simple 05-Jan-2026 21:52:27 Build Jalview Builds - Gradle JalviewJS Build - bug-JAL-4107_jalviewjs_fixes_on_2_12_branch - Default Job #1 (JB-GJB58-JOB1-1) started building on agent Default Agent simple 05-Jan-2026 21:52:27 simple 05-Jan-2026 21:52:27 Build working directory is /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1 simple 05-Jan-2026 21:52:27 Executing build Jalview Builds - Gradle JalviewJS Build - bug-JAL-4107_jalviewjs_fixes_on_2_12_branch - Default Job #1 (JB-GJB58-JOB1-1) simple 05-Jan-2026 21:52:27 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' simple 05-Jan-2026 21:52:27 Checking out into /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1 simple 05-Jan-2026 21:52:27 Updating source code to revision: b6ff7e553d3ba8b32e1d2650df7860706b2a37d5 simple 05-Jan-2026 21:52:27 Fetching 'refs/heads/bug/JAL-4107_jalviewjs_fixes_on_2_12_branch' from 'https://gitlab.jalview.org/jalview/jalview.git'. simple 05-Jan-2026 21:52:27 Checking out revision b6ff7e553d3ba8b32e1d2650df7860706b2a37d5. simple 05-Jan-2026 21:52:27 Creating local git repository in '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/.git'. simple 05-Jan-2026 21:52:27 Cloning into '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1'... simple 05-Jan-2026 21:52:27 done. simple 05-Jan-2026 21:52:33 Switched to a new branch 'bug/JAL-4107_jalviewjs_fixes_on_2_12_branch' simple 05-Jan-2026 21:52:33 Branch bug/JAL-4107_jalviewjs_fixes_on_2_12_branch set up to track remote branch bug/JAL-4107_jalviewjs_fixes_on_2_12_branch from origin. simple 05-Jan-2026 21:52:33 Updated source code to revision: b6ff7e553d3ba8b32e1d2650df7860706b2a37d5 simple 05-Jan-2026 21:52:33 Finished task 'Checkout Default Repository' with result: Success simple 05-Jan-2026 21:52:33 Running pre-build action: VCS Version Collector simple 05-Jan-2026 21:52:33 Running pre-build action: Artifactory Release Staging simple 05-Jan-2026 21:52:33 Starting task 'JalviewJS build site and distributable tar' of type 'org.jfrog.bamboo.bamboo-artifactory-plugin:artifactoryGradleTask' simple 05-Jan-2026 21:52:33 Bamboo Artifactory Plugin version: 2.6.2 command 05-Jan-2026 21:52:33 Beginning to execute external process for build 'Jalview Builds - Gradle JalviewJS Build - bug-JAL-4107_jalviewjs_fixes_on_2_12_branch - Default Job #1 (JB-GJB58-JOB1-1)'\n ... running command line: \n/home/bamboo/buildtools/gradle/bin/gradle -x test -PJAVA_VERSION=11 -Pjalviewjs_eclipse_root=~/buildtools/eclipse/latest --info clean eclipse jalviewjsCreateJ2sSettings jalviewjs jalviewjsSiteTar\n ... in: /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1\n ... using extra environment variables: \nbamboo_planRepository_1_branch=bug/JAL-4107_jalviewjs_fixes_on_2_12_branch\nbamboo_repository_48168975_branch_name=bug/JAL-4107_jalviewjs_fixes_on_2_12_branch\nbamboo_capability_system_builder_maven_Artifactory_Maven_3=/usr\nCATALINA_PID=/home/bamboo/latest/work/bamboo.pid\nbamboo_planRepository_1_branchDisplayName=bug/JAL-4107_jalviewjs_fixes_on_2_12_branch\nbamboo_repository_revision_number=b6ff7e553d3ba8b32e1d2650df7860706b2a37d5\nbamboo_resultsUrl=https://builds.jalview.org/browse/JB-GJB58-JOB1-1\nJAVA_OPTS=-Xms512m -Xmx1024m -Dbamboo.home=/srv/bamboo/bamboo-home -Djdk.tls.ephemeralDHKeySize=2048\nbamboo_build_working_directory=/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1\nbamboo_planRepository_1_name=Jalview Gitlab\nbamboo_buildKey=JB-GJB58-JOB1\nbamboo_shortPlanName=bug-JAL-4107_jalviewjs_fixes_on_2_12_branch\nbamboo_planRepository_name=Jalview Gitlab\nLOGNAME=bamboo\nbamboo_buildNumber=1\nPWD=/\nbamboo_capability_system_builder_command_Eclipse_2019_09=/home/bamboo/buildtools/eclipse/jee-2019-09/eclipse/eclipse\nbamboo_shortJobName=Default Job\nbamboo_buildResultsUrl=https://builds.jalview.org/browse/JB-GJB58-JOB1-1\nbamboo_planRepository_repositoryUrl=https://gitlab.jalview.org/jalview/jalview.git\nSHELL=/bin/bash\nbamboo_agentId=196609\nbamboo_planName=Jalview Builds - Gradle JalviewJS Build - bug-JAL-4107_jalviewjs_fixes_on_2_12_branch\nbamboo_shortPlanKey=GJB58\nbamboo_shortJobKey=JOB1\nbamboo_repository_48168975_name=Jalview Gitlab\nbamboo_capability_system_jdk_OpenJDK_11=/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk\nbamboo_planRepository_revision=b6ff7e553d3ba8b32e1d2650df7860706b2a37d5\nbamboo_buildTimeStamp=2026-01-05T21:52:27.203Z\nbamboo_repository_48168975_git_username=\nbamboo_repository_48168975_revision_number=b6ff7e553d3ba8b32e1d2650df7860706b2a37d5\nbamboo_repository_git_branch=bug/JAL-4107_jalviewjs_fixes_on_2_12_branch\nbamboo_buildResultKey=JB-GJB58-JOB1-1\nbamboo_repository_branch_name=bug/JAL-4107_jalviewjs_fixes_on_2_12_branch\nbamboo_buildPlanName=Jalview Builds - Gradle JalviewJS Build - bug-JAL-4107_jalviewjs_fixes_on_2_12_branch - Default Job\nbamboo_capability_system_builder_ant_j11_Ant=/home/bamboo/buildtools/j11/ant-j11\nbamboo_planRepository_1_revision=b6ff7e553d3ba8b32e1d2650df7860706b2a37d5\nSHLVL=1\nbamboo_capability_system_builder_ant_x11_Ant=/home/bamboo/buildtools/x11-ant\nbamboo_repository_name=Jalview Gitlab\nJAVA_HOME=/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/\nLANG=en_GB.UTF-8\nbamboo_buildFailed=false\nbamboo_capability_system_jdk_OpenJDK_8=/home/bamboo/buildtools/jdk/jdk-8-linux-x64/jdk\nbamboo_planRepository_branch=bug/JAL-4107_jalviewjs_fixes_on_2_12_branch\nbamboo_agentWorkingDirectory=/srv/bamboo/bamboo-home/xml-data/build-dir/196609\nbamboo_capability_system_git_executable=/bin/git\nbamboo_repository_git_username=\nbamboo_planRepository_branchDisplayName=bug/JAL-4107_jalviewjs_fixes_on_2_12_branch\nbamboo_planRepository_1_type=gitv2\nbamboo_planRepository_branchName=bug/JAL-4107_jalviewjs_fixes_on_2_12_branch\n_=/usr/bin/java\nbamboo_capability_system_builder_ant_j11_x11_Ant=/home/bamboo/buildtools/j11/x11-ant-j11\nbamboo_capability_system_builderivy_Ivy=/usr\nbamboo_plan_storageTag=plan-47972381\nbamboo_capability_system_builder_gradle_Gradle=/home/bamboo/buildtools/gradle\nbamboo_hg_cache_directory=/srv/bamboo/bamboo-home/xml-data/build-dir/_hg-repositories-cache\nbamboo_planRepository_1_username=\nbamboo_planRepository_type=gitv2\nUSER=bamboo\nbamboo_git_cache_directory=/srv/bamboo/bamboo-home/xml-data/build-dir/_git-repositories-cache\nbamboo_repository_git_repositoryUrl=https://gitlab.jalview.org/jalview/jalview.git\nbamboo_capability_system_builder_ant_Ant=/usr/share/ant\nbamboo_capability_system_builder_mvn3_Maven_3=/usr/share/maven\nbamboo_tmp_directory=/srv/bamboo/bamboo-home/temp\nbamboo_working_directory=/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1\nbamboo_repository_48168975_git_branch=bug/JAL-4107_jalviewjs_fixes_on_2_12_branch\nbamboo_planKey=JB-GJB58\nbamboo_planRepository_1_repositoryUrl=https://gitlab.jalview.org/jalview/jalview.git\nbamboo_planRepository_username=\nbamboo_repository_48168975_git_repositoryUrl=https://gitlab.jalview.org/jalview/jalview.git\nHOME=/home/bamboo\nbamboo_planRepository_1_branchName=bug/JAL-4107_jalviewjs_fixes_on_2_12_branch\nPATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin\n build 05-Jan-2026 21:52:34 Initialized native services in: /srv/bamboo/home/bamboo/.gradle/native build 05-Jan-2026 21:52:34 Initialized jansi services in: /srv/bamboo/home/bamboo/.gradle/native build 05-Jan-2026 21:52:34 Removing 1 daemon stop events from registry build 05-Jan-2026 21:52:34 Starting a Gradle Daemon (subsequent builds will be faster) build 05-Jan-2026 21:52:34 Starting process 'Gradle build daemon'. Working directory: /srv/bamboo/home/bamboo/.gradle/daemon/7.4.2 Command: /srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java --add-opens java.base/java.util=ALL-UNNAMED --add-opens java.base/java.lang=ALL-UNNAMED --add-opens java.base/java.lang.invoke=ALL-UNNAMED --add-opens java.base/java.util=ALL-UNNAMED --add-opens java.prefs/java.util.prefs=ALL-UNNAMED --add-opens java.prefs/java.util.prefs=ALL-UNNAMED --add-opens java.base/java.nio.charset=ALL-UNNAMED --add-opens java.base/java.net=ALL-UNNAMED --add-opens java.base/java.util.concurrent.atomic=ALL-UNNAMED -XX:MaxMetaspaceSize=256m -XX:+HeapDumpOnOutOfMemoryError -Xms256m -Xmx512m -Dfile.encoding=UTF-8 -Duser.country=GB -Duser.language=en -Duser.variant -cp /srv/bamboo/home/bamboo/buildtools/gradle-7.4.2/lib/gradle-launcher-7.4.2.jar org.gradle.launcher.daemon.bootstrap.GradleDaemon 7.4.2 build 05-Jan-2026 21:52:34 Successfully started process 'Gradle build daemon' build 05-Jan-2026 21:52:35 An attempt to start the daemon took 1.011 secs. build 05-Jan-2026 21:52:35 The client will now receive all logging from the daemon (pid: 20996). The daemon log file: /srv/bamboo/home/bamboo/.gradle/daemon/7.4.2/daemon-20996.out.log build 05-Jan-2026 21:52:35 Starting build in new daemon [memory: 512 MiB] build 05-Jan-2026 21:52:35 Using 4 worker leases. build 05-Jan-2026 21:52:36 Watching the file system is configured to be enabled if available build 05-Jan-2026 21:52:36 File system watching is inactive build 05-Jan-2026 21:52:37 Starting Build build 05-Jan-2026 21:52:37 Settings evaluated using settings file '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/settings.gradle'. build 05-Jan-2026 21:52:37 Projects loaded. Root project using build file '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build.gradle'. build 05-Jan-2026 21:52:37 Included projects: [root project 'jalview'] build 05-Jan-2026 21:52:39 build 05-Jan-2026 21:52:39 > Configure project : build 05-Jan-2026 21:52:39 Evaluating root project 'jalview' using build file '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build.gradle'. build 05-Jan-2026 21:52:40 Using properties from file './utils/channels/default/channel_gradle.properties' build 05-Jan-2026 21:52:40 JALVIEW_VERSION is set to '2.12.0' build 05-Jan-2026 21:52:40 HEADLESS BUILD build 05-Jan-2026 21:52:40 J2S ENABLED build 05-Jan-2026 21:52:41 Using a LOCAL profile. build 05-Jan-2026 21:52:41 file or directory '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/main/java', not found build 05-Jan-2026 21:52:41 file or directory '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/resources/doc_build', not found build 05-Jan-2026 21:52:41 file or directory '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/classes', not found build 05-Jan-2026 21:52:41 eclipseDir exists build 05-Jan-2026 21:52:42 All projects evaluated. build 05-Jan-2026 21:52:42 Selected primary task 'clean' from project : build 05-Jan-2026 21:52:42 Selected primary task 'eclipse' from project : build 05-Jan-2026 21:52:42 Selected primary task 'jalviewjsCreateJ2sSettings' from project : build 05-Jan-2026 21:52:42 Selected primary task 'jalviewjs' from project : build 05-Jan-2026 21:52:42 Selected primary task 'jalviewjsSiteTar' from project : build 05-Jan-2026 21:52:42 Tasks to be executed: [task ':clean', task ':eclipseClasspath', task ':eclipseJdt', task ':eclipseProject', task ':eclipse', task ':jalviewjsCreateJ2sSettings', task ':jalviewjsEclipsePaths', task ':jalviewjsEclipseCopyDropins', task ':jalviewjsSetEclipseWorkspace', task ':jalviewjsEclipseSetup', task ':jalviewjsEnableAltFileProperty', task ':eclipseSetup', task ':jalviewjsProjectImport', task ':jalviewjsTranspile', task ':jalviewjsCopyTransferSiteJs', task ':jalviewjsTransferUnzipLib', task ':jalviewjsTransferUnzipSwingJs', task ':jalviewjsTransferUnzipAllLibs', task ':jalviewjsSyncAllLibs', task ':copyResources', task ':createBuildProperties', task ':jalviewjsSyncBuildProperties', task ':jalviewjsBuildAllCores', task ':jalviewjsPublishCoreTemplates', task ':jalviewjsSyncCore', task ':copyChannelResources', task ':buildResources', task ':jalviewjsSyncResources', task ':jalviewjsSyncSiteResources', task ':jalviewjsPrepareSite', task ':jalviewjsBuildSite', task ':cleanJalviewjsChromiumUserDir', task ':jalviewjsChromiumProfile', task ':jalviewjsCopyStderrLaunchFile', task ':jalviewjsLaunchTest', task ':jalviewjs', task ':jalviewjsSiteTar'] build 05-Jan-2026 21:52:42 Tasks that were excluded: [] build 05-Jan-2026 21:52:42 :clean (Thread[included builds,5,main]) started. build 05-Jan-2026 21:52:42 build 05-Jan-2026 21:52:42 > Task :clean build 05-Jan-2026 21:52:42 Caching disabled for task ':clean' because: build 05-Jan-2026 21:52:42 Build cache is disabled build 05-Jan-2026 21:52:42 Task ':clean' is not up-to-date because: build 05-Jan-2026 21:52:42 Task has not declared any outputs despite executing actions. build 05-Jan-2026 21:52:42 :clean (Thread[included builds,5,main]) completed. Took 0.045 secs. build 05-Jan-2026 21:52:42 :jalviewjsEclipsePaths (Thread[included builds,5,main]) started. build 05-Jan-2026 21:52:42 build 05-Jan-2026 21:52:42 > Task :jalviewjsEclipsePaths build 05-Jan-2026 21:52:42 Caching disabled for task ':jalviewjsEclipsePaths' because: build 05-Jan-2026 21:52:42 Build cache is disabled build 05-Jan-2026 21:52:42 Task ':jalviewjsEclipsePaths' is not up-to-date because: build 05-Jan-2026 21:52:42 Task has not declared any outputs despite executing actions. build 05-Jan-2026 21:52:42 Running task jalviewjsEclipsePaths as IN_ECLIPSE=false build 05-Jan-2026 21:52:42 ECLIPSE VERSION=4.28.0 build 05-Jan-2026 21:52:42 :jalviewjsEclipsePaths (Thread[included builds,5,main]) completed. Took 0.001 secs. build 05-Jan-2026 21:52:42 destroyer locations for task group 0 (Thread[included builds,5,main]) started. build 05-Jan-2026 21:52:42 destroyer locations for task group 0 (Thread[included builds,5,main]) completed. Took 0.0 secs. build 05-Jan-2026 21:52:42 :eclipseClasspath (Thread[included builds,5,main]) started. build 05-Jan-2026 21:52:42 build 05-Jan-2026 21:52:42 > Task :eclipseClasspath build 05-Jan-2026 21:52:42 Caching disabled for task ':eclipseClasspath' because: build 05-Jan-2026 21:52:42 Build cache is disabled build 05-Jan-2026 21:52:42 Task ':eclipseClasspath' is not up-to-date because: build 05-Jan-2026 21:52:42 Task.upToDateWhen is false. build 05-Jan-2026 21:52:42 :eclipseClasspath (Thread[included builds,5,main]) completed. Took 0.19 secs. build 05-Jan-2026 21:52:42 :eclipseJdt (Thread[included builds,5,main]) started. build 05-Jan-2026 21:52:42 build 05-Jan-2026 21:52:42 > Task :eclipseJdt build 05-Jan-2026 21:52:42 Caching disabled for task ':eclipseJdt' because: build 05-Jan-2026 21:52:42 Build cache is disabled build 05-Jan-2026 21:52:42 Task ':eclipseJdt' is not up-to-date because: build 05-Jan-2026 21:52:42 Task.upToDateWhen is false. build 05-Jan-2026 21:52:42 :eclipseJdt (Thread[included builds,5,main]) completed. Took 0.027 secs. build 05-Jan-2026 21:52:42 :eclipseProject (Thread[included builds,5,main]) started. build 05-Jan-2026 21:52:42 build 05-Jan-2026 21:52:42 > Task :eclipseProject build 05-Jan-2026 21:52:42 Caching disabled for task ':eclipseProject' because: build 05-Jan-2026 21:52:42 Build cache is disabled build 05-Jan-2026 21:52:42 Task ':eclipseProject' is not up-to-date because: build 05-Jan-2026 21:52:42 Task.upToDateWhen is false. build 05-Jan-2026 21:52:42 :eclipseProject (Thread[included builds,5,main]) completed. Took 0.006 secs. build 05-Jan-2026 21:52:42 :eclipse (Thread[included builds,5,main]) started. build 05-Jan-2026 21:52:42 build 05-Jan-2026 21:52:42 > Task :eclipse build 05-Jan-2026 21:52:42 Skipping task ':eclipse' as it has no actions. build 05-Jan-2026 21:52:42 :eclipse (Thread[included builds,5,main]) completed. Took 0.0 secs. build 05-Jan-2026 21:52:42 :jalviewjsCreateJ2sSettings (Thread[included builds,5,main]) started. build 05-Jan-2026 21:52:42 build 05-Jan-2026 21:52:42 > Task :jalviewjsCreateJ2sSettings build 05-Jan-2026 21:52:42 Caching disabled for task ':jalviewjsCreateJ2sSettings' because: build 05-Jan-2026 21:52:42 Build cache is disabled build 05-Jan-2026 21:52:42 Task ':jalviewjsCreateJ2sSettings' is not up-to-date because: build 05-Jan-2026 21:52:42 No history is available. build 05-Jan-2026 21:52:42 :jalviewjsCreateJ2sSettings (Thread[included builds,5,main]) completed. Took 0.007 secs. build 05-Jan-2026 21:52:42 :jalviewjsEclipseCopyDropins (Thread[included builds,5,main]) started. build 05-Jan-2026 21:52:42 build 05-Jan-2026 21:52:42 > Task :jalviewjsEclipseCopyDropins build 05-Jan-2026 21:52:42 Caching disabled for task ':jalviewjsEclipseCopyDropins' because: build 05-Jan-2026 21:52:42 Build cache is disabled build 05-Jan-2026 21:52:42 Task ':jalviewjsEclipseCopyDropins' is not up-to-date because: build 05-Jan-2026 21:52:42 No history is available. build 05-Jan-2026 21:52:42 :jalviewjsEclipseCopyDropins (Thread[included builds,5,main]) completed. Took 0.016 secs. build 05-Jan-2026 21:52:42 :jalviewjsSetEclipseWorkspace (Thread[included builds,5,main]) started. build 05-Jan-2026 21:52:42 build 05-Jan-2026 21:52:42 > Task :jalviewjsSetEclipseWorkspace build 05-Jan-2026 21:52:42 Caching disabled for task ':jalviewjsSetEclipseWorkspace' because: build 05-Jan-2026 21:52:42 Build cache is disabled build 05-Jan-2026 21:52:42 Task ':jalviewjsSetEclipseWorkspace' is not up-to-date because: build 05-Jan-2026 21:52:42 Task.upToDateWhen is false. build 05-Jan-2026 21:52:42 Running task jalviewjsSetEclipseWorkspace as IN_ECLIPSE=false build 05-Jan-2026 21:52:42 NEW ECLIPSE WORKSPACE: /tmp/groovy-generated-tmpdir-6210038596589711122 build 05-Jan-2026 21:52:42 :jalviewjsSetEclipseWorkspace (Thread[included builds,5,main]) completed. Took 0.007 secs. build 05-Jan-2026 21:52:42 :jalviewjsEclipseSetup (Thread[included builds,5,main]) started. build 05-Jan-2026 21:52:42 build 05-Jan-2026 21:52:42 > Task :jalviewjsEclipseSetup build 05-Jan-2026 21:52:42 Skipping task ':jalviewjsEclipseSetup' as it has no actions. build 05-Jan-2026 21:52:42 :jalviewjsEclipseSetup (Thread[included builds,5,main]) completed. Took 0.0 secs. build 05-Jan-2026 21:52:42 :jalviewjsEnableAltFileProperty (Thread[included builds,5,main]) started. build 05-Jan-2026 21:52:42 build 05-Jan-2026 21:52:42 > Task :jalviewjsEnableAltFileProperty build 05-Jan-2026 21:52:42 Caching disabled for task ':jalviewjsEnableAltFileProperty' because: build 05-Jan-2026 21:52:42 Build cache is disabled build 05-Jan-2026 21:52:42 Task ':jalviewjsEnableAltFileProperty' is not up-to-date because: build 05-Jan-2026 21:52:42 No history is available. build 05-Jan-2026 21:52:42 :jalviewjsEnableAltFileProperty (Thread[included builds,5,main]) completed. Took 0.001 secs. build 05-Jan-2026 21:52:42 :eclipseSetup (Thread[included builds,5,main]) started. build 05-Jan-2026 21:52:42 build 05-Jan-2026 21:52:42 > Task :eclipseSetup build 05-Jan-2026 21:52:42 Skipping task ':eclipseSetup' as it has no actions. build 05-Jan-2026 21:52:42 :eclipseSetup (Thread[included builds,5,main]) completed. Took 0.0 secs. build 05-Jan-2026 21:52:42 :jalviewjsProjectImport (Thread[included builds,5,main]) started. build 05-Jan-2026 21:52:44 build 05-Jan-2026 21:52:44 > Task :jalviewjsProjectImport build 05-Jan-2026 21:52:44 Caching disabled for task ':jalviewjsProjectImport' because: build 05-Jan-2026 21:52:44 Build cache is disabled build 05-Jan-2026 21:52:44 Task ':jalviewjsProjectImport' is not up-to-date because: build 05-Jan-2026 21:52:44 Task.upToDateWhen is false. build 05-Jan-2026 21:52:44 Running task jalviewjsProjectImport as IN_ECLIPSE=false build 05-Jan-2026 21:52:44 Starting process 'command '/home/bamboo/buildtools/eclipse/latest/eclipse/eclipse''. Working directory: /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1 Command: /home/bamboo/buildtools/eclipse/latest/eclipse/eclipse -nosplash --launcher.suppressErrors -application com.seeq.eclipse.importprojects.headlessimport -data /tmp/groovy-generated-tmpdir-6210038596589711122 -import /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1 --launcher.appendVmargs -vmargs -Dorg.eclipse.equinox.p2.reconciler.dropins.directory=/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/eclipse_dropins -Dnet.sf.j2s.core.headlessbuild=true -Dorg.jalview.jalviewjsj2sfilename=./build/jalviewjs/config/j2s build 05-Jan-2026 21:52:44 Successfully started process 'command '/home/bamboo/buildtools/eclipse/latest/eclipse/eclipse'' error 05-Jan-2026 21:52:44 SLF4J: No SLF4J providers were found. error 05-Jan-2026 21:52:44 SLF4J: Defaulting to no-operation (NOP) logger implementation error 05-Jan-2026 21:52:44 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details. build 05-Jan-2026 21:52:53 :jalviewjsProjectImport (Thread[included builds,5,main]) completed. Took 10.606 secs. build 05-Jan-2026 21:52:53 :jalviewjsTranspile (Thread[included builds,5,main]) started. build 05-Jan-2026 21:52:55 build 05-Jan-2026 21:52:55 > Task :jalviewjsTranspile build 05-Jan-2026 21:52:55 Caching disabled for task ':jalviewjsTranspile' because: build 05-Jan-2026 21:52:55 Build cache is disabled build 05-Jan-2026 21:52:55 Task ':jalviewjsTranspile' is not up-to-date because: build 05-Jan-2026 21:52:55 Task.upToDateWhen is false. build 05-Jan-2026 21:52:55 Running task jalviewjsTranspile as IN_ECLIPSE=false build 05-Jan-2026 21:52:55 Starting process 'command '/home/bamboo/buildtools/eclipse/latest/eclipse/eclipse''. Working directory: /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1 Command: /home/bamboo/buildtools/eclipse/latest/eclipse/eclipse -nosplash --launcher.suppressErrors -application org.eclipse.jdt.apt.core.aptBuild -data /tmp/groovy-generated-tmpdir-6210038596589711122 -cleanBuild jalview --launcher.appendVmargs -vmargs -Dorg.eclipse.equinox.p2.reconciler.dropins.directory=/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/eclipse_dropins -Dnet.sf.j2s.core.headlessbuild=true -Dorg.jalview.jalviewjsj2sfilename=./build/jalviewjs/config/j2s build 05-Jan-2026 21:52:55 Successfully started process 'command '/home/bamboo/buildtools/eclipse/latest/eclipse/eclipse'' error 05-Jan-2026 21:52:55 SLF4J: No SLF4J providers were found. error 05-Jan-2026 21:52:55 SLF4J: Defaulting to no-operation (NOP) logger implementation error 05-Jan-2026 21:52:55 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details. build 05-Jan-2026 21:52:55 Invoking 'Java Builder' on '/jalview'. build 05-Jan-2026 21:52:55 net.sf.j2s.core.3.3.1/3.3.1-v1 started build 05-Jan-2026 21:52:55 J2S CompilationParticipant started build 05-Jan-2026 21:52:55 J2S isActive true /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1 build 05-Jan-2026 21:52:55 J2S aboutToBuild jalview /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1 build 05-Jan-2026 21:53:26 J2S cleanStarting /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1 build 05-Jan-2026 21:53:26 Cleaning output folder for jalview build 05-Jan-2026 21:53:26 Build done build 05-Jan-2026 21:53:26 Invoking 'Gradle Project Builder' on '/jalview'. build 05-Jan-2026 21:53:26 Invoking 'Java Builder' on '/jalview'. build 05-Jan-2026 21:53:26 J2S aboutToBuild jalview /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1 build 05-Jan-2026 21:53:26 Preparing to build jalview build 05-Jan-2026 21:53:26 Cleaning output folder for jalview build 05-Jan-2026 21:53:26 J2S cleanStarting /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1 build 05-Jan-2026 21:53:26 Copying resources to the output folder build 05-Jan-2026 21:53:26 Analyzing sources build 05-Jan-2026 21:53:26 J2S buildStarting 1253 files, contexts.size() = 1, isBatch=true build 05-Jan-2026 21:53:26 Compiling jalview/src/com/github/reinert/jjschema build 05-Jan-2026 21:53:28 Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:28 (Found 1 warning) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:28 (Found 2 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:28 (Found 3 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:28 (Found 4 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:28 (Found 5 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:28 (Found 9 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 12 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 13 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 14 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 15 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 37 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 38 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 46 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 47 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 48 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 49 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 50 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 51 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 52 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 59 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 63 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 67 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 69 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 89 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 90 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 91 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 98 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 108 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 113 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 114 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 115 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 119 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 120 warnings) Compiling jalview/src/com/stevesoft/pat build 05-Jan-2026 21:53:29 (Found 120 warnings) Compiling jalview/src/com/stevesoft/pat/wrap build 05-Jan-2026 21:53:29 (Found 124 warnings) Compiling jalview/src/darrylbu/util build 05-Jan-2026 21:53:29 (Found 124 warnings) Compiling jalview/src/ext/edu/ucsf/rbvi/strucviz2 build 05-Jan-2026 21:53:29 (Found 126 warnings) Compiling jalview/src/ext/edu/ucsf/rbvi/strucviz2 build 05-Jan-2026 21:53:29 (Found 135 warnings) Compiling jalview/src/ext/edu/ucsf/rbvi/strucviz2 build 05-Jan-2026 21:53:29 (Found 138 warnings) Compiling jalview/src/ext/edu/ucsf/rbvi/strucviz2/port build 05-Jan-2026 21:53:29 (Found 138 warnings) Compiling jalview/src/ext/vamsas build 05-Jan-2026 21:53:29 (Found 145 warnings) Compiling jalview/src/ext/vamsas build 05-Jan-2026 21:53:29 (Found 152 warnings) Compiling jalview/src/ext/vamsas build 05-Jan-2026 21:53:29 (Found 190 warnings) Compiling jalview/src/ext/vamsas build 05-Jan-2026 21:53:29 (Found 197 warnings) Compiling jalview/src/ext/vamsas build 05-Jan-2026 21:53:29 (Found 253 warnings) Compiling jalview/src/ext/vamsas build 05-Jan-2026 21:53:29 (Found 285 warnings) Compiling jalview/src/ext/vamsas build 05-Jan-2026 21:53:29 (Found 292 warnings) Compiling jalview/src/ext/vamsas build 05-Jan-2026 21:53:29 (Found 360 warnings) Compiling jalview/src/ext/vamsas build 05-Jan-2026 21:53:29 (Found 363 warnings) Compiling jalview/src/ext/vamsas build 05-Jan-2026 21:53:29 (Found 366 warnings) Compiling jalview/src/ext/vamsas build 05-Jan-2026 21:53:30 (Found 367 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 372 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 375 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 383 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 388 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 423 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 432 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 433 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 434 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 435 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 436 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 437 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 438 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 439 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 446 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 455 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 459 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 463 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 466 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 501 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 567 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 568 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 574 warnings) Compiling jalview/src/jalview/analysis build 05-Jan-2026 21:53:30 (Found 574 warnings) Compiling jalview/src/jalview/analysis/scoremodels build 05-Jan-2026 21:53:30 (Found 584 warnings) Compiling jalview/src/jalview/analytics build 05-Jan-2026 21:53:30 (Found 584 warnings) Compiling jalview/src/jalview/api build 05-Jan-2026 21:53:30 (Found 585 warnings) Compiling jalview/src/jalview/api build 05-Jan-2026 21:53:30 (Found 587 warnings) Compiling jalview/src/jalview/api build 05-Jan-2026 21:53:30 (Found 587 warnings) Compiling jalview/src/jalview/api/analysis build 05-Jan-2026 21:53:30 (Found 588 warnings) Compiling jalview/src/jalview/api/structures build 05-Jan-2026 21:53:30 (Found 591 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 651 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 660 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 661 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 666 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 667 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 679 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 690 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 692 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 697 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 698 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 699 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 700 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 703 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 705 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 706 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 708 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 709 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 715 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 716 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 717 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 719 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 723 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 725 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 733 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 743 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 746 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 747 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 748 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 751 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 752 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 756 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 759 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 762 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 800 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 802 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 803 warnings) Compiling jalview/src/jalview/appletgui build 05-Jan-2026 21:53:31 (Found 1 error + 812 warnings) Compiling jalview/src/jalview/appletgui/js build 05-Jan-2026 21:53:31 (Found 1 error + 817 warnings) Compiling jalview/src/jalview/appletgui/js build 05-Jan-2026 21:53:31 (Found 1 error + 817 warnings) Compiling jalview/src/jalview/bin build 05-Jan-2026 21:53:31 (Found 1 error + 821 warnings) Compiling jalview/src/jalview/bin build 05-Jan-2026 21:53:31 (Found 1 error + 823 warnings) Compiling jalview/src/jalview/bin build 05-Jan-2026 21:53:31 (Found 1 error + 824 warnings) Compiling jalview/src/jalview/bin build 05-Jan-2026 21:53:32 (Found 1 error + 832 warnings) Compiling jalview/src/jalview/bin build 05-Jan-2026 21:53:32 (Found 1 error + 834 warnings) Compiling jalview/src/jalview/bin build 05-Jan-2026 21:53:32 (Found 1 error + 836 warnings) Compiling jalview/src/jalview/bin build 05-Jan-2026 21:53:32 (Found 4 errors + 894 warnings) Compiling jalview/src/jalview/bin build 05-Jan-2026 21:53:32 (Found 4 errors + 899 warnings) Compiling jalview/src/jalview/bin build 05-Jan-2026 21:53:32 (Found 4 errors + 901 warnings) Compiling jalview/src/jalview/bin build 05-Jan-2026 21:53:32 (Found 4 errors + 901 warnings) Compiling jalview/src/jalview/bin/argparser build 05-Jan-2026 21:53:32 (Found 4 errors + 902 warnings) Compiling jalview/src/jalview/bin/argparser build 05-Jan-2026 21:53:32 (Found 4 errors + 904 warnings) Compiling jalview/src/jalview/bin/argparser build 05-Jan-2026 21:53:32 (Found 4 errors + 905 warnings) Compiling jalview/src/jalview/bin/argparser build 05-Jan-2026 21:53:32 (Found 4 errors + 905 warnings) Compiling jalview/src/jalview/bin/groovy build 05-Jan-2026 21:53:32 (Found 4 errors + 905 warnings) Compiling jalview/src/jalview/commands build 05-Jan-2026 21:53:32 (Found 4 errors + 905 warnings) Compiling jalview/src/jalview/controller build 05-Jan-2026 21:53:32 (Found 4 errors + 905 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 918 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 919 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 920 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 923 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 924 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 925 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 931 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 935 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 937 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 938 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 939 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 940 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 945 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 946 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 954 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 955 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 956 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 959 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 964 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 968 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:32 (Found 4 errors + 972 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:33 (Found 4 errors + 974 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:33 (Found 4 errors + 975 warnings) Compiling jalview/src/jalview/datamodel build 05-Jan-2026 21:53:33 (Found 4 errors + 976 warnings) Compiling jalview/src/jalview/datamodel/annotations build 05-Jan-2026 21:53:33 (Found 4 errors + 976 warnings) Compiling jalview/src/jalview/datamodel/features build 05-Jan-2026 21:53:33 (Found 4 errors + 976 warnings) Compiling jalview/src/jalview/exceptions build 05-Jan-2026 21:53:33 (Found 4 errors + 976 warnings) Compiling jalview/src/jalview/ext/android build 05-Jan-2026 21:53:33 (Found 4 errors + 976 warnings) Compiling jalview/src/jalview/ext/ensembl build 05-Jan-2026 21:53:33 (Found 4 errors + 978 warnings) Compiling jalview/src/jalview/ext/ensembl build 05-Jan-2026 21:53:33 (Found 4 errors + 979 warnings) Compiling jalview/src/jalview/ext/ensembl build 05-Jan-2026 21:53:33 (Found 4 errors + 982 warnings) Compiling jalview/src/jalview/ext/htsjdk build 05-Jan-2026 21:53:33 (Found 4 errors + 983 warnings) Compiling jalview/src/jalview/ext/htsjdk build 05-Jan-2026 21:53:33 (Found 4 errors + 989 warnings) Compiling jalview/src/jalview/ext/jmol build 05-Jan-2026 21:53:33 (Found 4 errors + 993 warnings) Compiling jalview/src/jalview/ext/paradise build 05-Jan-2026 21:53:33 (Found 4 errors + 993 warnings) Compiling jalview/src/jalview/ext/pymol build 05-Jan-2026 21:53:33 (Found 4 errors + 995 warnings) Compiling jalview/src/jalview/ext/pymol build 05-Jan-2026 21:53:33 (Found 4 errors + 995 warnings) Compiling jalview/src/jalview/ext/rbvi/chimera build 05-Jan-2026 21:53:33 (Found 4 errors + 996 warnings) Compiling jalview/src/jalview/ext/rbvi/chimera build 05-Jan-2026 21:53:33 (Found 4 errors + 997 warnings) Compiling jalview/src/jalview/ext/rbvi/chimera build 05-Jan-2026 21:53:33 (Found 4 errors + 997 warnings) Compiling jalview/src/jalview/ext/so build 05-Jan-2026 21:53:33 (Found 4 errors + 997 warnings) Compiling jalview/src/jalview/ext/varna build 05-Jan-2026 21:53:33 (Found 4 errors + 997 warnings) Compiling jalview/src/jalview/fts/api build 05-Jan-2026 21:53:33 (Found 4 errors + 998 warnings) Compiling jalview/src/jalview/fts/api build 05-Jan-2026 21:53:33 (Found 4 errors + 999 warnings) Compiling jalview/src/jalview/fts/core build 05-Jan-2026 21:53:33 (Found 4 errors + 1002 warnings) Compiling jalview/src/jalview/fts/core build 05-Jan-2026 21:53:33 (Found 4 errors + 1003 warnings) Compiling jalview/src/jalview/fts/core build 05-Jan-2026 21:53:33 (Found 4 errors + 1004 warnings) Compiling jalview/src/jalview/fts/core build 05-Jan-2026 21:53:33 (Found 4 errors + 1004 warnings) Compiling jalview/src/jalview/fts/service/alphafold build 05-Jan-2026 21:53:33 (Found 4 errors + 1004 warnings) Compiling jalview/src/jalview/fts/service/pdb build 05-Jan-2026 21:53:33 (Found 4 errors + 1012 warnings) Compiling jalview/src/jalview/fts/service/pdb build 05-Jan-2026 21:53:33 (Found 4 errors + 1012 warnings) Compiling jalview/src/jalview/fts/service/threedbeacons build 05-Jan-2026 21:53:33 (Found 4 errors + 1014 warnings) Compiling jalview/src/jalview/fts/service/threedbeacons build 05-Jan-2026 21:53:33 (Found 4 errors + 1018 warnings) Compiling jalview/src/jalview/fts/service/threedbeacons build 05-Jan-2026 21:53:33 (Found 4 errors + 1023 warnings) Compiling jalview/src/jalview/fts/service/uniprot build 05-Jan-2026 21:53:33 (Found 4 errors + 1023 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:33 (Found 4 errors + 1030 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:33 (Found 4 errors + 1046 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:33 (Found 4 errors + 1048 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:33 (Found 4 errors + 1049 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:33 (Found 4 errors + 1050 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:33 (Found 4 errors + 1051 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:33 (Found 4 errors + 1071 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:33 (Found 4 errors + 1078 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:33 (Found 4 errors + 1081 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:33 (Found 4 errors + 1082 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:33 (Found 4 errors + 1083 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:33 (Found 4 errors + 1092 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1122 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1124 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1125 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1126 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1131 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1134 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1135 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1142 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1143 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1147 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1152 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1153 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1155 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1156 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1157 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1159 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1160 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1166 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1167 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1168 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1169 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1170 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1172 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1173 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1175 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1177 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1182 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1185 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1193 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1196 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1198 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1199 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1200 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1203 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1207 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1215 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1224 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1228 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1229 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1231 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1233 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1234 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1237 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1238 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1246 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1250 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1252 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1253 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1313 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1323 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1324 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1353 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1356 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:34 (Found 4 errors + 1363 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:35 (Found 4 errors + 1369 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:35 (Found 4 errors + 1383 warnings) Compiling jalview/src/jalview/gui build 05-Jan-2026 21:53:35 (Found 4 errors + 1385 warnings) Compiling jalview/src/jalview/gui/structurechooser build 05-Jan-2026 21:53:35 (Found 4 errors + 1387 warnings) Compiling jalview/src/jalview/gui/structurechooser build 05-Jan-2026 21:53:35 (Found 4 errors + 1392 warnings) Compiling jalview/src/jalview/gui/structurechooser build 05-Jan-2026 21:53:35 (Found 4 errors + 1394 warnings) Compiling jalview/src/jalview/hmmer build 05-Jan-2026 21:53:35 (Found 4 errors + 1397 warnings) Compiling jalview/src/jalview/hmmer build 05-Jan-2026 21:53:35 (Found 4 errors + 1404 warnings) Compiling jalview/src/jalview/hmmer build 05-Jan-2026 21:53:35 (Found 4 errors + 1405 warnings) Compiling jalview/src/jalview/hmmer build 05-Jan-2026 21:53:35 (Found 4 errors + 1407 warnings) Compiling jalview/src/jalview/hmmer build 05-Jan-2026 21:53:35 (Found 4 errors + 1409 warnings) Compiling jalview/src/jalview/hmmer build 05-Jan-2026 21:53:35 (Found 4 errors + 1413 warnings) Compiling jalview/src/jalview/hmmer build 05-Jan-2026 21:53:35 (Found 4 errors + 1413 warnings) Compiling jalview/src/jalview/httpserver build 05-Jan-2026 21:53:35 (Found 4 errors + 1413 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1418 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1420 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1441 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1443 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1445 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1446 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1450 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1453 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1454 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1455 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1458 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1459 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1460 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1498 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1501 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1503 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1523 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1554 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1556 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1558 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1559 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1560 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1573 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1633 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1634 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1635 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1728 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1733 warnings) Compiling jalview/src/jalview/io build 05-Jan-2026 21:53:35 (Found 4 errors + 1733 warnings) Compiling jalview/src/jalview/io/cache build 05-Jan-2026 21:53:35 (Found 4 errors + 1734 warnings) Compiling jalview/src/jalview/io/exceptions build 05-Jan-2026 21:53:35 (Found 4 errors + 1734 warnings) Compiling jalview/src/jalview/io/gff build 05-Jan-2026 21:53:35 (Found 4 errors + 1735 warnings) Compiling jalview/src/jalview/io/gff build 05-Jan-2026 21:53:35 (Found 4 errors + 1735 warnings) Compiling jalview/src/jalview/io/packed build 05-Jan-2026 21:53:35 (Found 4 errors + 1739 warnings) Compiling jalview/src/jalview/io/packed build 05-Jan-2026 21:53:35 (Found 4 errors + 1740 warnings) Compiling jalview/src/jalview/io/packed build 05-Jan-2026 21:53:35 (Found 4 errors + 1740 warnings) Compiling jalview/src/jalview/io/vamsas build 05-Jan-2026 21:53:35 (Found 4 errors + 1758 warnings) Compiling jalview/src/jalview/io/vamsas build 05-Jan-2026 21:53:35 (Found 4 errors + 1769 warnings) Compiling jalview/src/jalview/io/vamsas build 05-Jan-2026 21:53:35 (Found 4 errors + 1770 warnings) Compiling jalview/src/jalview/io/vamsas build 05-Jan-2026 21:53:35 (Found 4 errors + 1783 warnings) Compiling jalview/src/jalview/io/vamsas build 05-Jan-2026 21:53:35 (Found 4 errors + 1787 warnings) Compiling jalview/src/jalview/io/vamsas build 05-Jan-2026 21:53:35 (Found 4 errors + 1791 warnings) Compiling jalview/src/jalview/io/vamsas build 05-Jan-2026 21:53:35 (Found 4 errors + 1816 warnings) Compiling jalview/src/jalview/io/vamsas build 05-Jan-2026 21:53:35 (Found 4 errors + 1819 warnings) Compiling jalview/src/jalview/io/vcf build 05-Jan-2026 21:53:35 (Found 4 errors + 1820 warnings) Compiling jalview/src/jalview/javascript/json build 05-Jan-2026 21:53:35 (Found 4 errors + 1820 warnings) Compiling jalview/src/jalview/javascript/web build 05-Jan-2026 21:53:35 (Found 4 errors + 1821 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1822 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1823 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1824 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1825 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1828 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1829 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1830 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1831 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1832 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1835 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1837 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1845 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1846 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1847 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1852 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1854 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1855 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1856 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1859 warnings) Compiling jalview/src/jalview/jbgui build 05-Jan-2026 21:53:35 (Found 4 errors + 1859 warnings) Compiling jalview/src/jalview/json/binding/biojs build 05-Jan-2026 21:53:35 (Found 4 errors + 1859 warnings) Compiling jalview/src/jalview/json/binding/biojson/v1 build 05-Jan-2026 21:53:35 (Found 4 errors + 1862 warnings) Compiling jalview/src/jalview/log build 05-Jan-2026 21:53:35 (Found 4 errors + 1864 warnings) Compiling jalview/src/jalview/log build 05-Jan-2026 21:53:35 (Found 4 errors + 1865 warnings) Compiling jalview/src/jalview/log build 05-Jan-2026 21:53:35 (Found 4 errors + 1865 warnings) Compiling jalview/src/jalview/math build 05-Jan-2026 21:53:35 (Found 4 errors + 1866 warnings) Compiling jalview/src/jalview/math build 05-Jan-2026 21:53:35 (Found 4 errors + 1867 warnings) Compiling jalview/src/jalview/math build 05-Jan-2026 21:53:35 (Found 4 errors + 1900 warnings) Compiling jalview/src/jalview/project build 05-Jan-2026 21:53:35 (Found 4 errors + 1902 warnings) Compiling jalview/src/jalview/renderer build 05-Jan-2026 21:53:35 (Found 4 errors + 1903 warnings) Compiling jalview/src/jalview/renderer build 05-Jan-2026 21:53:35 (Found 4 errors + 1903 warnings) Compiling jalview/src/jalview/renderer/api build 05-Jan-2026 21:53:35 (Found 4 errors + 1903 warnings) Compiling jalview/src/jalview/renderer/seqfeatures build 05-Jan-2026 21:53:35 (Found 4 errors + 1903 warnings) Compiling jalview/src/jalview/rest build 05-Jan-2026 21:53:35 (Found 4 errors + 1903 warnings) Compiling jalview/src/jalview/schemes build 05-Jan-2026 21:53:35 (Found 4 errors + 1906 warnings) Compiling jalview/src/jalview/schemes build 05-Jan-2026 21:53:35 (Found 4 errors + 1908 warnings) Compiling jalview/src/jalview/schemes build 05-Jan-2026 21:53:36 (Found 4 errors + 1908 warnings) Compiling jalview/src/jalview/structure build 05-Jan-2026 21:53:36 (Found 4 errors + 1909 warnings) Compiling jalview/src/jalview/structure build 05-Jan-2026 21:53:36 (Found 4 errors + 1910 warnings) Compiling jalview/src/jalview/structure build 05-Jan-2026 21:53:36 (Found 4 errors + 1916 warnings) Compiling jalview/src/jalview/structure build 05-Jan-2026 21:53:36 (Found 4 errors + 1918 warnings) Compiling jalview/src/jalview/structure build 05-Jan-2026 21:53:36 (Found 4 errors + 1919 warnings) Compiling jalview/src/jalview/structures/models build 05-Jan-2026 21:53:36 (Found 4 errors + 1919 warnings) Compiling jalview/src/jalview/urls build 05-Jan-2026 21:53:36 (Found 4 errors + 1920 warnings) Compiling jalview/src/jalview/urls build 05-Jan-2026 21:53:36 (Found 4 errors + 1920 warnings) Compiling jalview/src/jalview/urls/api build 05-Jan-2026 21:53:36 (Found 4 errors + 1920 warnings) Compiling jalview/src/jalview/urls/applet build 05-Jan-2026 21:53:36 (Found 4 errors + 1920 warnings) Compiling jalview/src/jalview/urls/desktop build 05-Jan-2026 21:53:36 (Found 4 errors + 1920 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 1921 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 1922 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 1927 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 1933 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 1934 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 1946 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 1951 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 1953 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 1956 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 1961 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 1964 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 1965 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 1967 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 1969 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 1973 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 1977 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 2001 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 2002 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 2002 warnings) Compiling jalview/src/jalview/util/dialogrunner build 05-Jan-2026 21:53:36 (Found 4 errors + 2002 warnings) Compiling jalview/src/jalview/util/imagemaker build 05-Jan-2026 21:53:36 (Found 4 errors + 2002 warnings) Compiling jalview/src/jalview/util build 05-Jan-2026 21:53:36 (Found 4 errors + 2002 warnings) Compiling jalview/src/jalview/util/matcher build 05-Jan-2026 21:53:36 (Found 4 errors + 2014 warnings) Compiling jalview/src/jalview/viewmodel build 05-Jan-2026 21:53:36 (Found 4 errors + 2021 warnings) Compiling jalview/src/jalview/viewmodel build 05-Jan-2026 21:53:36 (Found 4 errors + 2021 warnings) Compiling jalview/src/jalview/viewmodel/annotationfilter build 05-Jan-2026 21:53:36 (Found 4 errors + 2022 warnings) Compiling jalview/src/jalview/viewmodel/seqfeatures build 05-Jan-2026 21:53:36 (Found 4 errors + 2022 warnings) Compiling jalview/src/jalview/viewmodel/styles build 05-Jan-2026 21:53:36 (Found 4 errors + 2028 warnings) Compiling jalview/src/jalview/workers build 05-Jan-2026 21:53:36 (Found 4 errors + 2030 warnings) Compiling jalview/src/jalview/workers build 05-Jan-2026 21:53:36 (Found 4 errors + 2034 warnings) Compiling jalview/src/jalview/workers build 05-Jan-2026 21:53:36 (Found 4 errors + 2034 warnings) Compiling jalview/src/jalview/ws build 05-Jan-2026 21:53:36 (Found 4 errors + 2037 warnings) Compiling jalview/src/jalview/ws build 05-Jan-2026 21:53:36 (Found 4 errors + 2089 warnings) Compiling jalview/src/jalview/ws build 05-Jan-2026 21:53:36 (Found 4 errors + 2091 warnings) Compiling jalview/src/jalview/ws build 05-Jan-2026 21:53:36 (Found 4 errors + 2096 warnings) Compiling jalview/src/jalview/ws build 05-Jan-2026 21:53:36 (Found 4 errors + 2096 warnings) Compiling jalview/src/jalview/ws/api build 05-Jan-2026 21:53:36 (Found 4 errors + 2097 warnings) Compiling jalview/src/jalview/ws/api build 05-Jan-2026 21:53:36 (Found 4 errors + 2097 warnings) Compiling jalview/src/jalview/ws/datamodel build 05-Jan-2026 21:53:36 (Found 4 errors + 2100 warnings) Compiling jalview/src/jalview/ws/datamodel/alphafold build 05-Jan-2026 21:53:36 (Found 4 errors + 2105 warnings) Compiling jalview/src/jalview/ws/datamodel/alphafold build 05-Jan-2026 21:53:36 (Found 4 errors + 2108 warnings) Compiling jalview/src/jalview/ws/dbsources build 05-Jan-2026 21:53:36 (Found 4 errors + 2109 warnings) Compiling jalview/src/jalview/ws/dbsources build 05-Jan-2026 21:53:36 (Found 4 errors + 2112 warnings) Compiling jalview/src/jalview/ws/dbsources build 05-Jan-2026 21:53:36 (Found 4 errors + 2113 warnings) Compiling jalview/src/jalview/ws/dbsources build 05-Jan-2026 21:53:36 (Found 4 errors + 2113 warnings) Compiling jalview/src/jalview/ws/ebi build 05-Jan-2026 21:53:36 (Found 4 errors + 2126 warnings) Compiling jalview/src/jalview/ws/ebi build 05-Jan-2026 21:53:36 (Found 4 errors + 2136 warnings) Compiling jalview/src/jalview/ws/ebi build 05-Jan-2026 21:53:36 (Found 4 errors + 2136 warnings) Compiling jalview/src/jalview/ws/gui build 05-Jan-2026 21:53:36 (Found 4 errors + 2140 warnings) Compiling jalview/src/jalview/ws/gui build 05-Jan-2026 21:53:36 (Found 4 errors + 2143 warnings) Compiling jalview/src/jalview/ws/gui build 05-Jan-2026 21:53:36 (Found 4 errors + 2143 warnings) Compiling jalview/src/jalview/ws/io/mime build 05-Jan-2026 21:53:36 (Found 4 errors + 2143 warnings) Compiling jalview/src/jalview/ws/jws1 build 05-Jan-2026 21:53:36 (Found 4 errors + 2144 warnings) Compiling jalview/src/jalview/ws/jws1 build 05-Jan-2026 21:53:36 (Found 4 errors + 2145 warnings) Compiling jalview/src/jalview/ws/jws1 build 05-Jan-2026 21:53:36 (Found 4 errors + 2152 warnings) Compiling jalview/src/jalview/ws/jws1 build 05-Jan-2026 21:53:36 (Found 4 errors + 2162 warnings) Compiling jalview/src/jalview/ws/jws1 build 05-Jan-2026 21:53:36 (Found 4 errors + 2176 warnings) Compiling jalview/src/jalview/ws/jws1 build 05-Jan-2026 21:53:36 (Found 4 errors + 2179 warnings) Compiling jalview/src/jalview/ws/jws1 build 05-Jan-2026 21:53:36 (Found 4 errors + 2179 warnings) Compiling jalview/src/jalview/ws/jws2 build 05-Jan-2026 21:53:36 (Found 4 errors + 2186 warnings) Compiling jalview/src/jalview/ws/jws2 build 05-Jan-2026 21:53:36 (Found 4 errors + 2200 warnings) Compiling jalview/src/jalview/ws/jws2 build 05-Jan-2026 21:53:36 (Found 4 errors + 2204 warnings) Compiling jalview/src/jalview/ws/jws2 build 05-Jan-2026 21:53:36 (Found 4 errors + 2226 warnings) Compiling jalview/src/jalview/ws/jws2 build 05-Jan-2026 21:53:36 (Found 4 errors + 2230 warnings) Compiling jalview/src/jalview/ws/jws2 build 05-Jan-2026 21:53:36 (Found 4 errors + 2234 warnings) Compiling jalview/src/jalview/ws/jws2 build 05-Jan-2026 21:53:36 (Found 4 errors + 2250 warnings) Compiling jalview/src/jalview/ws/jws2 build 05-Jan-2026 21:53:36 (Found 4 errors + 2251 warnings) Compiling jalview/src/jalview/ws/jws2 build 05-Jan-2026 21:53:36 (Found 4 errors + 2273 warnings) Compiling jalview/src/jalview/ws/jws2 build 05-Jan-2026 21:53:36 (Found 4 errors + 2279 warnings) Compiling jalview/src/jalview/ws/jws2 build 05-Jan-2026 21:53:36 (Found 4 errors + 2282 warnings) Compiling jalview/src/jalview/ws/jws2 build 05-Jan-2026 21:53:36 (Found 4 errors + 2285 warnings) Compiling jalview/src/jalview/ws/jws2/dm build 05-Jan-2026 21:53:36 (Found 4 errors + 2289 warnings) Compiling jalview/src/jalview/ws/jws2/dm build 05-Jan-2026 21:53:36 (Found 4 errors + 2292 warnings) Compiling jalview/src/jalview/ws/jws2/dm build 05-Jan-2026 21:53:36 (Found 4 errors + 2303 warnings) Compiling jalview/src/jalview/ws/jws2/dm build 05-Jan-2026 21:53:36 (Found 4 errors + 2303 warnings) Compiling jalview/src/jalview/ws/jws2/jabaws2 build 05-Jan-2026 21:53:36 (Found 4 errors + 2306 warnings) Compiling jalview/src/jalview/ws/jws2/jabaws2 build 05-Jan-2026 21:53:36 (Found 4 errors + 2313 warnings) Compiling jalview/src/jalview/ws/jws2/jabaws2 build 05-Jan-2026 21:53:36 (Found 4 errors + 2318 warnings) Compiling jalview/src/jalview/ws/jws2/jabaws2 build 05-Jan-2026 21:53:36 (Found 4 errors + 2324 warnings) Compiling jalview/src/jalview/ws/jws2/jabaws2 build 05-Jan-2026 21:53:36 (Found 4 errors + 2332 warnings) Compiling jalview/src/jalview/ws/jws2/jabaws2 build 05-Jan-2026 21:53:36 (Found 4 errors + 2332 warnings) Compiling jalview/src/jalview/ws/params build 05-Jan-2026 21:53:36 (Found 4 errors + 2333 warnings) Compiling jalview/src/jalview/ws/params build 05-Jan-2026 21:53:36 (Found 4 errors + 2333 warnings) Compiling jalview/src/jalview/ws/params/simple build 05-Jan-2026 21:53:36 (Found 4 errors + 2333 warnings) Compiling jalview/src/jalview/ws/rest build 05-Jan-2026 21:53:36 (Found 4 errors + 2337 warnings) Compiling jalview/src/jalview/ws/rest build 05-Jan-2026 21:53:36 (Found 4 errors + 2343 warnings) Compiling jalview/src/jalview/ws/rest build 05-Jan-2026 21:53:36 (Found 4 errors + 2344 warnings) Compiling jalview/src/jalview/ws/rest build 05-Jan-2026 21:53:36 (Found 4 errors + 2349 warnings) Compiling jalview/src/jalview/ws/rest build 05-Jan-2026 21:53:36 (Found 4 errors + 2366 warnings) Compiling jalview/src/jalview/ws/rest build 05-Jan-2026 21:53:36 (Found 4 errors + 2372 warnings) Compiling jalview/src/jalview/ws/rest build 05-Jan-2026 21:53:36 (Found 4 errors + 2373 warnings) Compiling jalview/src/jalview/ws/rest/clientdefs build 05-Jan-2026 21:53:36 (Found 4 errors + 2375 warnings) Compiling jalview/src/jalview/ws/rest/params build 05-Jan-2026 21:53:36 (Found 4 errors + 2377 warnings) Compiling jalview/src/jalview/ws/rest/params build 05-Jan-2026 21:53:36 (Found 4 errors + 2378 warnings) Compiling jalview/src/jalview/ws/rest/params build 05-Jan-2026 21:53:36 (Found 4 errors + 2379 warnings) Compiling jalview/src/jalview/ws/rest/params build 05-Jan-2026 21:53:36 (Found 4 errors + 2380 warnings) Compiling jalview/src/jalview/ws/rest/params build 05-Jan-2026 21:53:36 (Found 4 errors + 2381 warnings) Compiling jalview/src/jalview/ws/rest/params build 05-Jan-2026 21:53:36 (Found 4 errors + 2384 warnings) Compiling jalview/src/jalview/ws/seqfetcher build 05-Jan-2026 21:53:36 (Found 4 errors + 2384 warnings) Compiling jalview/src/jalview/ws/sifts build 05-Jan-2026 21:53:36 (Found 4 errors + 2393 warnings) Compiling jalview/src/jalview/ws/sifts build 05-Jan-2026 21:53:36 (Found 4 errors + 2393 warnings) Compiling jalview/src/jalview/ws/slivkaws build 05-Jan-2026 21:53:36 (Found 4 errors + 2394 warnings) Compiling jalview/src/jalview/ws/slivkaws build 05-Jan-2026 21:53:36 (Found 4 errors + 2395 warnings) Compiling jalview/src/jalview/ws/slivkaws build 05-Jan-2026 21:53:36 (Found 4 errors + 2396 warnings) Compiling jalview/src/jalview/ws/slivkaws build 05-Jan-2026 21:53:36 (Found 4 errors + 2399 warnings) Compiling jalview/src/jalview/ws/uimodel build 05-Jan-2026 21:53:36 (Found 4 errors + 2399 warnings) Compiling jalview/src/jalview/ws/utils build 05-Jan-2026 21:53:36 (Found 4 errors + 2406 warnings) Compiling jalview/src/jalview/ws2/actions build 05-Jan-2026 21:53:36 (Found 4 errors + 2407 warnings) Compiling jalview/src/jalview/ws2/actions build 05-Jan-2026 21:53:36 (Found 4 errors + 2408 warnings) Compiling jalview/src/jalview/ws2/actions build 05-Jan-2026 21:53:36 (Found 4 errors + 2409 warnings) Compiling jalview/src/jalview/ws2/actions build 05-Jan-2026 21:53:36 (Found 4 errors + 2414 warnings) Compiling jalview/src/jalview/ws2/actions/alignment build 05-Jan-2026 21:53:36 (Found 4 errors + 2415 warnings) Compiling jalview/src/jalview/ws2/actions/alignment build 05-Jan-2026 21:53:36 (Found 4 errors + 2416 warnings) Compiling jalview/src/jalview/ws2/actions/alignment build 05-Jan-2026 21:53:36 (Found 4 errors + 2417 warnings) Compiling jalview/src/jalview/ws2/actions/annotation build 05-Jan-2026 21:53:36 (Found 4 errors + 2420 warnings) Compiling jalview/src/jalview/ws2/actions/annotation build 05-Jan-2026 21:53:36 (Found 4 errors + 2422 warnings) Compiling jalview/src/jalview/ws2/actions/api build 05-Jan-2026 21:53:36 (Found 4 errors + 2423 warnings) Compiling jalview/src/jalview/ws2/actions/api build 05-Jan-2026 21:53:36 (Found 4 errors + 2424 warnings) Compiling jalview/src/jalview/ws2/actions/api build 05-Jan-2026 21:53:36 (Found 4 errors + 2427 warnings) Compiling jalview/src/jalview/ws2/actions/hmmer build 05-Jan-2026 21:53:36 (Found 4 errors + 2429 warnings) Compiling jalview/src/jalview/ws2/actions/secstructpred build 05-Jan-2026 21:53:36 (Found 4 errors + 2432 warnings) Compiling jalview/src/jalview/ws2/actions/secstructpred build 05-Jan-2026 21:53:36 (Found 4 errors + 2432 warnings) Compiling jalview/src/jalview/ws2/api build 05-Jan-2026 21:53:36 (Found 4 errors + 2432 warnings) Compiling jalview/src/jalview/ws2/client/api build 05-Jan-2026 21:53:36 (Found 4 errors + 2434 warnings) Compiling jalview/src/jalview/ws2/client/ebi build 05-Jan-2026 21:53:37 (Found 4 errors + 2436 warnings) Compiling jalview/src/jalview/ws2/client/ebi build 05-Jan-2026 21:53:37 (Found 4 errors + 2437 warnings) Compiling jalview/src/jalview/ws2/client/jpred4 build 05-Jan-2026 21:53:37 (Found 4 errors + 2439 warnings) Compiling jalview/src/jalview/ws2/client/jpred4 build 05-Jan-2026 21:53:37 (Found 4 errors + 2442 warnings) Compiling jalview/src/jalview/ws2/client/slivka build 05-Jan-2026 21:53:37 (Found 4 errors + 2444 warnings) Compiling jalview/src/jalview/ws2/client/slivka build 05-Jan-2026 21:53:37 (Found 4 errors + 2445 warnings) Compiling jalview/src/jalview/ws2/client/slivka build 05-Jan-2026 21:53:37 (Found 4 errors + 2453 warnings) Compiling jalview/src/jalview/ws2/gui build 05-Jan-2026 21:53:37 (Found 4 errors + 2457 warnings) Compiling jalview/src/jalview/ws2/gui build 05-Jan-2026 21:53:37 (Found 4 errors + 2460 warnings) Compiling jalview/src/jalview/ws2/gui build 05-Jan-2026 21:53:37 (Found 4 errors + 2460 warnings) Compiling jalview/src/jalview/ws2/helpers build 05-Jan-2026 21:53:37 (Found 4 errors + 2461 warnings) Compiling jalview/src/jalview/ws2/helpers build 05-Jan-2026 21:53:37 (Found 4 errors + 2461 warnings) Compiling jalview/src/jalview/ws2/params build 05-Jan-2026 21:53:37 (Found 4 errors + 2462 warnings) Compiling jalview/src/jalview/ws2/params build 05-Jan-2026 21:53:37 (Found 4 errors + 2462 warnings) Compiling jalview/src/jalview/xml/binding/embl build 05-Jan-2026 21:53:37 (Found 4 errors + 2462 warnings) Compiling jalview/src/jalview/xml/binding/jalview build 05-Jan-2026 21:53:37 (Found 4 errors + 2462 warnings) Compiling jalview/src/jalview/xml/binding/sifts build 05-Jan-2026 21:53:37 (Found 4 errors + 2462 warnings) Compiling jalview/src/jalview/xml/binding/uniprot build 05-Jan-2026 21:53:37 (Found 4 errors + 2463 warnings) Compiling jalview/src/javajs/async build 05-Jan-2026 21:53:37 (Found 4 errors + 2464 warnings) Compiling jalview/src/javajs/async build 05-Jan-2026 21:53:37 (Found 4 errors + 2466 warnings) Compiling jalview/src/javajs/async build 05-Jan-2026 21:53:37 (Found 4 errors + 2473 warnings) Compiling jalview/src/mc_view build 05-Jan-2026 21:53:37 (Found 4 errors + 2474 warnings) Compiling jalview/src/mc_view build 05-Jan-2026 21:53:37 (Found 4 errors + 2479 warnings) Compiling jalview/src/mc_view build 05-Jan-2026 21:53:37 (Found 4 errors + 2486 warnings) Compiling jalview/src/mc_view build 05-Jan-2026 21:53:37 (Found 4 errors + 2489 warnings) Compiling jalview/src/mc_view build 05-Jan-2026 21:53:37 (Found 4 errors + 2490 warnings) Compiling jalview/src/mc_view build 05-Jan-2026 21:53:37 (Found 4 errors + 2490 warnings) Compiling jalview/src/net/meyfa/sha256 build 05-Jan-2026 21:53:37 (Found 4 errors + 2490 warnings) Compiling jalview/src/org/jibble/epsgraphics build 05-Jan-2026 21:53:37 (Found 4 errors + 2491 warnings) Compiling jalview/src/org/jibble/epsgraphics build 05-Jan-2026 21:53:37 (Found 4 errors + 2497 warnings) Compiling jalview/src/org/jibble/epsgraphics build 05-Jan-2026 21:53:37 (Found 4 errors + 2497 warnings) Compiling jalview/src/org/json build 05-Jan-2026 21:53:37 (Found 4 errors + 2498 warnings) Compiling jalview/src/org/json build 05-Jan-2026 21:53:37 (Found 4 errors + 2499 warnings) Compiling jalview/src/org/json build 05-Jan-2026 21:53:37 (Found 4 errors + 2510 warnings) Compiling jalview/src/org/json/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2516 warnings) Compiling jalview/src/org/json/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2525 warnings) Compiling jalview/src/org/json/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2527 warnings) Compiling jalview/src/org/json/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2529 warnings) Compiling jalview/src/org/json/simple/parser build 05-Jan-2026 21:53:37 (Found 4 errors + 2604 warnings) Compiling jalview/src/org/json/simple/parser build 05-Jan-2026 21:53:37 (Found 4 errors + 2608 warnings) Compiling jalview/src/org/json/simple/parser build 05-Jan-2026 21:53:37 (Found 4 errors + 2608 warnings) Compiling jalview/src/org/stackoverflowusers/file build 05-Jan-2026 21:53:37 (Found 4 errors + 2609 warnings) Compiling jalview/src/swingjs/api build 05-Jan-2026 21:53:37 (Found 4 errors + 2609 warnings) Compiling jalview/src/swingjs/api/js build 05-Jan-2026 21:53:37 (Found 4 errors + 2610 warnings) Compiling jalview/src/uk/ac/ebi/picr/model build 05-Jan-2026 21:53:37 (Found 4 errors + 2612 warnings) Compiling jalview/src/uk/ac/ebi/picr/model build 05-Jan-2026 21:53:37 (Found 4 errors + 2613 warnings) Compiling jalview/src/uk/ac/ebi/picr/model build 05-Jan-2026 21:53:37 (Found 4 errors + 2615 warnings) Compiling jalview/src/uk/ac/ebi/picr/model build 05-Jan-2026 21:53:37 (Found 4 errors + 2618 warnings) Compiling jalview/src/uk/ac/ebi/www build 05-Jan-2026 21:53:37 (Found 4 errors + 2621 warnings) Compiling jalview/src/uk/ac/ebi/www build 05-Jan-2026 21:53:37 (Found 4 errors + 2624 warnings) Compiling jalview/src/uk/ac/ebi/www build 05-Jan-2026 21:53:37 (Found 4 errors + 2631 warnings) Compiling jalview/src/uk/ac/ebi/www build 05-Jan-2026 21:53:37 (Found 4 errors + 2679 warnings) Compiling jalview/src/uk/ac/ebi/www build 05-Jan-2026 21:53:37 (Found 4 errors + 2721 warnings) Compiling jalview/src/uk/ac/ebi/www/picr/AccessionMappingService build 05-Jan-2026 21:53:37 (Found 4 errors + 2728 warnings) Compiling jalview/src/uk/ac/ebi/www/picr/AccessionMappingService build 05-Jan-2026 21:53:37 (Found 4 errors + 2728 warnings) Compiling jalview/src/vamsas build 05-Jan-2026 21:53:37 (Found 4 errors + 2729 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2731 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2732 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2734 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2735 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2737 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2738 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2740 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2741 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2743 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2744 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2746 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2747 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2749 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2750 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2752 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2753 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2754 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2756 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2758 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2759 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2761 warnings) Compiling jalview/src/vamsas/objects/simple build 05-Jan-2026 21:53:37 (Found 4 errors + 2761 warnings) Cleaning output folder for jalview build 05-Jan-2026 21:53:37 (Found 4 errors + 2761 warnings) Copying resources to the output folder build 05-Jan-2026 21:53:37 (Found 4 errors + 2761 warnings) Analyzing sources build 05-Jan-2026 21:53:37 J2S buildStarting 315 files, contexts.size() = 2, isBatch=true build 05-Jan-2026 21:53:37 (Found 4 errors + 2761 warnings) Compiling jalview/test/jalview/analysis build 05-Jan-2026 21:53:37 (Found 4 errors + 2771 warnings) Compiling jalview/test/jalview/analysis build 05-Jan-2026 21:53:37 (Found 4 errors + 2786 warnings) Compiling jalview/test/jalview/analysis build 05-Jan-2026 21:53:37 (Found 4 errors + 2799 warnings) Compiling jalview/test/jalview/analysis build 05-Jan-2026 21:53:37 (Found 4 errors + 2801 warnings) Compiling jalview/test/jalview/analysis build 05-Jan-2026 21:53:37 (Found 4 errors + 2803 warnings) Compiling jalview/test/jalview/analysis build 05-Jan-2026 21:53:37 (Found 4 errors + 2844 warnings) Compiling jalview/test/jalview/analysis build 05-Jan-2026 21:53:37 (Found 4 errors + 2844 warnings) Compiling jalview/test/jalview/analysis/scoremodels build 05-Jan-2026 21:53:37 (Found 4 errors + 2849 warnings) Compiling jalview/test/jalview/analysis/scoremodels build 05-Jan-2026 21:53:37 (Found 4 errors + 2850 warnings) Compiling jalview/test/jalview/analysis/scoremodels build 05-Jan-2026 21:53:38 (Found 4 errors + 2856 warnings) Compiling jalview/test/jalview/analysis/scoremodels build 05-Jan-2026 21:53:38 (Found 4 errors + 2857 warnings) Compiling jalview/test/jalview/bin build 05-Jan-2026 21:53:38 (Found 4 errors + 2858 warnings) Compiling jalview/test/jalview/bin build 05-Jan-2026 21:53:38 (Found 4 errors + 2859 warnings) Compiling jalview/test/jalview/bin build 05-Jan-2026 21:53:38 (Found 4 errors + 2862 warnings) Compiling jalview/test/jalview/bin/argparser build 05-Jan-2026 21:53:38 (Found 4 errors + 2869 warnings) Compiling jalview/test/jalview/commands build 05-Jan-2026 21:53:38 (Found 4 errors + 2870 warnings) Compiling jalview/test/jalview/controller build 05-Jan-2026 21:53:38 (Found 4 errors + 2870 warnings) Compiling jalview/test/jalview/datamodel build 05-Jan-2026 21:53:38 (Found 4 errors + 2871 warnings) Compiling jalview/test/jalview/datamodel build 05-Jan-2026 21:53:38 (Found 4 errors + 2885 warnings) Compiling jalview/test/jalview/datamodel build 05-Jan-2026 21:53:38 (Found 4 errors + 2888 warnings) Compiling jalview/test/jalview/datamodel build 05-Jan-2026 21:53:38 (Found 4 errors + 2889 warnings) Compiling jalview/test/jalview/datamodel build 05-Jan-2026 21:53:38 (Found 4 errors + 2891 warnings) Compiling jalview/test/jalview/datamodel build 05-Jan-2026 21:53:38 (Found 4 errors + 2901 warnings) Compiling jalview/test/jalview/datamodel build 05-Jan-2026 21:53:38 (Found 4 errors + 2902 warnings) Compiling jalview/test/jalview/datamodel build 05-Jan-2026 21:53:38 (Found 4 errors + 2904 warnings) Compiling jalview/test/jalview/datamodel build 05-Jan-2026 21:53:38 (Found 4 errors + 2906 warnings) Compiling jalview/test/jalview/datamodel build 05-Jan-2026 21:53:38 (Found 4 errors + 2908 warnings) Compiling jalview/test/jalview/datamodel build 05-Jan-2026 21:53:38 (Found 4 errors + 2909 warnings) Compiling jalview/test/jalview/datamodel build 05-Jan-2026 21:53:38 (Found 4 errors + 2910 warnings) Compiling jalview/test/jalview/datamodel build 05-Jan-2026 21:53:38 (Found 4 errors + 2913 warnings) Compiling jalview/test/jalview/datamodel build 05-Jan-2026 21:53:38 (Found 4 errors + 2914 warnings) Compiling jalview/test/jalview/datamodel/features build 05-Jan-2026 21:53:38 (Found 4 errors + 2915 warnings) Compiling jalview/test/jalview/datamodel/features build 05-Jan-2026 21:53:38 (Found 4 errors + 2915 warnings) Compiling jalview/test/jalview/ext/android build 05-Jan-2026 21:53:38 (Found 4 errors + 2915 warnings) Compiling jalview/test/jalview/ext/ensembl build 05-Jan-2026 21:53:38 (Found 4 errors + 2915 warnings) Compiling jalview/test/jalview/ext/htsjdk build 05-Jan-2026 21:53:38 (Found 4 errors + 2916 warnings) Compiling jalview/test/jalview/ext/jmol build 05-Jan-2026 21:53:38 (Found 4 errors + 2917 warnings) Compiling jalview/test/jalview/ext/jmol build 05-Jan-2026 21:53:38 (Found 4 errors + 2917 warnings) Compiling jalview/test/jalview/ext/paradise build 05-Jan-2026 21:53:38 (Found 4 errors + 2917 warnings) Compiling jalview/test/jalview/ext/pymol build 05-Jan-2026 21:53:38 (Found 4 errors + 2917 warnings) Compiling jalview/test/jalview/ext/rbvi/chimera build 05-Jan-2026 21:53:38 (Found 4 errors + 2917 warnings) Compiling jalview/test/jalview/ext/so build 05-Jan-2026 21:53:38 (Found 4 errors + 2917 warnings) Compiling jalview/test/jalview/fts/core build 05-Jan-2026 21:53:38 (Found 4 errors + 2917 warnings) Compiling jalview/test/jalview/fts/service/pdb build 05-Jan-2026 21:53:38 (Found 4 errors + 2918 warnings) Compiling jalview/test/jalview/fts/service/pdb build 05-Jan-2026 21:53:38 (Found 4 errors + 2925 warnings) Compiling jalview/test/jalview/fts/threedbeacons build 05-Jan-2026 21:53:38 (Found 4 errors + 2930 warnings) Compiling jalview/test/jalview/fts/threedbeacons build 05-Jan-2026 21:53:38 (Found 4 errors + 2931 warnings) Compiling jalview/test/jalview/gui build 05-Jan-2026 21:53:38 (Found 4 errors + 2933 warnings) Compiling jalview/test/jalview/gui build 05-Jan-2026 21:53:38 (Found 4 errors + 2934 warnings) Compiling jalview/test/jalview/gui build 05-Jan-2026 21:53:38 (Found 4 errors + 2936 warnings) Compiling jalview/test/jalview/gui build 05-Jan-2026 21:53:38 (Found 4 errors + 2937 warnings) Compiling jalview/test/jalview/gui build 05-Jan-2026 21:53:38 (Found 4 errors + 2957 warnings) Compiling jalview/test/jalview/gui build 05-Jan-2026 21:53:38 (Found 4 errors + 2982 warnings) Compiling jalview/test/jalview/gui build 05-Jan-2026 21:53:38 (Found 4 errors + 2983 warnings) Compiling jalview/test/jalview/gui build 05-Jan-2026 21:53:38 (Found 4 errors + 2985 warnings) Compiling jalview/test/jalview/gui build 05-Jan-2026 21:53:38 (Found 4 errors + 2988 warnings) Compiling jalview/test/jalview/gui build 05-Jan-2026 21:53:38 (Found 4 errors + 2989 warnings) Compiling jalview/test/jalview/gui build 05-Jan-2026 21:53:38 (Found 4 errors + 2990 warnings) Compiling jalview/test/jalview/gui build 05-Jan-2026 21:53:38 (Found 4 errors + 2991 warnings) Compiling jalview/test/jalview/gui build 05-Jan-2026 21:53:38 (Found 4 errors + 2993 warnings) Compiling jalview/test/jalview/gui build 05-Jan-2026 21:53:38 (Found 4 errors + 2999 warnings) Compiling jalview/test/jalview/gui/structurechooser build 05-Jan-2026 21:53:38 (Found 4 errors + 2999 warnings) Compiling jalview/test/jalview/hmmer build 05-Jan-2026 21:53:38 (Found 4 errors + 3000 warnings) Compiling jalview/test/jalview/io build 05-Jan-2026 21:53:38 (Found 4 errors + 3004 warnings) Compiling jalview/test/jalview/io build 05-Jan-2026 21:53:38 (Found 4 errors + 3008 warnings) Compiling jalview/test/jalview/io build 05-Jan-2026 21:53:38 (Found 4 errors + 3012 warnings) Compiling jalview/test/jalview/io build 05-Jan-2026 21:53:38 (Found 4 errors + 3014 warnings) Compiling jalview/test/jalview/io build 05-Jan-2026 21:53:38 (Found 4 errors + 3015 warnings) Compiling jalview/test/jalview/io build 05-Jan-2026 21:53:38 (Found 4 errors + 3016 warnings) Compiling jalview/test/jalview/io build 05-Jan-2026 21:53:38 (Found 4 errors + 3023 warnings) Compiling jalview/test/jalview/io build 05-Jan-2026 21:53:38 (Found 4 errors + 3025 warnings) Compiling jalview/test/jalview/io build 05-Jan-2026 21:53:39 (Found 4 errors + 3025 warnings) Compiling jalview/test/jalview/io/cache build 05-Jan-2026 21:53:39 (Found 4 errors + 3025 warnings) Compiling jalview/test/jalview/io/gff build 05-Jan-2026 21:53:39 (Found 4 errors + 3026 warnings) Compiling jalview/test/jalview/io/gff build 05-Jan-2026 21:53:39 (Found 4 errors + 3035 warnings) Compiling jalview/test/jalview/io/vcf build 05-Jan-2026 21:53:39 (Found 4 errors + 3035 warnings) Compiling jalview/test/jalview/math build 05-Jan-2026 21:53:39 (Found 4 errors + 3047 warnings) Compiling jalview/test/jalview/project build 05-Jan-2026 21:53:39 (Found 4 errors + 3048 warnings) Compiling jalview/test/jalview/renderer build 05-Jan-2026 21:53:39 (Found 4 errors + 3050 warnings) Compiling jalview/test/jalview/renderer build 05-Jan-2026 21:53:39 (Found 4 errors + 3056 warnings) Compiling jalview/test/jalview/renderer build 05-Jan-2026 21:53:39 (Found 4 errors + 3057 warnings) Compiling jalview/test/jalview/renderer build 05-Jan-2026 21:53:39 (Found 4 errors + 3058 warnings) Compiling jalview/test/jalview/renderer/seqfeatures build 05-Jan-2026 21:53:39 (Found 4 errors + 3058 warnings) Compiling jalview/test/jalview/schemes build 05-Jan-2026 21:53:39 (Found 4 errors + 3059 warnings) Compiling jalview/test/jalview/schemes build 05-Jan-2026 21:53:39 (Found 4 errors + 3059 warnings) Compiling jalview/test/jalview/structure build 05-Jan-2026 21:53:39 (Found 4 errors + 3061 warnings) Compiling jalview/test/jalview/structure build 05-Jan-2026 21:53:39 (Found 4 errors + 3062 warnings) Compiling jalview/test/jalview/structure build 05-Jan-2026 21:53:39 (Found 4 errors + 3063 warnings) Compiling jalview/test/jalview/structure build 05-Jan-2026 21:53:39 (Found 4 errors + 3066 warnings) Compiling jalview/test/jalview/structure build 05-Jan-2026 21:53:39 (Found 4 errors + 3066 warnings) Compiling jalview/test/jalview/structures/models build 05-Jan-2026 21:53:39 (Found 4 errors + 3066 warnings) Compiling jalview/test/jalview/testutils build 05-Jan-2026 21:53:39 (Found 4 errors + 3067 warnings) Compiling jalview/test/jalview/testutils build 05-Jan-2026 21:53:39 (Found 4 errors + 3068 warnings) Compiling jalview/test/jalview/urls build 05-Jan-2026 21:53:39 (Found 4 errors + 3073 warnings) Compiling jalview/test/jalview/urls build 05-Jan-2026 21:53:39 (Found 4 errors + 3078 warnings) Compiling jalview/test/jalview/urls build 05-Jan-2026 21:53:39 (Found 4 errors + 3078 warnings) Compiling jalview/test/jalview/util build 05-Jan-2026 21:53:39 (Found 4 errors + 3085 warnings) Compiling jalview/test/jalview/util build 05-Jan-2026 21:53:39 (Found 4 errors + 3086 warnings) Compiling jalview/test/jalview/util build 05-Jan-2026 21:53:39 (Found 4 errors + 3087 warnings) Compiling jalview/test/jalview/util build 05-Jan-2026 21:53:39 (Found 4 errors + 3091 warnings) Compiling jalview/test/jalview/util build 05-Jan-2026 21:53:39 (Found 4 errors + 3092 warnings) Compiling jalview/test/jalview/util build 05-Jan-2026 21:53:39 (Found 4 errors + 3097 warnings) Compiling jalview/test/jalview/util build 05-Jan-2026 21:53:39 (Found 4 errors + 3097 warnings) Compiling jalview/test/jalview/util/dialogrunner build 05-Jan-2026 21:53:39 (Found 4 errors + 3097 warnings) Compiling jalview/test/jalview/util/imagemaker build 05-Jan-2026 21:53:39 (Found 4 errors + 3097 warnings) Compiling jalview/test/jalview/util/matcher build 05-Jan-2026 21:53:39 (Found 4 errors + 3100 warnings) Compiling jalview/test/jalview/util/matcher build 05-Jan-2026 21:53:39 (Found 4 errors + 3106 warnings) Compiling jalview/test/jalview/viewmodel build 05-Jan-2026 21:53:39 (Found 4 errors + 3112 warnings) Compiling jalview/test/jalview/viewmodel build 05-Jan-2026 21:53:39 (Found 4 errors + 3114 warnings) Compiling jalview/test/jalview/viewmodel/styles build 05-Jan-2026 21:53:39 (Found 4 errors + 3114 warnings) Compiling jalview/test/jalview/workers build 05-Jan-2026 21:53:39 (Found 4 errors + 3114 warnings) Compiling jalview/test/jalview/ws build 05-Jan-2026 21:53:39 (Found 4 errors + 3116 warnings) Compiling jalview/test/jalview/ws build 05-Jan-2026 21:53:39 (Found 4 errors + 3119 warnings) Compiling jalview/test/jalview/ws/dbsources build 05-Jan-2026 21:53:39 (Found 4 errors + 3137 warnings) Compiling jalview/test/jalview/ws/dbsources build 05-Jan-2026 21:53:39 (Found 4 errors + 3138 warnings) Compiling jalview/test/jalview/ws/dbsources build 05-Jan-2026 21:53:39 (Found 4 errors + 3138 warnings) Compiling jalview/test/jalview/ws/ebi build 05-Jan-2026 21:53:39 (Found 4 errors + 3146 warnings) Compiling jalview/test/jalview/ws/gui build 05-Jan-2026 21:53:39 (Found 4 errors + 3146 warnings) Compiling jalview/test/jalview/ws/jabaws build 05-Jan-2026 21:53:39 (Found 4 errors + 3147 warnings) Compiling jalview/test/jalview/ws/jabaws build 05-Jan-2026 21:53:39 (Found 4 errors + 3148 warnings) Compiling jalview/test/jalview/ws/jabaws build 05-Jan-2026 21:53:39 (Found 4 errors + 3149 warnings) Compiling jalview/test/jalview/ws/jabaws build 05-Jan-2026 21:53:39 (Found 4 errors + 3153 warnings) Compiling jalview/test/jalview/ws/jabaws build 05-Jan-2026 21:53:39 (Found 4 errors + 3171 warnings) Compiling jalview/test/jalview/ws/jws2 build 05-Jan-2026 21:53:39 (Found 4 errors + 3171 warnings) Compiling jalview/test/jalview/ws/rest build 05-Jan-2026 21:53:39 (Found 4 errors + 3172 warnings) Compiling jalview/test/jalview/ws/rest build 05-Jan-2026 21:53:39 (Found 4 errors + 3172 warnings) Compiling jalview/test/jalview/ws/seqfetcher build 05-Jan-2026 21:53:39 (Found 4 errors + 3172 warnings) Compiling jalview/test/jalview/ws/sifts build 05-Jan-2026 21:53:39 (Found 4 errors + 3174 warnings) Compiling jalview/test/jalview/ws/utils build 05-Jan-2026 21:53:39 (Found 4 errors + 3182 warnings) Compiling jalview/test/jalview/ws2/actions/alignment build 05-Jan-2026 21:53:39 (Found 4 errors + 3182 warnings) Compiling jalview/test/jalview/ws2/actions/annotation build 05-Jan-2026 21:53:39 (Found 4 errors + 3182 warnings) Compiling jalview/test/jalview/ws2/actions/secstructpred build 05-Jan-2026 21:53:39 (Found 4 errors + 3182 warnings) Compiling jalview/test/jalview/ws2/client/slivka build 05-Jan-2026 21:53:39 (Found 4 errors + 3198 warnings) Compiling jalview/test/junit/extensions build 05-Jan-2026 21:53:39 (Found 4 errors + 3200 warnings) Compiling jalview/test/junit/extensions build 05-Jan-2026 21:53:39 (Found 4 errors + 3200 warnings) Compiling jalview/test/mc_view build 05-Jan-2026 21:53:39 (Found 4 errors + 3201 warnings) Compiling jalview/test/mc_view build 05-Jan-2026 21:53:39 J2S using configuration file /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/.j2s build 05-Jan-2026 21:53:39 j2s.config.altfileproperty = org.jalview.jalviewjsj2sfilename build 05-Jan-2026 21:53:39 J2S System.getProperty("org.jalview.jalviewjsj2sfilename") = ./build/jalviewjs/config/j2s build 05-Jan-2026 21:53:39 J2S using configuration file /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/./build/jalviewjs/config/j2s build 05-Jan-2026 21:53:39 j2s.compiler.status = enable build 05-Jan-2026 21:53:39 j2s.compiler.java.version = 8 build 05-Jan-2026 21:53:39 J2S compiler version set to 8 build 05-Jan-2026 21:53:39 j2s.break.on.error = false build 05-Jan-2026 21:53:39 j2s.exact.long = true build 05-Jan-2026 21:53:39 j2s.async.thread = false build 05-Jan-2026 21:53:39 j2s.compiler.mode = nodebug build 05-Jan-2026 21:53:39 j2s.site.directory = ./build/jalviewjs/tmp/site_js build 05-Jan-2026 21:53:39 J2S writing to /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/./build/jalviewjs/tmp/site_js/swingjs/j2s build 05-Jan-2026 21:53:39 j2s.log.methods.declared = build 05-Jan-2026 21:53:39 j2s.log.methods.called = build 05-Jan-2026 21:53:39 j2s.excluded.paths = test;testng;util build 05-Jan-2026 21:53:39 j2s.compiler.read.annotations = true build 05-Jan-2026 21:53:39 j2s.compiler.ignored.annotations = CallerSensitive;ConstructorProperties;Deprecated;Override;SafeVarargs;SuppressWarnings;FunctionalInterface;Documented;Inherited;Native;Repeatable;Retention; build 05-Jan-2026 21:53:39 j2s.testing = false build 05-Jan-2026 21:53:39 j2s.compiler.nonqualified.packages = build 05-Jan-2026 21:53:39 j2s.compiler.nonqualified.classes = build 05-Jan-2026 21:53:39 j2s.class.replacements = build 05-Jan-2026 21:53:39 j2s.template.html = utils/jalviewjs/template.html build 05-Jan-2026 21:53:39 J2S using HTML template /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/utils/jalviewjs/template.html build 05-Jan-2026 21:53:39 J2S building JavaScript jalview /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1 Mon Jan 05 21:53:39 GMT 2026 build 05-Jan-2026 21:53:39 J2S building JavaScript for 1253 files build 05-Jan-2026 21:53:39 J2S transpiling (1/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/github/reinert/jjschema/Attributes.java build 05-Jan-2026 21:53:40 j2s copying resources from /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com to /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/./build/jalviewjs/tmp/site_js/swingjs/j2s/com build 05-Jan-2026 21:53:40 J2S transpiling (2/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/AmpersandRule.java build 05-Jan-2026 21:53:40 J2S transpiling (3/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/Any.java build 05-Jan-2026 21:53:40 J2S transpiling (4/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/BackG.java build 05-Jan-2026 21:53:40 J2S transpiling (5/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/BackMatch.java build 05-Jan-2026 21:53:40 J2S transpiling (6/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/BackRefRule.java build 05-Jan-2026 21:53:40 J2S transpiling (7/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/Backup.java build 05-Jan-2026 21:53:40 J2S transpiling (8/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/BasicStringBufferLike.java build 05-Jan-2026 21:53:40 J2S transpiling (9/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/Bits.java build 05-Jan-2026 21:53:40 J2S transpiling (10/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/Boundary.java build 05-Jan-2026 21:53:40 J2S transpiling (11/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/Bracket.java build 05-Jan-2026 21:53:40 J2S transpiling (12/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/CaseMgr.java build 05-Jan-2026 21:53:40 J2S transpiling (13/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/ChangeRule.java build 05-Jan-2026 21:53:40 J2S transpiling (14/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/CodeRule.java build 05-Jan-2026 21:53:40 J2S transpiling (15/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/Ctrl.java build 05-Jan-2026 21:53:40 J2S transpiling (16/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/Custom.java build 05-Jan-2026 21:53:40 J2S transpiling (17/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/CustomEndpoint.java build 05-Jan-2026 21:53:40 J2S transpiling (18/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/DirFileRegex.java build 05-Jan-2026 21:53:40 J2S transpiling (19/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/DotMulti.java build 05-Jan-2026 21:53:40 J2S transpiling (20/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/End.java build 05-Jan-2026 21:53:40 J2S transpiling (21/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/FastBracket.java build 05-Jan-2026 21:53:40 J2S transpiling (22/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/FastMulti.java build 05-Jan-2026 21:53:40 J2S transpiling (23/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/FileRegex.java build 05-Jan-2026 21:53:40 J2S transpiling (24/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/Group.java build 05-Jan-2026 21:53:40 J2S transpiling (25/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/LeftRule.java build 05-Jan-2026 21:53:41 J2S transpiling (26/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/Multi.java build 05-Jan-2026 21:53:41 J2S transpiling (27/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/MultiMin.java build 05-Jan-2026 21:53:41 J2S transpiling (28/1253) /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/src/com/stevesoft/pat/Multi_stage2.java build 05-Jan-2026 21:53:41 J2S transpiling (29/1253) 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Took 1 mins 14.669 secs. build 05-Jan-2026 21:54:07 :jalviewjsCopyTransferSiteJs (Thread[included builds,5,main]) started. build 05-Jan-2026 21:54:08 build 05-Jan-2026 21:54:08 > Task :jalviewjsCopyTransferSiteJs build 05-Jan-2026 21:54:08 Caching disabled for task ':jalviewjsCopyTransferSiteJs' because: build 05-Jan-2026 21:54:08 Build cache is disabled build 05-Jan-2026 21:54:08 Task ':jalviewjsCopyTransferSiteJs' is not up-to-date because: build 05-Jan-2026 21:54:08 No history is available. build 05-Jan-2026 21:54:08 :jalviewjsCopyTransferSiteJs (Thread[included builds,5,main]) completed. Took 0.345 secs. build 05-Jan-2026 21:54:08 :jalviewjsTransferUnzipLib (Thread[included builds,5,main]) started. build 05-Jan-2026 21:54:08 build 05-Jan-2026 21:54:08 > Task :jalviewjsTransferUnzipLib build 05-Jan-2026 21:54:08 Caching disabled for task ':jalviewjsTransferUnzipLib' because: build 05-Jan-2026 21:54:08 Build cache is disabled build 05-Jan-2026 21:54:08 Task ':jalviewjsTransferUnzipLib' is not up-to-date because: build 05-Jan-2026 21:54:08 No history is available. build 05-Jan-2026 21:54:08 :jalviewjsTransferUnzipLib (Thread[included builds,5,main]) completed. Took 0.615 secs. build 05-Jan-2026 21:54:08 :jalviewjsTransferUnzipSwingJs (Thread[included builds,5,main]) started. build 05-Jan-2026 21:54:09 build 05-Jan-2026 21:54:09 > Task :jalviewjsTransferUnzipSwingJs build 05-Jan-2026 21:54:09 Caching disabled for task ':jalviewjsTransferUnzipSwingJs' because: build 05-Jan-2026 21:54:09 Build cache is disabled build 05-Jan-2026 21:54:09 Task ':jalviewjsTransferUnzipSwingJs' is not up-to-date because: build 05-Jan-2026 21:54:09 No history is available. build 05-Jan-2026 21:54:09 :jalviewjsTransferUnzipSwingJs (Thread[included builds,5,main]) completed. Took 1.009 secs. build 05-Jan-2026 21:54:09 :jalviewjsTransferUnzipAllLibs (Thread[included builds,5,main]) started. build 05-Jan-2026 21:54:09 build 05-Jan-2026 21:54:09 > Task :jalviewjsTransferUnzipAllLibs build 05-Jan-2026 21:54:09 Skipping task ':jalviewjsTransferUnzipAllLibs' as it has no actions. build 05-Jan-2026 21:54:09 :jalviewjsTransferUnzipAllLibs (Thread[included builds,5,main]) completed. Took 0.0 secs. build 05-Jan-2026 21:54:09 :jalviewjsSyncAllLibs (Thread[included builds,5,main]) started. build 05-Jan-2026 21:54:11 build 05-Jan-2026 21:54:11 > Task :jalviewjsSyncAllLibs build 05-Jan-2026 21:54:11 Caching disabled for task ':jalviewjsSyncAllLibs' because: build 05-Jan-2026 21:54:11 Build cache is disabled build 05-Jan-2026 21:54:11 Task ':jalviewjsSyncAllLibs' is not up-to-date because: build 05-Jan-2026 21:54:11 No history is available. build 05-Jan-2026 21:54:11 :jalviewjsSyncAllLibs (Thread[included builds,5,main]) completed. Took 1.328 secs. build 05-Jan-2026 21:54:11 :copyResources (Thread[included builds,5,main]) started. build 05-Jan-2026 21:54:11 build 05-Jan-2026 21:54:11 > Task :copyResources build 05-Jan-2026 21:54:11 Caching disabled for task ':copyResources' because: build 05-Jan-2026 21:54:11 Build cache is disabled build 05-Jan-2026 21:54:11 Task ':copyResources' is not up-to-date because: build 05-Jan-2026 21:54:11 No history is available. build 05-Jan-2026 21:54:11 :copyResources (Thread[included builds,5,main]) completed. Took 0.099 secs. build 05-Jan-2026 21:54:11 :createBuildProperties (Thread[included builds,5,main]) started. build 05-Jan-2026 21:54:11 build 05-Jan-2026 21:54:11 > Task :createBuildProperties build 05-Jan-2026 21:54:11 Caching disabled for task ':createBuildProperties' because: build 05-Jan-2026 21:54:11 Build cache is disabled build 05-Jan-2026 21:54:11 Task ':createBuildProperties' is not up-to-date because: build 05-Jan-2026 21:54:11 No history is available. build 05-Jan-2026 21:54:11 :createBuildProperties (Thread[included builds,5,main]) completed. Took 0.007 secs. build 05-Jan-2026 21:54:11 :jalviewjsSyncBuildProperties (Thread[included builds,5,main]) started. build 05-Jan-2026 21:54:11 build 05-Jan-2026 21:54:11 > Task :jalviewjsSyncBuildProperties build 05-Jan-2026 21:54:11 Caching disabled for task ':jalviewjsSyncBuildProperties' because: build 05-Jan-2026 21:54:11 Build cache is disabled build 05-Jan-2026 21:54:11 Task ':jalviewjsSyncBuildProperties' is not up-to-date because: build 05-Jan-2026 21:54:11 No history is available. build 05-Jan-2026 21:54:11 :jalviewjsSyncBuildProperties (Thread[included builds,5,main]) completed. Took 0.137 secs. build 05-Jan-2026 21:54:11 :jalviewjsBuildAllCores (Thread[Execution worker for ':',5,main]) started. build 05-Jan-2026 21:54:13 build 05-Jan-2026 21:54:13 > Task :jalviewjsBuildAllCores build 05-Jan-2026 21:54:13 Execution optimizations have been disabled for task ':jalviewjsBuildAllCores' to ensure correctness due to the following reasons: build 05-Jan-2026 21:54:13 - Gradle detected a problem with the following location: '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/tmp/site_lib/swingjs/j2s'. Reason: Task ':jalviewjsBuildAllCores' uses this output of task ':jalviewjsTransferUnzipLib' without declaring an explicit or implicit dependency. This can lead to incorrect results being produced, depending on what order the tasks are executed. Please refer to https://docs.gradle.org/7.4.2/userguide/validation_problems.html#implicit_dependency for more details about this problem. build 05-Jan-2026 21:54:13 Invalidating VFS because task ':jalviewjsBuildAllCores' failed validation build 05-Jan-2026 21:54:13 Caching disabled for task ':jalviewjsBuildAllCores' because: build 05-Jan-2026 21:54:13 Build cache is disabled build 05-Jan-2026 21:54:13 Task ':jalviewjsBuildAllCores' is not up-to-date because: build 05-Jan-2026 21:54:13 No history is available. build 05-Jan-2026 21:54:13 Creating core for stevesoft... build 05-Jan-2026 21:54:13 Generating ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corestevesoft.js build 05-Jan-2026 21:54:13 Generating ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corestevesoft.z.js build 05-Jan-2026 21:54:13 build 05-Jan-2026 21:54:13 Running '/srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java -Xmx2g -Dfile.encoding=UTF-8 -Duser.country=GB -Duser.language=en -Duser.variant -cp /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/tools/closure_compiler.jar com.google.javascript.jscomp.CommandLineRunner --compilation_level SIMPLE_OPTIMIZATIONS --warning_level QUIET --charset UTF-8 --js ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corestevesoft.js --js_output_file ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corestevesoft.z.js' build 05-Jan-2026 21:54:13 build 05-Jan-2026 21:54:13 Starting process 'command '/srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java''. Working directory: /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1 Command: /srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java -Xmx2g -Dfile.encoding=UTF-8 -Duser.country=GB -Duser.language=en -Duser.variant -cp /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/tools/closure_compiler.jar com.google.javascript.jscomp.CommandLineRunner --compilation_level SIMPLE_OPTIMIZATIONS --warning_level QUIET --charset UTF-8 --js ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corestevesoft.js --js_output_file ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corestevesoft.z.js build 05-Jan-2026 21:54:13 Successfully started process 'command '/srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java'' build 05-Jan-2026 21:54:14 -- build 05-Jan-2026 21:54:14 Creating core for jvjmol... build 05-Jan-2026 21:54:14 Generating ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corejvjmol.js build 05-Jan-2026 21:54:14 Generating ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corejvjmol.z.js build 05-Jan-2026 21:54:14 build 05-Jan-2026 21:54:14 Running '/srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java -Xmx2g -Dfile.encoding=UTF-8 -Duser.country=GB -Duser.language=en -Duser.variant -cp /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/tools/closure_compiler.jar com.google.javascript.jscomp.CommandLineRunner --compilation_level SIMPLE_OPTIMIZATIONS --warning_level QUIET --charset UTF-8 --js ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corejvjmol.js --js_output_file ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corejvjmol.z.js' build 05-Jan-2026 21:54:14 build 05-Jan-2026 21:54:14 Starting process 'command '/srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java''. Working directory: /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1 Command: /srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java -Xmx2g -Dfile.encoding=UTF-8 -Duser.country=GB -Duser.language=en -Duser.variant -cp /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/tools/closure_compiler.jar com.google.javascript.jscomp.CommandLineRunner --compilation_level SIMPLE_OPTIMIZATIONS --warning_level QUIET --charset UTF-8 --js ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corejvjmol.js --js_output_file ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corejvjmol.z.js build 05-Jan-2026 21:54:14 Successfully started process 'command '/srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java'' build 05-Jan-2026 21:54:16 -- build 05-Jan-2026 21:54:16 Creating core for jalview... build 05-Jan-2026 21:54:16 Generating ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corejalview.js build 05-Jan-2026 21:54:16 Generating ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corejalview.z.js build 05-Jan-2026 21:54:16 build 05-Jan-2026 21:54:16 Running '/srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java -Xmx2g -Dfile.encoding=UTF-8 -Duser.country=GB -Duser.language=en -Duser.variant -cp /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/tools/closure_compiler.jar com.google.javascript.jscomp.CommandLineRunner --compilation_level SIMPLE_OPTIMIZATIONS --warning_level QUIET --charset UTF-8 --js ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corejalview.js --js_output_file ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corejalview.z.js' build 05-Jan-2026 21:54:16 build 05-Jan-2026 21:54:16 Starting process 'command '/srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java''. Working directory: /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1 Command: /srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java -Xmx2g -Dfile.encoding=UTF-8 -Duser.country=GB -Duser.language=en -Duser.variant -cp /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/tools/closure_compiler.jar com.google.javascript.jscomp.CommandLineRunner --compilation_level SIMPLE_OPTIMIZATIONS --warning_level QUIET --charset UTF-8 --js ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corejalview.js --js_output_file ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corejalview.z.js build 05-Jan-2026 21:54:16 Successfully started process 'command '/srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java'' build 05-Jan-2026 21:54:28 -- build 05-Jan-2026 21:54:28 Creating core for jvexamplefile... build 05-Jan-2026 21:54:28 Generating ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corejvexamplefile.js build 05-Jan-2026 21:54:29 Generating ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corejvexamplefile.z.js build 05-Jan-2026 21:54:29 build 05-Jan-2026 21:54:29 Running '/srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java -Xmx2g -Dfile.encoding=UTF-8 -Duser.country=GB -Duser.language=en -Duser.variant -cp /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/tools/closure_compiler.jar com.google.javascript.jscomp.CommandLineRunner --compilation_level SIMPLE_OPTIMIZATIONS --warning_level QUIET --charset UTF-8 --js ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corejvexamplefile.js --js_output_file ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corejvexamplefile.z.js' build 05-Jan-2026 21:54:29 build 05-Jan-2026 21:54:29 Starting process 'command '/srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java''. Working directory: /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1 Command: /srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java -Xmx2g -Dfile.encoding=UTF-8 -Duser.country=GB -Duser.language=en -Duser.variant -cp /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/tools/closure_compiler.jar com.google.javascript.jscomp.CommandLineRunner --compilation_level SIMPLE_OPTIMIZATIONS --warning_level QUIET --charset UTF-8 --js ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corejvexamplefile.js --js_output_file ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/corejvexamplefile.z.js build 05-Jan-2026 21:54:29 Successfully started process 'command '/srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java'' build 05-Jan-2026 21:54:31 -- build 05-Jan-2026 21:54:31 Creating core for _stevesoft... build 05-Jan-2026 21:54:31 Generating ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/core_stevesoft.js build 05-Jan-2026 21:54:31 Generating ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/core_stevesoft.z.js build 05-Jan-2026 21:54:31 build 05-Jan-2026 21:54:31 Running '/srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java -Xmx2g -Dfile.encoding=UTF-8 -Duser.country=GB -Duser.language=en -Duser.variant -cp /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/tools/closure_compiler.jar com.google.javascript.jscomp.CommandLineRunner --compilation_level SIMPLE_OPTIMIZATIONS --warning_level QUIET --charset UTF-8 --js ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/core_stevesoft.js --js_output_file ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/core_stevesoft.z.js' build 05-Jan-2026 21:54:31 build 05-Jan-2026 21:54:31 Starting process 'command '/srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java''. Working directory: /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1 Command: /srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java -Xmx2g -Dfile.encoding=UTF-8 -Duser.country=GB -Duser.language=en -Duser.variant -cp /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/tools/closure_compiler.jar com.google.javascript.jscomp.CommandLineRunner --compilation_level SIMPLE_OPTIMIZATIONS --warning_level QUIET --charset UTF-8 --js ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/core_stevesoft.js --js_output_file ./build/jalviewjs/tmp/site_core/swingjs/j2s/core/core_stevesoft.z.js build 05-Jan-2026 21:54:31 Successfully started process 'command '/srv/bamboo/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/bin/java'' build 05-Jan-2026 21:54:33 -- build 05-Jan-2026 21:54:33 :jalviewjsBuildAllCores (Thread[Execution worker for ':',5,main]) completed. Took 22.213 secs. build 05-Jan-2026 21:54:33 :jalviewjsPublishCoreTemplates (Thread[Execution worker for ':',5,main]) started. build 05-Jan-2026 21:54:33 build 05-Jan-2026 21:54:33 > Task :jalviewjsPublishCoreTemplates build 05-Jan-2026 21:54:33 Caching disabled for task ':jalviewjsPublishCoreTemplates' because: build 05-Jan-2026 21:54:33 Build cache is disabled build 05-Jan-2026 21:54:33 Task ':jalviewjsPublishCoreTemplates' is not up-to-date because: build 05-Jan-2026 21:54:33 No history is available. build 05-Jan-2026 21:54:33 :jalviewjsPublishCoreTemplates (Thread[Execution worker for ':',5,main]) completed. Took 0.029 secs. build 05-Jan-2026 21:54:33 :jalviewjsSyncCore (Thread[Execution worker for ':',5,main]) started. build 05-Jan-2026 21:54:33 build 05-Jan-2026 21:54:33 > Task :jalviewjsSyncCore build 05-Jan-2026 21:54:33 Caching disabled for task ':jalviewjsSyncCore' because: build 05-Jan-2026 21:54:33 Build cache is disabled build 05-Jan-2026 21:54:33 Task ':jalviewjsSyncCore' is not up-to-date because: build 05-Jan-2026 21:54:33 No history is available. build 05-Jan-2026 21:54:33 :jalviewjsSyncCore (Thread[Execution worker for ':',5,main]) completed. Took 0.195 secs. build 05-Jan-2026 21:54:33 :copyChannelResources (Thread[Execution worker for ':',5,main]) started. build 05-Jan-2026 21:54:33 build 05-Jan-2026 21:54:33 > Task :copyChannelResources build 05-Jan-2026 21:54:33 Execution optimizations have been disabled for task ':copyChannelResources' to ensure correctness due to the following reasons: build 05-Jan-2026 21:54:33 - Gradle detected a problem with the following location: '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/resources/resources_build'. Reason: Task ':createBuildProperties' uses this output of task ':copyChannelResources' without declaring an explicit or implicit dependency. This can lead to incorrect results being produced, depending on what order the tasks are executed. Please refer to https://docs.gradle.org/7.4.2/userguide/validation_problems.html#implicit_dependency for more details about this problem. build 05-Jan-2026 21:54:33 - Gradle detected a problem with the following location: '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/resources/resources_build'. Reason: Task ':jalviewjsSyncBuildProperties' uses this output of task ':copyChannelResources' without declaring an explicit or implicit dependency. This can lead to incorrect results being produced, depending on what order the tasks are executed. Please refer to https://docs.gradle.org/7.4.2/userguide/validation_problems.html#implicit_dependency for more details about this problem. build 05-Jan-2026 21:54:33 Invalidating VFS because task ':copyChannelResources' failed validation build 05-Jan-2026 21:54:33 Caching disabled for task ':copyChannelResources' because: build 05-Jan-2026 21:54:33 Build cache is disabled build 05-Jan-2026 21:54:33 Task ':copyChannelResources' is not up-to-date because: build 05-Jan-2026 21:54:33 No history is available. build 05-Jan-2026 21:54:33 :copyChannelResources (Thread[Execution worker for ':',5,main]) completed. Took 0.024 secs. build 05-Jan-2026 21:54:33 :buildResources (Thread[Execution worker for ':',5,main]) started. build 05-Jan-2026 21:54:33 build 05-Jan-2026 21:54:33 > Task :buildResources build 05-Jan-2026 21:54:33 Skipping task ':buildResources' as it has no actions. build 05-Jan-2026 21:54:33 :buildResources (Thread[Execution worker for ':',5,main]) completed. Took 0.0 secs. build 05-Jan-2026 21:54:33 :jalviewjsSyncResources (Thread[Execution worker for ':',5,main]) started. build 05-Jan-2026 21:54:34 build 05-Jan-2026 21:54:34 > Task :jalviewjsSyncResources build 05-Jan-2026 21:54:34 Caching disabled for task ':jalviewjsSyncResources' because: build 05-Jan-2026 21:54:34 Build cache is disabled build 05-Jan-2026 21:54:34 Task ':jalviewjsSyncResources' is not up-to-date because: build 05-Jan-2026 21:54:34 No history is available. build 05-Jan-2026 21:54:34 :jalviewjsSyncResources (Thread[Execution worker for ':',5,main]) completed. Took 0.155 secs. build 05-Jan-2026 21:54:34 :jalviewjsSyncSiteResources (Thread[Execution worker for ':',5,main]) started. build 05-Jan-2026 21:54:34 build 05-Jan-2026 21:54:34 > Task :jalviewjsSyncSiteResources build 05-Jan-2026 21:54:34 Caching disabled for task ':jalviewjsSyncSiteResources' because: build 05-Jan-2026 21:54:34 Build cache is disabled build 05-Jan-2026 21:54:34 Task ':jalviewjsSyncSiteResources' is not up-to-date because: build 05-Jan-2026 21:54:34 No history is available. build 05-Jan-2026 21:54:34 :jalviewjsSyncSiteResources (Thread[Execution worker for ':',5,main]) completed. Took 0.195 secs. build 05-Jan-2026 21:54:34 :jalviewjsPrepareSite (Thread[Execution worker for ':',5,main]) started. build 05-Jan-2026 21:54:34 build 05-Jan-2026 21:54:34 > Task :jalviewjsPrepareSite build 05-Jan-2026 21:54:34 Skipping task ':jalviewjsPrepareSite' as it has no actions. build 05-Jan-2026 21:54:34 :jalviewjsPrepareSite (Thread[Execution worker for ':',5,main]) completed. Took 0.0 secs. build 05-Jan-2026 21:54:34 :jalviewjsBuildSite (Thread[Execution worker for ':',5,main]) started. build 05-Jan-2026 21:54:34 build 05-Jan-2026 21:54:34 > Task :jalviewjsBuildSite build 05-Jan-2026 21:54:34 Skipping task ':jalviewjsBuildSite' as it has no actions. build 05-Jan-2026 21:54:34 :jalviewjsBuildSite (Thread[Execution worker for ':',5,main]) completed. Took 0.0 secs. build 05-Jan-2026 21:54:34 :cleanJalviewjsChromiumUserDir (Thread[Execution worker for ':',5,main]) started. build 05-Jan-2026 21:54:34 build 05-Jan-2026 21:54:34 > Task :cleanJalviewjsChromiumUserDir build 05-Jan-2026 21:54:34 Caching disabled for task ':cleanJalviewjsChromiumUserDir' because: build 05-Jan-2026 21:54:34 Build cache is disabled build 05-Jan-2026 21:54:34 Task ':cleanJalviewjsChromiumUserDir' is not up-to-date because: build 05-Jan-2026 21:54:34 No history is available. build 05-Jan-2026 21:54:34 :cleanJalviewjsChromiumUserDir (Thread[Execution worker for ':',5,main]) completed. Took 0.003 secs. build 05-Jan-2026 21:54:34 :jalviewjsChromiumProfile (Thread[Execution worker for ':',5,main]) started. build 05-Jan-2026 21:54:34 build 05-Jan-2026 21:54:34 > Task :jalviewjsChromiumProfile build 05-Jan-2026 21:54:34 Caching disabled for task ':jalviewjsChromiumProfile' because: build 05-Jan-2026 21:54:34 Build cache is disabled build 05-Jan-2026 21:54:34 Task ':jalviewjsChromiumProfile' is not up-to-date because: build 05-Jan-2026 21:54:34 No history is available. build 05-Jan-2026 21:54:34 :jalviewjsChromiumProfile (Thread[Execution worker for ':',5,main]) completed. Took 0.003 secs. build 05-Jan-2026 21:54:34 :jalviewjsCopyStderrLaunchFile (Thread[Execution worker for ':',5,main]) started. build 05-Jan-2026 21:54:34 build 05-Jan-2026 21:54:34 > Task :jalviewjsCopyStderrLaunchFile build 05-Jan-2026 21:54:34 Caching disabled for task ':jalviewjsCopyStderrLaunchFile' because: build 05-Jan-2026 21:54:34 Build cache is disabled build 05-Jan-2026 21:54:34 Task ':jalviewjsCopyStderrLaunchFile' is not up-to-date because: build 05-Jan-2026 21:54:34 No history is available. build 05-Jan-2026 21:54:34 :jalviewjsCopyStderrLaunchFile (Thread[Execution worker for ':',5,main]) completed. Took 0.058 secs. build 05-Jan-2026 21:54:34 :jalviewjsLaunchTest (Thread[Execution worker for ':',5,main]) started. build 05-Jan-2026 21:54:34 COMMAND: '/home/bamboo/buildtools/chromium/chrome --no-sandbox --headless=new --disable-gpu --timeout=40000 --virtual-time-budget=40000 --user-data-dir=/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/chromium --profile-directory=BUILD --allow-file-access-from-files --enable-logging=stderr file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/jalview_bin_Jalview-stderr.html' build 05-Jan-2026 21:54:34 Starting process 'command '/home/bamboo/buildtools/chromium/chrome''. Working directory: /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1 Command: /home/bamboo/buildtools/chromium/chrome --no-sandbox --headless=new --disable-gpu --timeout=40000 --virtual-time-budget=40000 --user-data-dir=/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/chromium --profile-directory=BUILD --allow-file-access-from-files --enable-logging=stderr file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/jalview_bin_Jalview-stderr.html build 05-Jan-2026 21:54:34 Successfully started process 'command '/home/bamboo/buildtools/chromium/chrome'' error 05-Jan-2026 21:54:34 [21644:21644:0105/215434.705445:WARNING:chrome_main_delegate.cc(593)] This is Thorium version: 114.0.5735.134 (not a warning) error 05-Jan-2026 21:54:35 [21644:21644:0105/215434.991171:WARNING:chrome_browser_cloud_management_controller.cc(87)] Could not create policy manager as CBCM is not enabled. error 05-Jan-2026 21:54:35 [21644:21659:0105/215435.364666:ERROR:bus.cc(399)] Failed to connect to the bus: Could not parse server address: Unknown address type (examples of valid types are "tcp" and on UNIX "unix") error 05-Jan-2026 21:54:35 [21644:21659:0105/215435.372989:ERROR:bus.cc(399)] Failed to connect to the bus: Could not parse server address: Unknown address type (examples of valid types are "tcp" and on UNIX "unix") error 05-Jan-2026 21:54:35 [21644:21659:0105/215435.373014:ERROR:bus.cc(399)] Failed to connect to the bus: Could not parse server address: Unknown address type (examples of valid types are "tcp" and on UNIX "unix") error 05-Jan-2026 21:54:35 [21644:21659:0105/215435.373026:ERROR:bus.cc(399)] Failed to connect to the bus: Could not parse server address: Unknown address type (examples of valid types are "tcp" and on UNIX "unix") error 05-Jan-2026 21:54:35 [21644:21644:0105/215435.478994:ERROR:chrome_browser_cloud_management_controller.cc(162)] Cloud management controller initialization aborted as CBCM is not enabled. error 05-Jan-2026 21:54:35 [21644:21659:0105/215435.598753:ERROR:bus.cc(399)] Failed to connect to the bus: Could not parse server address: Unknown address type (examples of valid types are "tcp" and on UNIX "unix") error 05-Jan-2026 21:54:35 [21644:21659:0105/215435.598777:ERROR:bus.cc(399)] Failed to connect to the bus: Could not parse server address: Unknown address type (examples of valid types are "tcp" and on UNIX "unix") error 05-Jan-2026 21:54:35 [21672:21672:0105/215435.726973:ERROR:vaapi_wrapper.cc(3273)] Failed to initialize VAAPI libs error 05-Jan-2026 21:54:35 [21672:21672:0105/215435.734295:WARNING:sandbox_linux.cc(393)] InitializeSandbox() called with multiple threads in process gpu-process. error 05-Jan-2026 21:54:35 [21644:21656:0105/215435.759193:WARNING:external_pref_loader.cc(294)] You are using an old-style extension deployment method (external_extensions.json), which will soon be deprecated. (see http://developer.chrome.com/extensions/external_extensions.html) error 05-Jan-2026 21:54:35 [21674:21703:0105/215435.833481:WARNING:dns_client.cc(268)] BuildEffectiveConfig(): invalid configuration error 05-Jan-2026 21:54:35 [21674:21703:0105/215435.835241:WARNING:dns_client.cc(268)] BuildEffectiveConfig(): invalid configuration error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.058635:WARNING:bluez_dbus_manager.cc(247)] Floss manager not present, cannot set Floss enable/disable. error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.058731:ERROR:object_proxy.cc(590)] Failed to call method: org.freedesktop.portal.Settings.Read: object_path= /org/freedesktop/portal/desktop: unknown error type: build 05-Jan-2026 21:54:36 build 05-Jan-2026 21:54:36 > Task :jalviewjsLaunchTest build 05-Jan-2026 21:54:36 Caching disabled for task ':jalviewjsLaunchTest' because: build 05-Jan-2026 21:54:36 Build cache is disabled build 05-Jan-2026 21:54:36 Task ':jalviewjsLaunchTest' is not up-to-date because: build 05-Jan-2026 21:54:36 Task has not declared any outputs despite executing actions. build 05-Jan-2026 21:54:36 error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.440672:INFO:CONSOLE(13141)] "J2SApplet load testApplet loadClazz...", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (13141) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.440698:INFO:CONSOLE(13141)] "J2SApplet load testApplet start applet...", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (13141) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.541080:INFO:CONSOLE(13084)] "j2sApplet exec testApplet loadClazz null -- OK", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (13084) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.555900:INFO:CONSOLE(17180)] "j2sApplet exec testApplet start applet null error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.555918:INFO:CONSOLE(13084)] "j2sApplet exec testApplet start applet null -- OK", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (13084) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.557349:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/Class.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.565932:INFO:CONSOLE(26)] "transpiler was unknown now 3.3.1-v1 for java.lang.Class error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/jalview_bin_Jalview-stderr.html (26) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.565951:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/bin/Jalview.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.568983:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/bin/groovy/JalviewObjectI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.570939:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/bin/ApplicationSingletonProvider.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.575995:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/util/Platform.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.580504:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/JSUtil.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.586065:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/api/JSUtilI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.590496:INFO:CONSOLE(17180)] "swingjs.JSUtil initialized;debug=false error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.590694:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/GraphicsEnvironment.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.592839:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/Toolkit.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.596182:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/JSToolkit.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.600528:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/awt/SunToolkit.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.602851:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/awt/ComponentFactory.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.606500:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/HashMap.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.610545:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/AbstractMap.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.612190:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Map.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.614843:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/beans/PropertyChangeSupport.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.617143:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/beans/ChangeListenerMap.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.619903:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/beans/PropertyChangeListener.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.621278:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/EventListener.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.622941:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/EventQueue.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.625482:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/Queue.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.638101:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/Thread.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.648295:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/ThreadGroup.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.651656:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/JSThreadGroup.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.654752:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javajs/util/JSThread.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.657391:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/awt/AppContext.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.659948:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/awt/PostEventQueue.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.662430:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/awt/MostRecentThreadAppContext.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.664769:INFO:CONSOLE(17180)] "JSToolkit initialized error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.664785:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/reflect/Method.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.666705:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/reflect/AccessibleObject.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.671284:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/reflect/AnnotatedElement.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.675704:INFO:CONSOLE(26)] "Could not find Toolkit method getMenuShortcutKeyMaskEx. Trying getMenuShortcutKeyMask. error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/jalview_bin_Jalview-stderr.html (26) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.676250:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Hashtable.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.684663:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Dictionary.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.688808:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/JSAppletViewer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.691771:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/JSFrameViewer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.693763:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/JSApp.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.701588:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/api/js/JSInterface.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.707151:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/applet/AppletStub.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.709602:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/applet/AppletContext.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.713468:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/net/URL.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.715848:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/api/Interface.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.718105:INFO:CONSOLE(17180)] "swingjs.api.Interface creating instance of javajs.util.AjaxURLStreamHandlerFactory error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.718120:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javajs/util/AjaxURLStreamHandlerFactory.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.720863:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/net/URLStreamHandlerFactory.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.724279:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/AbstractSet.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.726576:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/AbstractCollection.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.728156:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Collection.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.729896:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/Iterable.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.732215:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Set.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.736168:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Enumeration.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.737504:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Iterator.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.746336:INFO:CONSOLE(17180)] "JSApp get parameter: language = null error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.746352:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Locale.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.750414:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/locale/BaseLocale.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.752541:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/StringBuilder.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.756913:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/AbstractStringBuilder.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.760112:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/locale/LocaleUtils.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.762799:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/Enum.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.768614:INFO:CONSOLE(17180)] "JSApp get parameter: name = testApplet error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.768627:INFO:CONSOLE(17180)] "JSApp get parameter: syncId = 655722824813538 error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.768635:INFO:CONSOLE(17180)] "JSApp initialized error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.768643:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/Dimension.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.780113:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/geom/Dimension2D.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.791196:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javajs/util/Lst.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.810467:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/ArrayList.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.812314:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/AbstractList.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.815069:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/List.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.818733:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/RandomAccess.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.823906:INFO:CONSOLE(17180)] "JSAppletViewer initializing2 error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.823923:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/Insets.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.828507:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/JSAppletThread.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.831365:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/JSGraphicsConfiguration.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.835120:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/GraphicsConfiguration.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.837238:INFO:CONSOLE(17180)] "JSGraphicsConfiguration initialized error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.837249:INFO:CONSOLE(17180)] "swingjs.api.Interface creating instance of swingjs.JSGraphicsEnvironment error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.837258:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/JSGraphicsEnvironment.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.839719:INFO:CONSOLE(17180)] "JSGraphicsEnvironment initialized error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.839733:INFO:CONSOLE(17180)] "swingjs.api.Interface creating instance of swingjs.JSScreenDevice error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.839744:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/JSScreenDevice.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.841690:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/GraphicsDevice.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.844241:INFO:CONSOLE(17180)] "JSScreenDevice initialized error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.848818:INFO:CONSOLE(17180)] "JSAppletViewer thread run1 mode=0 status=0 error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.848833:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/SwingUtilities.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.857085:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/SwingConstants.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.859317:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/awt/MostRecentKeyValue.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.860656:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/InvocationEvent.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.862147:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/AWTEvent.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.863656:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/EventObject.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.865461:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/ActiveEvent.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.866982:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/awt/AWTAutoShutdown.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.868486:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/HashSet.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.870537:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/IdentityHashMap.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.872882:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/EventDispatchThread.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.875090:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/EventQueueItem.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.877080:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/EventFilter.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.878706:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Arrays.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.882418:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/LinkedHashMap.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.885666:INFO:CONSOLE(17180)] "JSAppletViewer thread run1 mode=1 status=1 error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.885686:INFO:CONSOLE(17180)] "JSAppletViewer runloader error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.885778:INFO:CONSOLE(17180)] "JSApp get parameter: main = jalview.bin.Jalview error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.885833:INFO:CONSOLE(17180)] "swingjs.api.Interface creating instance of swingjs.JSDummyApplet error 05-Jan-2026 21:54:36 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.886182:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/JSDummyApplet.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.888474:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/JApplet.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:36 [21644:21644:0105/215436.890512:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/applet/JSApplet.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.894176:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/JSPanel.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.895181:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/Container.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.898070:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/JSComponent.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.900445:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/Component.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.909090:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/image/ImageObserver.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.911260:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/RootPaneContainer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.915100:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/FlowLayout.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.916821:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/LayoutManager.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.918391:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/ComponentOrientation.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.920411:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/JRootPane.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.923306:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/JComponent.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.927500:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/awt/RequestFocusController.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.929090:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/event/EventListenerList.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.930811:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/JPanel.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.932525:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/UIManager.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.934395:INFO:CONSOLE(17180)] "swingjs.api.Interface creating instance of swingjs.plaf.HTML5LookAndFeel error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.934663:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/HTML5LookAndFeel.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.936909:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/LookAndFeel.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.938342:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/plaf/FontUIResource.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.939502:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/Font.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.942661:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/plaf/UIResource.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.943859:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/UIDefaults.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.946071:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/Color.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.947847:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/Paint.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.950865:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/Transparency.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.952730:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/plaf/ColorUIResource.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.956250:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/swing/SwingLazyValue.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.959430:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/plaf/InsetsUIResource.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.961482:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/plaf/BorderUIResource.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.963633:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/border/Border.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.965072:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/border/EtchedBorder.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.969750:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/border/AbstractBorder.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.971438:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/plaf/DimensionUIResource.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.973524:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/border/EmptyBorder.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.985063:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/RepaintManager.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.990289:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/SwingPaintEventDispatcher.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.992484:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/awt/PaintEventDispatcher.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.994503:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSPanelUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.997463:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSLightweightUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215436.999008:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSComponentUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.004223:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/plaf/ComponentUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.005866:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/peer/ComponentPeer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.008940:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSEventHandler.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.010135:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/event/ChangeListener.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.012178:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/dnd/peer/DropTargetPeer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.018235:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/peer/LightweightPeer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.021179:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/peer/ContainerPeer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.024150:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/beans/PropertyChangeEvent.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.028284:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/KeyboardFocusManager.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.030741:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/KeyEventDispatcher.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.032330:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/KeyEventPostProcessor.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.033935:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/AWTKeyStroke.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.036359:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/LinkedList.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.038722:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/AbstractSequentialList.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.040293:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Deque.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.044576:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Queue.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.047316:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/DefaultKeyboardFocusManager.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.051441:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/DefaultFocusTraversalPolicy.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.053561:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/ContainerOrderFocusTraversalPolicy.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.055884:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/FocusTraversalPolicy.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.058750:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Collections.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.064746:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/JSFocusPeer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.066282:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/peer/KeyboardFocusManagerPeer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.068273:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/api/js/DOMNode.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.070368:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/Cursor.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.073329:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/JLayeredPane.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.075212:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSLayeredPaneUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.077207:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/BorderLayout.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.079109:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/LayoutManager2.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.080846:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/ArrayTable.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.083138:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/FocusManager.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.086884:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/LayoutFocusTraversalPolicy.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.088504:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/SortingFocusTraversalPolicy.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.092844:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/InternalFrameFocusTraversalPolicy.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.095951:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/SwingContainerOrderFocusTraversalPolicy.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.097586:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/SwingDefaultFocusTraversalPolicy.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.099657:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/LayoutComparator.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.101743:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Comparator.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.104514:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSRootPaneUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.106150:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSAppletUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.110101:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/LightweightDispatcher.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.112031:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/AWTEventListener.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.113933:INFO:CONSOLE(17180)] "testApplet loaded error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.113947:INFO:CONSOLE(291)] "testApplet loaded", source: swingjs/j2s/swingjs/JSUtil.js (291) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.119890:INFO:CONSOLE(17180)] "JSAppletViewer thread run1 mode=1 status=76 error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.119906:INFO:CONSOLE(17180)] "testApplet running jalview.bin.Jalview error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.119915:INFO:CONSOLE(291)] "testApplet running jalview.bin.Jalview", source: swingjs/j2s/swingjs/JSUtil.js (291) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.120080:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javajs/util/PT.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.122664:INFO:CONSOLE(17180)] "Running main(args) in class jalview.bin.Jalview error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.127233:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/reflect/Constructor.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.131697:INFO:CONSOLE(17180)] "JSUtil adding known access-control-allow-origin * for domain https://www.jalview.org error 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file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.134624:INFO:CONSOLE(17180)] "Platform adding known access-control-allow-origin * for domain http://www.jalview.org error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.134634:INFO:CONSOLE(17180)] "JSUtil adding known access-control-allow-origin * for domain http://www.compbio.dundee.ac.uk error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.134662:INFO:CONSOLE(17180)] "Platform adding known access-control-allow-origin * for domain http://www.compbio.dundee.ac.uk error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.134669:INFO:CONSOLE(17180)] "JSUtil adding known access-control-allow-origin * for domain https://www.compbio.dundee.ac.uk error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.134693:INFO:CONSOLE(17180)] "Platform adding known access-control-allow-origin * for domain https://www.compbio.dundee.ac.uk error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.135276:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/bin/argparser/BootstrapArgs.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.137221:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Objects.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.138965:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/bin/argparser/Arg.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.141882:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/util/ChannelProperties.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.143517:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Properties.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.145926:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/io/File.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.147658:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/io/FileSystem.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.149433:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javajs/util/AjaxURLStreamHandler.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.151174:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/net/URLStreamHandler.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.153175:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/channel.props", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.154836:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/io/BufferedInputStream.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.156231:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/io/FilterInputStream.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.158197:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/io/InputStream.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.159664:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/io/Closeable.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.160953:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/AutoCloseable.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.162272:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/io/ByteArrayInputStream.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.168586:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/util/HttpUtils.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.170520:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javajs/util/AjaxURLConnection.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.172262:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/net/HttpURLConnection.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.173810:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/net/URLConnection.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.175554:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/net/ContentHandler.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.177486:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javajs/util/Rdr.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.180543:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javajs/api/GenericLineReader.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.181941:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javajs/util/AU.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.185550:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/images/jalview_logo-16.png", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.187133:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/ImageIcon.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.188585:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/Icon.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.190067:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javajs/util/SB.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.192750:INFO:CONSOLE(17180)] "swingjs.api.Interface creating instance of swingjs.JSImagekit error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.192765:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/JSImagekit.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.195047:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/image/ImageConsumer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.200887:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/JSImage.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.202563:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/image/BufferedImage.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.205734:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/Image.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.207150:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/image/RenderedImage.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.208922:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/image/ColorModel.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.212303:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/image/DirectColorModel.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.214612:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/image/PackedColorModel.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.216857:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/color/ColorSpace.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.219318:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/image/Raster.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.221318:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/image/DataBufferInt.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.223501:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/image/DataBuffer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.225884:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/awt/image/DataStealer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.227741:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/awt/image/SunWritableRaster.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.230398:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/image/WritableRaster.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.232964:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/java2d/StateTrackable.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.234798:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/java2d/StateTrackableDelegate.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.236425:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/Point.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.238400:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/geom/Point2D.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.240497:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/image/SinglePixelPackedSampleModel.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.242166:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/image/SampleModel.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.245040:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/awt/image/IntegerInterleavedRaster.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.246928:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/awt/image/IntegerComponentRaster.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.249340:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/Rectangle.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.254172:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/geom/Rectangle2D.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.255231:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/geom/RectangularShape.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.258668:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/Shape.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.268531:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javajs/util/Base64.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.273326:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/images/jalview_logo-32.png", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.282694:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/images/jalview_logo-48.png", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.287439:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/images/jalview_logo-64.png", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.291686:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/images/jalview_logo-128.png", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.301417:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/images/jalview_logo-256.png", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.311642:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/images/jalview_logo-512.png", source: 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[21644:21644:0105/215437.336226:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Spliterators.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.339083:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Spliterator.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.341589:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/stream/StreamSupport.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.343141:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/stream/StreamOpFlag.js", source: 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[21644:21644:0105/215437.352525:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/stream/PipelineHelper.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.354990:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/stream/BaseStream.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.356382:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/stream/Stream.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.358866:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/function/Function.js", source: 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[21644:21644:0105/215437.368423:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/function/Supplier.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.370493:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/StringJoiner.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.372650:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/function/BiConsumer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.374423:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/function/BinaryOperator.js", source: 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[21644:21644:0105/215437.383094:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/stream/TerminalSink.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.384764:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/stream/Sink.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.386503:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/function/Consumer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.389918:INFO:CONSOLE(26)] "launcher.appdir property not found error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/jalview_bin_Jalview-stderr.html (26) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.390116:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/bin/Cache.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.392646:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/datamodel/PDBEntry.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.394710:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/structure/StructureImportSettings.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.396362:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/text/DateFormat.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.397926:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/text/Format.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.399749:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/text/spi/DateFormatProvider.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.400869:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/spi/LocaleServiceProvider.js", source: 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05-Jan-2026 21:54:37 [21644:21644:0105/215437.414358:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/locale/provider/AuxLocaleProviderAdapter.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.417964:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/locale/provider/LocaleDataMetaInfo.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.431698:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/StringTokenizer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.437512:INFO:CONSOLE(9663)] "xhr.open async=false 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[21644:21644:0105/215437.452809:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/text/CharacterIterator.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.454735:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/TimeZone.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.484880:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/calendar/ZoneInfo.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.488353:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/calendar/ZoneInfoFile.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.493650:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/sun/util/calendar/tzdb.dat", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.505320:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/io/DataInputStream.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.506990:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/io/DataInput.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.518585:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Calendar.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.521540:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/spi/CalendarProvider.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.523498:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/locale/provider/CalendarProviderImpl.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.525424:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/GregorianCalendar.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.528190:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/calendar/CalendarSystem.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.529622:INFO:CONSOLE(17180)] "swingjs.api.Interface creating instance of sun.util.calendar.Gregorian error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.529803:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/calendar/Gregorian.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.531232:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/calendar/BaseCalendar.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.533317:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/calendar/AbstractCalendar.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.535513:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/locale/provider/CalendarDataUtility.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.537314:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/spi/CalendarDataProvider.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.538634:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/locale/provider/LocaleServiceProviderPool.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.540593:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/text/spi/BreakIteratorProvider.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.542130:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/text/spi/CollatorProvider.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.543762:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/text/spi/DateFormatSymbolsProvider.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.545044:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/text/spi/DecimalFormatSymbolsProvider.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.546515:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/text/spi/NumberFormatProvider.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.547904:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/spi/CurrencyNameProvider.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.549299:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/spi/LocaleNameProvider.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.551119:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/spi/TimeZoneNameProvider.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.553256:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/locale/provider/CalendarDataProviderImpl.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.555625:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/security/PrivilegedExceptionAction.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.557052:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/ServiceLoader.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.559508:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/locale/provider/LocaleResources.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.561204:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/ref/ReferenceQueue.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.562773:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/resources/LocaleData.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.564519:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/ResourceBundle.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.569461:INFO:CONSOLE(17180)] "JSUtil getting Java resource sun/util/resources/CalendarData.properties error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.569478:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/sun/util/resources/CalendarData.properties", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.571510:INFO:CONSOLE(17180)] "JSUtil caching 1780 bytes for swingjs/j2s/sun/util/resources/CalendarData.properties error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.571528:INFO:CONSOLE(17180)] "swingjs.api.Interface creating instance of java.util.PropertyResourceBundle error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.571535:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/PropertyResourceBundle.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.576581:INFO:CONSOLE(17180)] "JSUtil getting Java resource sun/util/resources/en/CalendarData_en.properties error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.576596:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/sun/util/resources/en/CalendarData_en.properties", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.578910:INFO:CONSOLE(17180)] "JSUtil caching 1943 bytes for swingjs/j2s/sun/util/resources/en/CalendarData_en.properties error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.578931:INFO:CONSOLE(17180)] "JSUtil getting Java resource sun/util/resources/en/CalendarData_en_GB.properties error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.578951:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/sun/util/resources/en/CalendarData_en_GB.properties", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.582971:INFO:CONSOLE(17180)] "JSUtil caching 1786 bytes for swingjs/j2s/sun/util/resources/en/CalendarData_en_GB.properties error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.582994:INFO:CONSOLE(17180)] "JSUtil getting Java resource sun/util/resources/CalendarData.properties error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.583015:INFO:CONSOLE(17180)] "JSUtil getting Java resource sun/util/resources/en/CalendarData_en.properties error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.583032:INFO:CONSOLE(17180)] "JSUtil getting Java resource sun/util/resources/en/CalendarData_en_GB.properties error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.583049:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/calendar/CalendarDate.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.585880:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/calendar/CalendarUtils.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.588193:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/text/DateFormatSymbols.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.590062:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/text/resources/FormatData.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.591868:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/util/resources/ParallelListResourceBundle.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.593717:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/text/resources/en/FormatData_en.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.595184:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/text/resources/en/FormatData_en_GB.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.598670:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/text/NumberFormat.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.601023:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/text/DecimalFormatSymbols.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.603107:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/text/DecimalFormat.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.605797:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/text/FieldPosition.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.607860:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/text/DigitList.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.609672:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/math/RoundingMode.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.615729:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/util/LaunchUtils.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.617491:INFO:CONSOLE(17180)] "Jalview non-release Version: TEST error 05-Jan-2026 21:54:37 Jalview non-release Installation: unknown error 05-Jan-2026 21:54:37 Channel: default error 05-Jan-2026 21:54:37 Build Date: unknown error 05-Jan-2026 21:54:37 Preferences file: unknown error 05-Jan-2026 21:54:37 Log file: unknown error 05-Jan-2026 21:54:37 Java version: 1.8 error 05-Jan-2026 21:54:37 Java home: https://. error 05-Jan-2026 21:54:37 Java launch class: unknown error 05-Jan-2026 21:54:37 Java platform: Mozilla/5.0 5.0 (X11) (Mozilla/5.0 (X11; Linux x86_64) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/114.0.0.0 Safari/537.36) error 05-Jan-2026 21:54:37 Java LAF: SwingJS (swingjs.plaf.HTML5LookAndFeel) error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.617709:INFO:CONSOLE(26)] "Using default properties file '/TEMP/swingjs/.jalview_nonrelease_properties' error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/jalview_bin_Jalview-stderr.html (26) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.618147:INFO:CONSOLE(26)] "Falling back to properties file '/TEMP/swingjs/.jalview_properties' error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/jalview_bin_Jalview-stderr.html (26) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.618159:INFO:CONSOLE(26)] "Could not load bootstrap preferences file '/TEMP/swingjs/.jalview_properties' error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/jalview_bin_Jalview-stderr.html (26) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.618168:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/.build_properties", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.620037:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/.build_properties", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.622356:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/bin/BuildDetails.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.623451:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/api/BuildDetailsI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.625549:INFO:CONSOLE(17180)] "Jalview non-release version: TEST (Source git-commit:b6ff7e553d [bug/JAL-4107_jalviewjs_fixes_on_2_12_branch]) error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.625565:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/bin/ArgsParser.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.626984:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/bin/AppletParams.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.628685:INFO:CONSOLE(17180)] "AppletParams propName=debug argName=null appletName=debug value=false error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.628957:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/log/JLoggerI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.630577:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/log/JLogger.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.638610:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/log/JLoggerLog4j.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.644393:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Formatter.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.647354:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/regex/Pattern.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.649674:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/regex/Matcher.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.652251:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/regex/MatchResult.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.656405:INFO:CONSOLE(17180)] "INFO: Logging initialised at level: INFO error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.656419:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/authors.props", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.658344:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/authors.props", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.665542:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/.build_properties", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.667287:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws/sifts/SiftsSettings.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.668918:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/urls/IdOrgSettings.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.671843:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/io/PIRFile.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.679495:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/io/AlignFile.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.683329:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/io/FileParse.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.685482:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/io/AlignmentFileReaderI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.687052:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/io/AlignmentFileWriterI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.689146:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/bin/argparser/ArgParser.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.692553:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/JumboEnumSet.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.694846:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/util/ArgParserUtils.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.696821:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/io/FileFormats.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.700017:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/io/FileFormat.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.701770:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/io/FileFormatI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.707207:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/gui/Preferences.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.709440:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/jbgui/GPreferences.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.713046:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/gui/JvSwingUtils.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.714842:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/authors.props", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.716669:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/.build_properties", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.718447:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/util/UserAgent.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.720224:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/gui/Desktop.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.723521:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/jbgui/GDesktop.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.725482:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/JFrame.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.727233:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/JSFrame.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.728625:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/Window.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.731013:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/WindowConstants.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.732452:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/dnd/DropTargetListener.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.733690:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/datatransfer/ClipboardOwner.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.735066:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/gui/IProgressIndicator.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.736333:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/api/StructureSelectionManagerProvider.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.737707:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/gui/SplashScreen.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.739193:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/event/HyperlinkListener.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.740546:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javajs/async/SwingJSUtils.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.743118:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/images/barton_group-32.png", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.745761:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/images/UoD_banner-32.png", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.749029:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Vector.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.753703:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/JSGraphics2D.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.756143:INFO:CONSOLE(17180)] "JSGraphics2D pixelRatio is 1.0 error 05-Jan-2026 21:54:37 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.756466:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/RenderingHints.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.762324:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/geom/AffineTransform.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.765595:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/BasicStroke.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.767126:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/Stroke.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.778892:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSFrameUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.782235:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSWindowUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.784614:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/peer/WindowPeer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.787490:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/WindowListener.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.789779:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/ComponentListener.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.793241:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/peer/FramePeer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.795361:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/AWTEventMulticaster.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.797031:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/ContainerListener.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.798442:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/FocusListener.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.799657:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/KeyListener.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.802278:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/MouseListener.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.804751:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/MouseMotionListener.js", source: 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[21644:21644:0105/215437.811095:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/ItemListener.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.812685:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/AdjustmentListener.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.814467:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/TextListener.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.816569:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/InputMethodListener.js", source: 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[21644:21644:0105/215437.827560:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/JMenu.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.829720:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/JMenuItem.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.831559:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/AbstractButton.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.834086:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/ItemSelectable.js", source: 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[21644:21644:0105/215437.841575:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSMenuUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.844694:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSMenuItemUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.846570:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSButtonUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.848933:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/event/MenuListener.js", source: 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[21644:21644:0105/215437.859791:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/LazyActionMap.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.862557:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/plaf/ActionMapUIResource.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.863757:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/ActionMap.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.867265:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/plaf/ComponentInputMapUIResource.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.868985:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/ComponentInputMap.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.870933:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/InputMap.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.878046:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/JMenuBar.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.884427:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/DefaultSingleSelectionModel.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.886493:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/SingleSelectionModel.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.888610:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSMenuBarUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.890564:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/DefaultMenuLayout.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.895439:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/BoxLayout.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:37 [21644:21644:0105/215437.897942:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/swing/DefaultLookup.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215437.908528:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/BorderFactory.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215437.910390:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/border/BevelBorder.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215437.935865:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/JCheckBoxMenuItem.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215437.938033:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/JToggleButton.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215437.940392:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSCheckBoxMenuItemUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215437.941941:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSCheckBoxUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215437.943389:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSRadioButtonUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215437.953232:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/gui/APQHandlers.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215437.954833:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/util/MessageManager.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215437.956854:INFO:CONSOLE(17180)] "INFO: Getting messages for lang: en_GB error 05-Jan-2026 21:54:38 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:38 [21644:21644:0105/215437.957457:INFO:CONSOLE(17180)] "JSUtil getting Java resource lang/Messages.properties error 05-Jan-2026 21:54:38 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:38 [21644:21644:0105/215437.957471:INFO:CONSOLE(10504)] "xhr.open binary async=false url=swingjs/j2s/lang/Messages.properties", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:38 [21644:21644:0105/215437.965269:INFO:CONSOLE(17180)] "JSUtil caching 98579 bytes for swingjs/j2s/lang/Messages.properties error 05-Jan-2026 21:54:38 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:38 [21644:21644:0105/215437.997877:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/JSFontMetrics.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215437.999938:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/FontMetrics.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.001679:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/font/FontRenderContext.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.011133:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/KeyStroke.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.014556:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/KeyEvent.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.016872:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/InputEvent.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.018873:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/ComponentEvent.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.037041:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/ToolTipManager.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.039147:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/MouseAdapter.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.040978:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/Timer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.043175:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/MouseMotionAdapter.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.045377:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/ContainerEvent.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.047782:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/JPopupMenu.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.050309:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSPopupMenuUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.053002:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/jquery/JQueryUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.059600:INFO:CONSOLE(17180)] "JSUtil getting Java resource swingjs/jquery/j2sMenu.js error 05-Jan-2026 21:54:38 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.059614:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/jquery/j2sMenu.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.062867:INFO:CONSOLE(17180)] "Processing swingjs/j2s/swingjs/jquery/j2sMenu.js [24845] error 05-Jan-2026 21:54:38 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.062881:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/event/MenuKeyListener.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.064790:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/WindowAdapter.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.070343:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/border/CompoundBorder.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.074009:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/JSeparator.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.076504:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSPopupMenuSeparatorUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.077945:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSSeparatorUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.106885:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/KeyboardManager.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.126430:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/SizeRequirements.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.135038:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/event/ChangeEvent.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.153333:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/gui/JalviewChangeSupport.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.155653:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/Executors.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.157957:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/TimeUnit.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.160167:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/LinkedBlockingQueue.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.161945:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/AbstractQueue.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.163580:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/BlockingQueue.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.165216:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/atomic/AtomicInteger.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.167385:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/locks/ReentrantLock.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.168918:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/locks/Lock.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.170996:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/locks/AbstractQueuedSynchronizer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.172918:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/locks/AbstractOwnableSynchronizer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.174663:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/locks/Condition.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.176422:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/ThreadPoolExecutor.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.178137:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/AbstractExecutorService.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.180441:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/ExecutorService.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.181843:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/Executor.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.183612:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/RejectedExecutionHandler.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.185419:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/ThreadFactory.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.189224:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/Semaphore.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.191310:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/structure/StructureSelectionManager.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.195582:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/JDesktopPane.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.197959:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/JSDesktopPaneUI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.200337:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/DefaultDesktopManager.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.203538:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/swing/DesktopManager.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.208670:INFO:CONSOLE(17180)] "INFO: JALVIEWJS: CREATED DESKTOP error 05-Jan-2026 21:54:38 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.208687:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/bin/JalviewTaskbar.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.210078:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/Taskbar.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.212318:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/plaf/Resizer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.214569:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/api/js/JSFunction.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.229463:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/WindowEvent.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.231529:INFO:CONSOLE(17180)] "loading services error 05-Jan-2026 21:54:38 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.231542:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/client/slivka/SlivkaWSDiscoverer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.233863:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/client/api/AbstractWebServiceDiscoverer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.235779:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/client/api/WebServiceDiscovererI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.237419:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/client/api/WebServiceProviderI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.239226:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/uk/ac/dundee/compbio/slivkaclient/SlivkaClient.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.241397:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/ImmutableCollections.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.249392:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/CompletableFuture.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.260005:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/Future.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.264771:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/CompletionStage.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.267014:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/ForkJoinPool.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.270567:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/misc/Unsafe.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.273061:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/reflect/Field.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.275434:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/ForkJoinTask.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.277809:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/ref/WeakReference.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.279326:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/ref/Reference.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.280986:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/RuntimePermission.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.282842:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/security/BasicPermission.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.284499:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/security/Permission.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.285897:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/security/Guard.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.289405:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/concurrent/CancellationException.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.291742:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/client/ebi/JobDispatcherWSDiscoverer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.298653:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/client/jpred4/JPred4WSDiscoverer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.301941:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/bin/Commands.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.306354:INFO:CONSOLE(17180)] "WARN: Error when running commands error 05-Jan-2026 21:54:38 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.306565:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/io/FileLoader.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.309458:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/bin/JalviewJSApp.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.312580:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/api/JalviewJSApi.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.349193:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javax/net/ssl/HttpsURLConnection.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.352261:INFO:CONSOLE(10504)] "xhr.open binary async=false url=https://www.jalview.org/jalview-js//swingjs/j2s/build_properties", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.373086:INFO:CONSOLE(26)] "Non-fatal exception when checking version at https://www.jalview.org/jalview-js//swingjs/j2s/build_properties: error 05-Jan-2026 21:54:38 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/jalview_bin_Jalview-stderr.html (26) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.373103:INFO:CONSOLE(26)] "java.io.FileNotFoundException: opening https://www.jalview.org/jalview-js//swingjs/j2s/build_properties error 05-Jan-2026 21:54:38 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/jalview_bin_Jalview-stderr.html (26) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.373112:INFO:CONSOLE(26)] "anonymous.anonymous(Unknown Source) error 05-Jan-2026 21:54:38 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/jalview_bin_Jalview-stderr.html (26) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.373503:INFO:CONSOLE(10504)] "xhr.open binary async=false url=https://www.jalview.org/jalview-js//swingjs/j2s/build_properties", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.376887:INFO:CONSOLE(26)] "Non-fatal exception when checking version at https://www.jalview.org/jalview-js//swingjs/j2s/build_properties: error 05-Jan-2026 21:54:38 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/jalview_bin_Jalview-stderr.html (26) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.376920:INFO:CONSOLE(26)] "java.io.FileNotFoundException: opening https://www.jalview.org/jalview-js//swingjs/j2s/build_properties error 05-Jan-2026 21:54:38 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/jalview_bin_Jalview-stderr.html (26) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.376935:INFO:CONSOLE(26)] "anonymous.anonymous(Unknown Source) error 05-Jan-2026 21:54:38 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/jalview_bin_Jalview-stderr.html (26) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.382749:INFO:CONSOLE(17180)] "INFO: Reloading services for jalview.ws2.client.slivka.SlivkaWSDiscoverer error 05-Jan-2026 21:54:38 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.382762:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/ListIterator.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.384830:INFO:CONSOLE(17180)] "INFO: Fetching list of services from https://www.compbio.dundee.ac.uk/slivka/ error 05-Jan-2026 21:54:38 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.385317:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/net/URI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.391463:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/uk/ac/dundee/compbio/slivkaclient/SlivkaClientImpl.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.394863:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javajs/http/HttpClientFactory.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.397185:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javajs/http/SimpleHttpClient.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.399651:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/javajs/http/HttpClient.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.402914:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/StringBuffer.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:38 [21644:21644:0105/215438.405863:INFO:CONSOLE(10504)] "xhr.open binary async=false url=https://www.compbio.dundee.ac.uk/slivka/api/services", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (10504) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.748304:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/io/ByteArrayOutputStream.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.750230:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/io/OutputStream.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.757254:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/org/json/JSONObject.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.759730:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/org/json/JSONTokener.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.761385:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/io/StringReader.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.762728:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/io/Reader.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.764289:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/lang/Readable.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.766202:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/org/json/JSONArray.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.797032:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/uk/ac/dundee/compbio/slivkaclient/Parameter.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.799804:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/uk/ac/dundee/compbio/slivkaclient/SlivkaService.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.805377:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/text/ParsePosition.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.826011:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/api/WebService.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.827909:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/client/slivka/SlivkaParamStoreFactory.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.830032:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws/params/simple/StringParameter.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.832169:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws/params/simple/Option.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.833596:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws/params/OptionI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.834792:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws/params/ArgumentI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.836044:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws/params/ParameterI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.837739:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws/params/simple/BooleanOption.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.839640:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws/params/simple/IntegerParameter.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.841698:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws/params/simple/DoubleParameter.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.844650:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/params/SimpleParamDatastore.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.845663:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws/params/ParamDatastoreI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.847451:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/actions/alignment/AlignmentAction.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.848892:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/actions/BaseAction.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.853222:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/actions/api/ActionI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.854698:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/client/slivka/SlivkaAlignmentWSClient.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.856030:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/client/slivka/SlivkaWSClient.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.857508:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/client/api/WebServiceClientI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.858805:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/client/api/AlignmentWebServiceClientI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.860055:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/actions/alignment/AlignmentProviderI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.861496:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/uk/ac/dundee/compbio/slivkaclient/Job.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.863173:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/api/JobStatus.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.864903:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/api/CredentialType.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.866506:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/actions/annotation/AnnotationAction.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.867805:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/client/slivka/SlivkaAnnotationWSClient.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.869056:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/client/api/AnnotationWebServiceClientI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.871650:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/actions/annotation/AnnotationProviderI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.880201:INFO:CONSOLE(17180)] "INFO: Reloading services for jalview.ws2.client.ebi.JobDispatcherWSDiscoverer error 05-Jan-2026 21:54:39 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.880394:INFO:CONSOLE(17180)] "INFO: Fetching list of services from https://www.ebi.ac.uk/Tools/services/rest/hmmer3_phmmer/ error 05-Jan-2026 21:54:39 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.880603:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/uk/ac/dundee/compbio/hmmerclient/PhmmerClient.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.882804:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/io/github/warownia1/simplehttpclient/HttpClient.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.884163:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/io/github/warownia1/simplehttpclient/impl/JQueryHttpClient.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.886409:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/io/github/warownia1/simplehttpclient/HttpRequest.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.888554:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/io/github/warownia1/simplehttpclient/impl/SimpleHttpRequestBuilder.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.890039:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/io/github/warownia1/simplehttpclient/impl/HttpHeadersBuilder.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.891536:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/TreeMap.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.895412:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/NavigableMap.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.896748:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/SortedMap.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.898293:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/io/github/warownia1/simplehttpclient/impl/EmptyRequestBody.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.899850:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/io/github/warownia1/simplehttpclient/impl/ImmutableHttpRequest.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:39 [21644:21644:0105/215439.901324:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/io/github/warownia1/simplehttpclient/HttpHeaders.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215439.902839:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/TreeSet.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215439.904352:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/NavigableSet.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215439.905619:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/SortedSet.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215439.907585:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/io/github/warownia1/simplehttpclient/HttpResponse.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215439.909653:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/Optional.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215439.917043:INFO:CONSOLE(9663)] "xhr.open async=false url=https://www.ebi.ac.uk/Tools/services/rest/hmmer3_phmmer/?", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.037858:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/nio/charset/StandardCharsets.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.039873:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/nio/charset/Charset.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.041652:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/JSCharSet.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.045277:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/nio/cs/StandardCharsets.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.047886:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/nio/cs/US_ASCII.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.049955:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/nio/cs/HistoricallyNamedCharset.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.052134:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/nio/cs/ISO_8859_1.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.055611:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/nio/cs/UTF_8.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.058410:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/nio/cs/Unicode.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.059892:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/nio/cs/UTF_16BE.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.061862:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/nio/cs/UTF_16LE.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.063225:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/nio/cs/UTF_16.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.065672:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/io/github/warownia1/simplehttpclient/impl/ResponseInfoImpl.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.069608:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/io/github/warownia1/simplehttpclient/impl/SimpleHttpResponse.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.072518:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/client/ebi/ParamStores.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.079282:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/actions/hmmer/PhmmerAction.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.082891:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/client/ebi/PhmmerWSClient.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.086607:INFO:CONSOLE(17180)] "INFO: Reloading services for jalview.ws2.client.jpred4.JPred4WSDiscoverer error 05-Jan-2026 21:54:40 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.086621:INFO:CONSOLE(17180)] "INFO: Fetching list of services from https://www.compbio.dundee.ac.uk/jpred4/ error 05-Jan-2026 21:54:40 ", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (17180) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.086628:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/uk/ac/dundee/compbio/jpred/JPredClient.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.088360:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/actions/secstructpred/SecStructPredAction.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.090079:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/client/jpred4/JPred4WSClient.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.091455:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/client/api/SecStructPredWebServiceClientI.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.093674:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/jalview/ws2/actions/secstructpred/SecStructPredProvider.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.097634:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/uk/ac/dundee/compbio/jpred/JPredRequest.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.113341:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/swingjs/api/js/HTML5CanvasContext2D.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.116108:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/GraphicsCallback.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.117688:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/awt/SunGraphicsCallback.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.131649:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/awt/CausedFocusEvent.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.132383:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/event/FocusEvent.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.134804:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/util/TimSort.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.191294:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/java/awt/SentEvent.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.193845:INFO:CONSOLE(9663)] "xhr.open async=false url=swingjs/j2s/sun/awt/EventQueueItem.js", source: file:///srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site/swingjs/swingjs2.js (9663) error 05-Jan-2026 21:54:40 [21644:21644:0105/215440.379686:WARNING:pref_notifier_impl.cc(41)] Pref observer for media_router.cast_allow_all_ips found at shutdown. build 05-Jan-2026 21:54:40 build 05-Jan-2026 21:54:40 > Task :jalviewjsLaunchTest build 05-Jan-2026 21:54:40 Found line '[21644:21644:0105/215438.208670:INFO:CONSOLE(17180)] "INFO: JALVIEWJS: CREATED DESKTOP' build 05-Jan-2026 21:54:40 :jalviewjsLaunchTest (Thread[Execution worker for ':',5,main]) completed. Took 6.28 secs. build 05-Jan-2026 21:54:40 :jalviewjs (Thread[Execution worker for ':',5,main]) started. build 05-Jan-2026 21:54:40 build 05-Jan-2026 21:54:40 > Task :jalviewjs build 05-Jan-2026 21:54:40 Skipping task ':jalviewjs' as it has no actions. build 05-Jan-2026 21:54:40 :jalviewjs (Thread[Execution worker for ':',5,main]) completed. Took 0.0 secs. build 05-Jan-2026 21:54:40 :jalviewjsSiteTar (Thread[Execution worker for ':',5,main]) started. build 05-Jan-2026 21:54:42 build 05-Jan-2026 21:54:42 > Task :jalviewjsSiteTar build 05-Jan-2026 21:54:42 Execution optimizations have been disabled for task ':jalviewjsSiteTar' to ensure correctness due to the following reasons: build 05-Jan-2026 21:54:42 - Gradle detected a problem with the following location: '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GJB58-JOB1/build/jalviewjs/site'. Reason: Task ':jalviewjsSiteTar' uses this output of task ':jalviewjsCopyStderrLaunchFile' without declaring an explicit or implicit dependency. This can lead to incorrect results being produced, depending on what order the tasks are executed. Please refer to https://docs.gradle.org/7.4.2/userguide/validation_problems.html#implicit_dependency for more details about this problem. build 05-Jan-2026 21:54:42 Invalidating VFS because task ':jalviewjsSiteTar' failed validation build 05-Jan-2026 21:54:42 Caching disabled for task ':jalviewjsSiteTar' because: build 05-Jan-2026 21:54:42 Build cache is disabled build 05-Jan-2026 21:54:42 Task ':jalviewjsSiteTar' is not up-to-date because: build 05-Jan-2026 21:54:42 No history is available. build 05-Jan-2026 21:54:43 :jalviewjsSiteTar (Thread[Execution worker for ':',5,main]) completed. Took 2.595 secs. build 05-Jan-2026 21:54:43 producer locations for task group 1 (Thread[Execution worker for ':',5,main]) started. build 05-Jan-2026 21:54:43 producer locations for task group 1 (Thread[Execution worker for ':',5,main]) completed. Took 0.0 secs. build 05-Jan-2026 21:54:43 producer locations for task group 2 (Thread[Execution worker for ':' Thread 2,5,main]) started. build 05-Jan-2026 21:54:43 producer locations for task group 2 (Thread[Execution worker for ':' Thread 2,5,main]) completed. Took 0.0 secs. build 05-Jan-2026 21:54:43 producer locations for task group 4 (Thread[Execution worker for ':' Thread 2,5,main]) started. build 05-Jan-2026 21:54:43 producer locations for task group 4 (Thread[Execution worker for ':' Thread 2,5,main]) completed. Took 0.0 secs. build 05-Jan-2026 21:54:43 producer locations for task group 3 (Thread[Execution worker for ':',5,main]) started. build 05-Jan-2026 21:54:43 producer locations for task group 3 (Thread[Execution worker for ':',5,main]) completed. Took 0.0 secs. build 05-Jan-2026 21:54:43 build 05-Jan-2026 21:54:43 Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. build 05-Jan-2026 21:54:43 build 05-Jan-2026 21:54:43 You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. build 05-Jan-2026 21:54:43 build 05-Jan-2026 21:54:43 See https://docs.gradle.org/7.4.2/userguide/command_line_interface.html#sec:command_line_warnings build 05-Jan-2026 21:54:43 build 05-Jan-2026 21:54:43 Execution optimizations have been disabled for 3 invalid unit(s) of work during this build to ensure correctness. build 05-Jan-2026 21:54:43 Please consult deprecation warnings for more details. build 05-Jan-2026 21:54:43 build 05-Jan-2026 21:54:43 BUILD SUCCESSFUL in 2m 9s build 05-Jan-2026 21:54:43 29 actionable tasks: 29 executed simple 05-Jan-2026 21:54:43 Finished task 'JalviewJS build site and distributable tar' with result: Success simple 05-Jan-2026 21:54:43 Running post build plugin 'NCover Results Collector' simple 05-Jan-2026 21:54:43 Running post build plugin 'Artifact Copier' simple 05-Jan-2026 21:54:43 Publishing an artifact: JalviewJS site tar file simple 05-Jan-2026 21:54:43 Finished publishing of artifact Shared artifact: [JalviewJS site tar file], pattern: [jalviewjs-site-*.tar.gz] anchored at: [build/distributions/] in 33.08 ms simple 05-Jan-2026 21:54:43 Publishing an artifact: JalviewJS site simple 05-Jan-2026 21:54:44 Finished publishing of artifact Shared artifact: [JalviewJS site], pattern: [**/*] anchored at: [build/jalviewjs/site] in 968.5 ms simple 05-Jan-2026 21:54:44 Running post build plugin 'Artifactory Release Management Staging' simple 05-Jan-2026 21:54:44 Running post build plugin 'Artifactory Build Info Copier' simple 05-Jan-2026 21:54:44 Running post build plugin 'Artifactory Gradle Properties Info Copier' simple 05-Jan-2026 21:54:44 Running post build plugin 'npm Cache Cleanup' simple 05-Jan-2026 21:54:44 Running post build plugin 'Clover Results Collector' simple 05-Jan-2026 21:54:44 Running post build plugin 'Docker Container Cleanup' simple 05-Jan-2026 21:54:44 Finalising the build... simple 05-Jan-2026 21:54:44 Stopping timer. simple 05-Jan-2026 21:54:44 Build JB-GJB58-JOB1-1 completed. simple 05-Jan-2026 21:54:44 Running on server: post build plugin 'NCover Results Collector' simple 05-Jan-2026 21:54:44 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 05-Jan-2026 21:54:44 Running on server: post build plugin 'Clover Delta Calculator' simple 05-Jan-2026 21:54:44 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 05-Jan-2026 21:54:44 All post build plugins have finished simple 05-Jan-2026 21:54:44 Generating build results summary... simple 05-Jan-2026 21:54:44 Saving build results to disk... simple 05-Jan-2026 21:54:44 Logging substituted variables... simple 05-Jan-2026 21:54:44 Indexing build results... simple 05-Jan-2026 21:54:44 Finished building JB-GJB58-JOB1-1.