework.util.SecureAction.start(SecureAction.java:468) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.hooks.EclipseLazyStarter.postFindLocalClass(EclipseLazyStarter.java:114) build 14-Mar-2019 06:05:21 [exec] ... 52 more build 14-Mar-2019 06:05:21 [exec] Caused by: java.lang.IllegalStateException: Workbench has not been created yet. build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ui.PlatformUI.getWorkbench(PlatformUI.java:93) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.ui.externaltools.internal.model.ExternalToolsPlugin.start(ExternalToolsPlugin.java:254) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:779) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl$3.run(BundleContextImpl.java:1) build 14-Mar-2019 06:05:21 [exec] at java.security.AccessController.doPrivileged(Native Method) build 14-Mar-2019 06:05:21 [exec] at org.eclipse.osgi.internal.framework.BundleContextImpl.startActivator(BundleContextImpl.java:772) build 14-Mar-2019 06:05:21 [exec] ... 59 more build 14-Mar-2019 06:05:21 [exec] build 14-Mar-2019 06:05:21 [exec] !ENTRY org.eclipse.core.resources 2 10035 2019-03-14 06:05:19.696 build 14-Mar-2019 06:05:21 [exec] !MESSAGE The workspace will exit with unsaved changes in this session. build 14-Mar-2019 06:05:22 [copy] Copying 1176 files to /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site build 14-Mar-2019 06:05:23 [copy] Copied 144 empty directories to 5 empty directories under /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site build 14-Mar-2019 06:05:23 build 14-Mar-2019 06:05:23 unzip-to-site: build 14-Mar-2019 06:05:23 [unzip] Expanding: /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/libjs/MiGLayout-site.zip into /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site build 14-Mar-2019 06:05:23 [unzip] Expanding: /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/libjs/VARNA-site.zip into /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site build 14-Mar-2019 06:05:23 [unzip] Expanding: /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/libjs/jmol-app.zip into /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site build 14-Mar-2019 06:05:23 [unzip] Expanding: /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/libjs/json-site.zip into /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site build 14-Mar-2019 06:05:23 [copy] Copying 29 files to /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site/swingjs/j2s build 14-Mar-2019 06:05:23 [copy] Copying 44 files to /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site/examples build 14-Mar-2019 06:05:24 [unzip] Expanding: /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/swingjs/SwingJS-site.zip into /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site build 14-Mar-2019 06:05:24 build 14-Mar-2019 06:05:24 build-site: build 14-Mar-2019 06:05:24 [tar] Building tar: /srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1/site.tar.gz build 14-Mar-2019 06:05:26 build 14-Mar-2019 06:05:26 BUILD SUCCESSFUL build 14-Mar-2019 06:05:26 Total time: 1 minute 36 seconds simple 14-Mar-2019 06:05:26 Finished task 'run jalviewjs build' with result: Success simple 14-Mar-2019 06:05:26 Running post build plugin 'NCover Results Collector' simple 14-Mar-2019 06:05:26 Running post build plugin 'Artifact Copier' simple 14-Mar-2019 06:05:26 Publishing an artifact: jalviewjs-site.tar.gz simple 14-Mar-2019 06:05:26 Finished publishing of artifact Shared artifact: [jalviewjs-site.tar.gz], pattern: [site.tar.gz] anchored at: [./] in 102.7 ms simple 14-Mar-2019 06:05:26 Publishing an artifact: jalviewjs simple 14-Mar-2019 06:05:27 Finished publishing of artifact Shared artifact: [jalviewjs], pattern: [**/*] anchored at: [site/] in 1.232 s simple 14-Mar-2019 06:05:27 Running post build plugin 'Artifactory Release Management Staging' simple 14-Mar-2019 06:05:27 Running post build plugin 'Artifactory Build Info Copier' simple 14-Mar-2019 06:05:27 Running post build plugin 'Artifactory Gradle Properties Info Copier' simple 14-Mar-2019 06:05:27 Running post build plugin 'npm Cache Cleanup' simple 14-Mar-2019 06:05:27 Running post build plugin 'Clover Results Collector' simple 14-Mar-2019 06:05:27 Running post build plugin 'Docker Container Cleanup' simple 14-Mar-2019 06:05:28 Successfully removed working directory at '/srv/bamboo/bamboo-home/xml-data/build-dir/JB-JB0-JOB1' simple 14-Mar-2019 06:05:28 Finalising the build... simple 14-Mar-2019 06:05:28 Stopping timer. simple 14-Mar-2019 06:05:28 Build JB-JB0-JOB1-2 completed. simple 14-Mar-2019 06:05:28 Running on server: post build plugin 'NCover Results Collector' simple 14-Mar-2019 06:05:28 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 14-Mar-2019 06:05:28 Running on server: post build plugin 'Clover Delta Calculator' simple 14-Mar-2019 06:05:28 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 14-Mar-2019 06:05:28 All post build plugins have finished simple 14-Mar-2019 06:05:28 Generating build results summary... simple 14-Mar-2019 06:05:28 Saving build results to disk... simple 14-Mar-2019 06:05:28 Logging substituted variables... simple 14-Mar-2019 06:05:28 Indexing build results... simple 14-Mar-2019 06:05:28 Finished building JB-JB0-JOB1-2.