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Build files
Jalview Builds - Gradle Develop Build - patch-JAL-4410_multimers_from_3dbeacons - Clover and Tests / build / reports / clover / jalview / io
| File | Size | Date | |
|---|---|---|---|
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cache | 26 Mar 2026, 8:10:46 AM | |
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|
exceptions | 26 Mar 2026, 8:10:34 AM | |
|
|
gff | 26 Mar 2026, 8:10:45 AM | |
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packed | 26 Mar 2026, 8:11:02 AM | |
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vamsas | 26 Mar 2026, 8:10:28 AM | |
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vcf | 26 Mar 2026, 8:10:45 AM | |
| A3mFile.html | 58 kB | 26 Mar 2026, 8:10:30 AM | |
| A3mFile.js | 0.9 kB | 26 Mar 2026, 8:10:30 AM | |
| AMSAFile.html | 80 kB | 26 Mar 2026, 8:10:29 AM | |
| AMSAFile.js | 1 kB | 26 Mar 2026, 8:10:29 AM | |
| AlignFile.html | 705 kB | 26 Mar 2026, 8:10:30 AM | |
| AlignFile.js | 222 kB | 26 Mar 2026, 8:10:30 AM | |
| AlignmentFileReaderI.html | 36 kB | 26 Mar 2026, 8:10:29 AM | |
| AlignmentFileReaderI.js | 0.6 kB | 26 Mar 2026, 8:10:29 AM | |
| AlignmentFileWriterI.html | 34 kB | 26 Mar 2026, 8:10:30 AM | |
| AlignmentFileWriterI.js | 0.6 kB | 26 Mar 2026, 8:10:30 AM | |
| AlignmentProperties.html | 94 kB | 26 Mar 2026, 8:10:29 AM | |
| AlignmentProperties.js | 1 kB | 26 Mar 2026, 8:10:29 AM | |
| AnnotatedPDBFileInputTest.html | 166 kB | 26 Mar 2026, 8:10:32 AM | |
| AnnotatedPDBFileInputTest.js | 3 kB | 26 Mar 2026, 8:10:32 AM | |
| AnnotatedPDBFileInputTest_checkAnnotationWiring_eo.html | 14 kB | 26 Mar 2026, 8:10:32 AM | |
| AnnotatedPDBFileInputTest_checkNoDuplicates_1ca.html | 19 kB | 26 Mar 2026, 8:10:32 AM | |
| AnnotatedPDBFileInputTest_checkPDBSequenceFeatures_12l.html | 12 kB | 26 Mar 2026, 8:10:32 AM | |
| AnnotatedPDBFileInputTest_testJalviewProjectRelocationAnnotation_x9.html | 164 kB | 26 Mar 2026, 8:10:32 AM | |
| AnnotationExporterTest.html | 59 kB | 26 Mar 2026, 8:10:31 AM | |
| AnnotationExporterTest.js | 1 kB | 26 Mar 2026, 8:10:31 AM | |
| AnnotationExporterTest_testAnnotationExportAsCSV_1c9.html | 110 kB | 26 Mar 2026, 8:10:31 AM | |
| AnnotationFile.html | 1.01 MB | 26 Mar 2026, 8:10:29 AM | |
| AnnotationFile.js | 59 kB | 26 Mar 2026, 8:10:29 AM | |
| AnnotationFileIOTest.html | 241 kB | 26 Mar 2026, 8:10:32 AM | |
| AnnotationFileIOTest.js | 5 kB | 26 Mar 2026, 8:10:32 AM | |
| AnnotationFileIOTest_exampleAnnotationFileIO_ij.html | 40 kB | 26 Mar 2026, 8:10:32 AM | |
| AnnotationFileIOTest_testAnnotateAlignmentView_gq.html | 110 kB | 26 Mar 2026, 8:10:32 AM | |
| AnnotationFileIOTest_testCalcIdRestore_j2.html | 110 kB | 26 Mar 2026, 8:10:32 AM | |
| AnnotationFileIOTest_testProviderRestore_1f.html | 110 kB | 26 Mar 2026, 8:10:32 AM | |
| AppletFormatAdapter.html | 679 kB | 26 Mar 2026, 8:10:29 AM | |
| AppletFormatAdapter.js | 129 kB | 26 Mar 2026, 8:10:29 AM | |
| BLCFile.html | 153 kB | 26 Mar 2026, 8:10:30 AM | |
| BLCFile.js | 3 kB | 26 Mar 2026, 8:10:30 AM | |
| BackupFilenameFilter.html | 68 kB | 26 Mar 2026, 8:10:29 AM | |
| BackupFilenameFilter.js | 3 kB | 26 Mar 2026, 8:10:29 AM | |
| BackupFilenameParts.html | 129 kB | 26 Mar 2026, 8:10:29 AM | |
| BackupFilenameParts.js | 7 kB | 26 Mar 2026, 8:10:29 AM | |
| BackupFiles.html | 600 kB | 26 Mar 2026, 8:10:29 AM | |
| BackupFiles.js | 59 kB | 26 Mar 2026, 8:10:29 AM | |
| BackupFilesPresetEntry.html | 155 kB | 26 Mar 2026, 8:10:29 AM | |
| BackupFilesPresetEntry.js | 15 kB | 26 Mar 2026, 8:10:29 AM | |
| BackupFilesTest.html | 296 kB | 26 Mar 2026, 8:10:32 AM | |
| BackupFilesTest.js | 10 kB | 26 Mar 2026, 8:10:32 AM | |
| BackupFilesTest_backupsEnabledNoRollMaxTest_l9.html | 109 kB | 26 Mar 2026, 8:10:32 AM | |
| BackupFilesTest_backupsEnabledReverseRollMaxTest_db.html | 102 kB | 26 Mar 2026, 8:10:32 AM | |
| BackupFilesTest_backupsEnabledRollMaxTest_11d.html | 109 kB | 26 Mar 2026, 8:10:32 AM | |
| BackupFilesTest_backupsEnabledSingleFileBackupTest_10s.html | 109 kB | 26 Mar 2026, 8:10:32 AM | |
| BackupFilesTest_noBackupsEnabledTest_re.html | 109 kB | 26 Mar 2026, 8:10:32 AM | |
| BioJsHTMLOutput.html | 278 kB | 26 Mar 2026, 8:10:30 AM | |
| BioJsHTMLOutput.js | 73 kB | 26 Mar 2026, 8:10:30 AM | |
| BioJsHTMLOutputTest.html | 107 kB | 26 Mar 2026, 8:10:30 AM | |
| BioJsHTMLOutputTest.js | 2 kB | 26 Mar 2026, 8:10:30 AM | |
| BioJsHTMLOutputTest_expectedNullPointerException_qz.html | 8 kB | 26 Mar 2026, 8:10:30 AM | |
| BioJsHTMLOutputTest_getBioJsMSAVersions_a5.html | 8 kB | 26 Mar 2026, 8:10:30 AM | |
| BioJsHTMLOutputTest_getJalviewAlignmentAsJsonString_dx.html | 23 kB | 26 Mar 2026, 8:10:30 AM | |
| ClustalFile.html | 158 kB | 26 Mar 2026, 8:10:30 AM | |
| ClustalFile.js | 6 kB | 26 Mar 2026, 8:10:30 AM | |
| ClustalFileTest.html | 65 kB | 26 Mar 2026, 8:10:32 AM | |
| ClustalFileTest.js | 1 kB | 26 Mar 2026, 8:10:32 AM | |
| ClustalFileTest_testParse_noNumbering_195.html | 14 kB | 26 Mar 2026, 8:10:32 AM | |
| ClustalFileTest_testParse_withNumbering_fe.html | 14 kB | 26 Mar 2026, 8:10:32 AM | |
| CrossRef2xmlTests.html | 327 kB | 26 Mar 2026, 8:10:30 AM | |
| CrossRef2xmlTests.js | 4 kB | 26 Mar 2026, 8:10:30 AM | |
| CrossRef2xmlTests_openCrossrefsForEnsemblTwice_k2.html | 185 kB | 26 Mar 2026, 8:10:30 AM | |
| DBRefFile.html | 43 kB | 26 Mar 2026, 8:10:30 AM | |
| DBRefFile.js | 0.6 kB | 26 Mar 2026, 8:10:30 AM | |
| DataSourceType.html | 269 kB | 26 Mar 2026, 8:10:29 AM | |
| DataSourceType.js | 25 kB | 26 Mar 2026, 8:10:29 AM | |
| EMBLLikeFlatFile.html | 429 kB | 26 Mar 2026, 8:10:29 AM | |
| EMBLLikeFlatFile.js | 17 kB | 26 Mar 2026, 8:10:29 AM | |
| EmblFlatFile.html | 134 kB | 26 Mar 2026, 8:10:29 AM | |
| EmblFlatFile.js | 4 kB | 26 Mar 2026, 8:10:29 AM | |
| EmblFlatFileTest.html | 229 kB | 26 Mar 2026, 8:10:32 AM | |
| EmblFlatFileTest.js | 5 kB | 26 Mar 2026, 8:10:32 AM | |
| EmblFlatFileTest_testAdjustForProteinLength_j6.html | 12 kB | 26 Mar 2026, 8:10:32 AM | |
| EmblFlatFileTest_testParseToRNA_14k.html | 23 kB | 26 Mar 2026, 8:10:32 AM | |
| EmblFlatFileTest_testParse_codonStartNot1_jv.html | 11 kB | 26 Mar 2026, 8:10:32 AM | |
| EmblFlatFileTest_testParse_noUniprotXref_3z.html | 22 kB | 26 Mar 2026, 8:10:32 AM | |
| EmblFlatFileTest_testParse_r9.html | 23 kB | 26 Mar 2026, 8:10:32 AM | |
| EmblFlatFileTest_testRemoveQuotes_49.html | 12 kB | 26 Mar 2026, 8:10:32 AM | |
| FastaFile.html | 427 kB | 26 Mar 2026, 8:10:30 AM | |
| FastaFile.js | 111 kB | 26 Mar 2026, 8:10:30 AM | |
| FeaturesFile.html | 765 kB | 26 Mar 2026, 8:10:29 AM | |
| FeaturesFile.js | 27 kB | 26 Mar 2026, 8:10:29 AM | |
| FeaturesFileTest.html | 522 kB | 26 Mar 2026, 8:10:32 AM | |
| FeaturesFileTest.js | 13 kB | 26 Mar 2026, 8:10:32 AM | |
| FeaturesFileTest_readGff3File_3f.html | 39 kB | 26 Mar 2026, 8:10:32 AM | |
| FeaturesFileTest_simpleGff3FileClass_c0.html | 36 kB | 26 Mar 2026, 8:10:32 AM | |
| FeaturesFileTest_simpleGff3FileLoader_fs.html | 130 kB | 26 Mar 2026, 8:10:32 AM | |
| FeaturesFileTest_simpleGff3RelaxedIdMatching_59.html | 37 kB | 26 Mar 2026, 8:10:32 AM | |
| FeaturesFileTest_testOutputFeatureFilters_r6.html | 17 kB | 26 Mar 2026, 8:10:32 AM | |
| FeaturesFileTest_testParseFilters_oz.html | 18 kB | 26 Mar 2026, 8:10:32 AM | |
| FeaturesFileTest_testParse_14.html | 107 kB | 26 Mar 2026, 8:10:32 AM | |
| FeaturesFileTest_testParse_jalviewFeaturesOnly_167.html | 113 kB | 26 Mar 2026, 8:10:32 AM | |
| FeaturesFileTest_testParse_mixedJalviewGff_17d.html | 99 kB | 26 Mar 2026, 8:10:32 AM | |
| FeaturesFileTest_testParse_pureGff3_27.html | 110 kB | 26 Mar 2026, 8:10:32 AM | |
| FeaturesFileTest_testPrintGffFormat_15e.html | 97 kB | 26 Mar 2026, 8:10:32 AM | |
| FeaturesFileTest_testPrintGffFormat_withFilters_1a8.html | 117 kB | 26 Mar 2026, 8:10:32 AM | |
| FeaturesFileTest_testPrintJalviewFormat_127.html | 113 kB | 26 Mar 2026, 8:10:32 AM | |
| FeaturesFileTest_testPrintJalviewFormat_withFilters_ke.html | 109 kB | 26 Mar 2026, 8:10:32 AM | |
| FileFormat.html | 861 kB | 26 Mar 2026, 8:10:30 AM | |
| FileFormat.js | 86 kB | 26 Mar 2026, 8:10:30 AM | |
| FileFormatException.html | 58 kB | 26 Mar 2026, 8:10:30 AM | |
| FileFormatException.js | 2 kB | 26 Mar 2026, 8:10:30 AM | |
| FileFormatI.html | 47 kB | 26 Mar 2026, 8:10:29 AM | |
| FileFormatI.js | 0.7 kB | 26 Mar 2026, 8:10:29 AM | |
| FileFormats.html | 504 kB | 26 Mar 2026, 8:10:29 AM | |
| FileFormats.js | 76 kB | 26 Mar 2026, 8:10:29 AM | |
| FileFormatsTest.html | 137 kB | 26 Mar 2026, 8:10:32 AM | |
| FileFormatsTest.js | 3 kB | 26 Mar 2026, 8:10:32 AM | |
| FileFormatsTest_testDeregisterFileFormat_f.html | 9 kB | 26 Mar 2026, 8:10:32 AM | |
| FileFormatsTest_testForName_1d.html | 9 kB | 26 Mar 2026, 8:10:32 AM | |
| FileFormatsTest_testGetFormats_v7.html | 9 kB | 26 Mar 2026, 8:10:32 AM | |
| FileFormatsTest_testGetReadableFormats_v3.html | 9 kB | 26 Mar 2026, 8:10:32 AM | |
| FileFormatsTest_testGetWritableFormats_17g.html | 9 kB | 26 Mar 2026, 8:10:32 AM | |
| FileFormatsTest_testIsIdentifiable_l5.html | 9 kB | 26 Mar 2026, 8:10:32 AM | |
| FileFormatsTest_testRegisterFileFormat_vp.html | 9 kB | 26 Mar 2026, 8:10:32 AM | |
| FileIOTester.html | 130 kB | 26 Mar 2026, 8:10:32 AM | |
| FileIOTester.js | 3 kB | 26 Mar 2026, 8:10:32 AM | |
| FileIOTester_testGzipIo_12g.html | 13 kB | 26 Mar 2026, 8:10:32 AM | |
| FileIOTester_testGziplocalFileIO_gs.html | 11 kB | 26 Mar 2026, 8:10:32 AM | |
| FileIOTester_testIsGzipInputStream_6q.html | 12 kB | 26 Mar 2026, 8:10:32 AM | |
| FileIOTester_testNonGzipURLIO_19b.html | 12 kB | 26 Mar 2026, 8:10:32 AM | |
| FileIOTester_testNonGziplocalFileIO_v1.html | 11 kB | 26 Mar 2026, 8:10:32 AM | |
| FileIOTester_testStarsInFasta1_bw.html | 11 kB | 26 Mar 2026, 8:10:32 AM | |
| FileIOTester_testStarsInFasta2_h2.html | 11 kB | 26 Mar 2026, 8:10:32 AM | |
| FileLoader.html | 601 kB | 26 Mar 2026, 8:10:30 AM | |
| FileLoader.js | 250 kB | 26 Mar 2026, 8:10:30 AM | |
| FileLoaderTest.html | 37 kB | 26 Mar 2026, 8:10:32 AM | |
| FileLoaderTest.js | 0.6 kB | 26 Mar 2026, 8:10:32 AM | |
| FileParse.html | 925 kB | 26 Mar 2026, 8:10:29 AM | |
| FileParse.js | 337 kB | 26 Mar 2026, 8:10:29 AM | |
| FormatAdapter.html | 457 kB | 26 Mar 2026, 8:10:29 AM | |
| FormatAdapter.js | 55 kB | 26 Mar 2026, 8:10:29 AM | |
| FormatAdapterTest.html | 112 kB | 26 Mar 2026, 8:10:31 AM | |
| FormatAdapterTest.js | 5 kB | 26 Mar 2026, 8:10:31 AM | |
| FormatAdapterTest_testRoundTrip_133.html | 31 kB | 26 Mar 2026, 8:10:31 AM | |
| FormatAdapterTest_testRoundTrip_17q.html | 22 kB | 26 Mar 2026, 8:10:31 AM | |
| FormatAdapterTest_testRoundTrip_1c1.html | 24 kB | 26 Mar 2026, 8:10:31 AM | |
| FormatAdapterTest_testRoundTrip_1d5.html | 23 kB | 26 Mar 2026, 8:10:31 AM | |
| FormatAdapterTest_testRoundTrip_4q.html | 21 kB | 26 Mar 2026, 8:10:31 AM | |
| FormatAdapterTest_testRoundTrip_5u.html | 21 kB | 26 Mar 2026, 8:10:31 AM | |
| FormatAdapterTest_testRoundTrip_8i.html | 22 kB | 26 Mar 2026, 8:10:31 AM | |
| FormatAdapterTest_testRoundTrip_b7.html | 22 kB | 26 Mar 2026, 8:10:31 AM | |
| FormatAdapterTest_testRoundTrip_e3.html | 21 kB | 26 Mar 2026, 8:10:31 AM | |
| FormatAdapterTest_testRoundTrip_ky.html | 42 kB | 26 Mar 2026, 8:10:31 AM | |
| FormatAdapterTest_testRoundTrip_tj.html | 21 kB | 26 Mar 2026, 8:10:31 AM | |
| GenBankFile.html | 121 kB | 26 Mar 2026, 8:10:29 AM | |
| GenBankFile.js | 2 kB | 26 Mar 2026, 8:10:29 AM | |
| GenBankFileTest.html | 132 kB | 26 Mar 2026, 8:10:31 AM | |
| GenBankFileTest.js | 3 kB | 26 Mar 2026, 8:10:31 AM | |
| GenBankFileTest_testParse_8p.html | 20 kB | 26 Mar 2026, 8:10:31 AM | |
| HTMLOutput.html | 197 kB | 26 Mar 2026, 8:10:30 AM | |
| HTMLOutput.js | 2 kB | 26 Mar 2026, 8:10:30 AM | |
| HtmlFile.html | 132 kB | 26 Mar 2026, 8:10:30 AM | |
| HtmlFile.js | 2 kB | 26 Mar 2026, 8:10:30 AM | |
| HtmlFileTest.html | 39 kB | 26 Mar 2026, 8:10:32 AM | |
| HtmlFileTest.js | 0.6 kB | 26 Mar 2026, 8:10:32 AM | |
| HtmlSvgOutput.html | 173 kB | 26 Mar 2026, 8:10:29 AM | |
| HtmlSvgOutput.js | 2 kB | 26 Mar 2026, 8:10:29 AM | |
| IdentifyFile.html | 590 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFile.js | 237 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest.html | 149 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest.js | 5 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_11q.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_12i.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_158.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_15c.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_15r.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_169.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_18c.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_3b.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_7d.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_7y.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_ap.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_be.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_f1.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_featureFile_1d0.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_hh.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_jb.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_jw.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_kc.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_kr.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_mg.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_p8.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testIdentify_ui.html | 11 kB | 26 Mar 2026, 8:10:30 AM | |
| IdentifyFileTest_testLooksLikeFeatureData_1a0.html | 8 kB | 26 Mar 2026, 8:10:30 AM | |
| InputStreamParser.html | 44 kB | 26 Mar 2026, 8:10:30 AM | |
| InputStreamParser.js | 0.6 kB | 26 Mar 2026, 8:10:30 AM | |
| IntKeyStringValueEntry.html | 44 kB | 26 Mar 2026, 8:10:30 AM | |
| IntKeyStringValueEntry.js | 0.7 kB | 26 Mar 2026, 8:10:30 AM | |
| JPredFile.html | 220 kB | 26 Mar 2026, 8:10:30 AM | |
| JPredFile.js | 2 kB | 26 Mar 2026, 8:10:30 AM | |
| JSONFile.html | 508 kB | 26 Mar 2026, 8:10:29 AM | |
| JSONFile.js | 14 kB | 26 Mar 2026, 8:10:29 AM | |
| JSONFileTest.html | 364 kB | 26 Mar 2026, 8:10:31 AM | |
| JSONFileTest.js | 6 kB | 26 Mar 2026, 8:10:31 AM | |
| JSONFileTest_colorSchemeTest_vo.html | 8 kB | 26 Mar 2026, 8:10:31 AM | |
| JSONFileTest_hiddenColsTest_33.html | 10 kB | 26 Mar 2026, 8:10:31 AM | |
| JSONFileTest_hiddenSeqsTest_3e.html | 8 kB | 26 Mar 2026, 8:10:31 AM | |
| JSONFileTest_isShowSeqFeaturesSet_76.html | 8 kB | 26 Mar 2026, 8:10:31 AM | |
| JSONFileTest_roundTripTest_om.html | 7 kB | 26 Mar 2026, 8:10:31 AM | |
| JSONFileTest_testAnnotationParsed_16u.html | 8 kB | 26 Mar 2026, 8:10:31 AM | |
| JSONFileTest_testBioJSONRoundTripWithColourSchemeNone_i2.html | 105 kB | 26 Mar 2026, 8:10:31 AM | |
| JSONFileTest_testGrpParsed_13q.html | 10 kB | 26 Mar 2026, 8:10:31 AM | |
| JSONFileTest_testGrpParsed_colourNone_e2.html | 117 kB | 26 Mar 2026, 8:10:31 AM | |
| JSONFileTest_testSeqParsed_35.html | 12 kB | 26 Mar 2026, 8:10:31 AM | |
| Jalview2xmlBase.html | 78 kB | 26 Mar 2026, 8:10:31 AM | |
| Jalview2xmlBase.js | 1 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewExportPropertiesTests.html | 71 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewExportPropertiesTests.js | 1 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewExportPropertiesTests_testImportExportPeriodGaps_1dh.html | 136 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileChooser.html | 646 kB | 26 Mar 2026, 8:10:29 AM | |
| JalviewFileChooser.js | 136 kB | 26 Mar 2026, 8:10:29 AM | |
| JalviewFileChooserTest.html | 106 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileChooserTest.js | 6 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_10y.html | 11 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_11o.html | 11 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_12.html | 11 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_18b.html | 11 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_1a5.html | 10 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_1c8.html | 11 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_2u.html | 10 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_37.html | 10 kB | 26 Mar 2026, 8:10:32 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_3n.html | 10 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_44.html | 10 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_a4.html | 11 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_ck.html | 12 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_lh.html | 10 kB | 26 Mar 2026, 8:10:32 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_oa.html | 11 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_qf.html | 11 kB | 26 Mar 2026, 8:10:32 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_s.html | 10 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_uq.html | 11 kB | 26 Mar 2026, 8:10:32 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_y.html | 11 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_zk.html | 11 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileFilter.html | 245 kB | 26 Mar 2026, 8:10:30 AM | |
| JalviewFileFilter.js | 63 kB | 26 Mar 2026, 8:10:30 AM | |
| JalviewFileView.html | 115 kB | 26 Mar 2026, 8:10:29 AM | |
| JalviewFileView.js | 2 kB | 26 Mar 2026, 8:10:29 AM | |
| JalviewFileViewTest.html | 90 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileViewTest.js | 2 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileViewTest_testGetExtension_ro.html | 8 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileViewTest_testGetImageIcon_t4.html | 13 kB | 26 Mar 2026, 8:10:31 AM | |
| JalviewFileViewTest_testGetTypeDescription_8s.html | 10 kB | 26 Mar 2026, 8:10:31 AM | |
| JnetAnnotationMaker.html | 126 kB | 26 Mar 2026, 8:10:29 AM | |
| JnetAnnotationMaker.js | 1 kB | 26 Mar 2026, 8:10:29 AM | |
| MSFfile.html | 212 kB | 26 Mar 2026, 8:10:30 AM | |
| MSFfile.js | 5 kB | 26 Mar 2026, 8:10:30 AM | |
| ModellerDescription.html | 236 kB | 26 Mar 2026, 8:10:29 AM | |
| ModellerDescription.js | 3 kB | 26 Mar 2026, 8:10:29 AM | |
| NewickFile.html | 529 kB | 26 Mar 2026, 8:10:30 AM | |
| NewickFile.js | 39 kB | 26 Mar 2026, 8:10:30 AM | |
| NewickFileTests.html | 121 kB | 26 Mar 2026, 8:10:31 AM | |
| NewickFileTests.js | 3 kB | 26 Mar 2026, 8:10:31 AM | |
| NewickFileTests_testTreeIO_11u.html | 34 kB | 26 Mar 2026, 8:10:31 AM | |
| NewickFileTests_testTreeIO_12n.html | 35 kB | 26 Mar 2026, 8:10:31 AM | |
| NewickFileTests_testTreeIO_kx.html | 33 kB | 26 Mar 2026, 8:10:31 AM | |
| PContactPredictionFile.html | 101 kB | 26 Mar 2026, 8:10:29 AM | |
| PContactPredictionFile.js | 1 kB | 26 Mar 2026, 8:10:29 AM | |
| PDBFeatureSettings.html | 121 kB | 26 Mar 2026, 8:10:30 AM | |
| PDBFeatureSettings.js | 8 kB | 26 Mar 2026, 8:10:30 AM | |
| PIRFile.html | 120 kB | 26 Mar 2026, 8:10:29 AM | |
| PIRFile.js | 2 kB | 26 Mar 2026, 8:10:29 AM | |
| PfamFile.html | 131 kB | 26 Mar 2026, 8:10:29 AM | |
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| PfamFormatInputTest.html | 56 kB | 26 Mar 2026, 8:10:32 AM | |
| PfamFormatInputTest.js | 1.0 kB | 26 Mar 2026, 8:10:32 AM | |
| PfamFormatInputTest_testPfamFormatNoLimits_88.html | 21 kB | 26 Mar 2026, 8:10:32 AM | |
| PfamFormatInputTest_testPfamFormatValidLimits_jp.html | 21 kB | 26 Mar 2026, 8:10:32 AM | |
| PhylipFile.html | 176 kB | 26 Mar 2026, 8:10:29 AM | |
| PhylipFile.js | 6 kB | 26 Mar 2026, 8:10:29 AM | |
| PhylipFileTests.html | 128 kB | 26 Mar 2026, 8:10:30 AM | |
| PhylipFileTests.js | 3 kB | 26 Mar 2026, 8:10:30 AM | |
| PhylipFileTests_testInterleavedDataExtraction_17n.html | 25 kB | 26 Mar 2026, 8:10:30 AM | |
| PhylipFileTests_testInterleavedIO_e7.html | 58 kB | 26 Mar 2026, 8:10:30 AM | |
| PhylipFileTests_testSequentialDataExtraction_15l.html | 42 kB | 26 Mar 2026, 8:10:30 AM | |
| PhylipFileTests_testSequentialIO_u.html | 49 kB | 26 Mar 2026, 8:10:30 AM | |
| PileUpfile.html | 112 kB | 26 Mar 2026, 8:10:29 AM | |
| PileUpfile.js | 2 kB | 26 Mar 2026, 8:10:29 AM | |
| RNAMLfileTest.html | 66 kB | 26 Mar 2026, 8:10:32 AM | |
| RNAMLfileTest.js | 1 kB | 26 Mar 2026, 8:10:32 AM | |
| RNAMLfileTest_testRnamlSeqImport_1t.html | 39 kB | 26 Mar 2026, 8:10:32 AM | |
| RNAMLfileTest_testRnamlToStockholmIO_eq.html | 55 kB | 26 Mar 2026, 8:10:32 AM | |
| RnamlFile.html | 145 kB | 26 Mar 2026, 8:10:29 AM | |
| RnamlFile.js | 3 kB | 26 Mar 2026, 8:10:29 AM | |
| ScoreMatrixFile.html | 266 kB | 26 Mar 2026, 8:10:30 AM | |
| ScoreMatrixFile.js | 24 kB | 26 Mar 2026, 8:10:30 AM | |
| ScoreMatrixFileTest.html | 334 kB | 26 Mar 2026, 8:10:30 AM | |
| ScoreMatrixFileTest.js | 7 kB | 26 Mar 2026, 8:10:30 AM | |
| ScoreMatrixFileTest_testParseMatrix_aaIndexBlosum80_8o.html | 11 kB | 26 Mar 2026, 8:10:31 AM | |
| ScoreMatrixFileTest_testParseMatrix_aaindexFormat_2d.html | 11 kB | 26 Mar 2026, 8:10:31 AM | |
| ScoreMatrixFileTest_testParseMatrix_aaindex_extraDataLines_61.html | 12 kB | 26 Mar 2026, 8:10:31 AM | |
| ScoreMatrixFileTest_testParseMatrix_aaindex_mMissing_54.html | 13 kB | 26 Mar 2026, 8:10:31 AM | |
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| ScoreMatrixFileTest_testParseMatrix_aaindex_tooFewColumns_it.html | 22 kB | 26 Mar 2026, 8:10:31 AM | |
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| SequenceAnnotationReport.html | 631 kB | 26 Mar 2026, 8:10:29 AM | |
| SequenceAnnotationReport.js | 41 kB | 26 Mar 2026, 8:10:29 AM | |
| SequenceAnnotationReportTest.html | 309 kB | 26 Mar 2026, 8:10:31 AM | |
| SequenceAnnotationReportTest.js | 7 kB | 26 Mar 2026, 8:10:31 AM | |
| SequenceAnnotationReportTest_testAppendFeature_DescEqualsType_gv.html | 10 kB | 26 Mar 2026, 8:10:31 AM | |
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| SequenceAnnotationReportTest_testAppendFeature_disulfideBond_bj.html | 9 kB | 26 Mar 2026, 8:10:31 AM | |
| SequenceAnnotationReportTest_testAppendFeature_noScore_vz.html | 10 kB | 26 Mar 2026, 8:10:31 AM | |
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| SequenceAnnotationReportTest_testCreateSequenceAnnotationReport_withEllipsis_fu.html | 14 kB | 26 Mar 2026, 8:10:31 AM | |
| SimpleBlastFile.html | 152 kB | 26 Mar 2026, 8:10:29 AM | |
| SimpleBlastFile.js | 2 kB | 26 Mar 2026, 8:10:29 AM | |
| StockholmFile.html | 675 kB | 26 Mar 2026, 8:10:29 AM | |
| StockholmFile.js | 60 kB | 26 Mar 2026, 8:10:29 AM | |
| StockholmFileTest.html | 515 kB | 26 Mar 2026, 8:10:30 AM | |
| StockholmFileTest.js | 20 kB | 26 Mar 2026, 8:10:30 AM | |
| StockholmFileTest_curlyWUSSsecondaryStructureForRNASequence_a8.html | 75 kB | 26 Mar 2026, 8:10:30 AM | |
| StockholmFileTest_dbrefOutput_6o.html | 42 kB | 26 Mar 2026, 8:10:30 AM | |
| StockholmFileTest_descriptionLineOutput_81.html | 39 kB | 26 Mar 2026, 8:10:30 AM | |
| StockholmFileTest_detectWussBrackets_199.html | 7 kB | 26 Mar 2026, 8:10:30 AM | |
| StockholmFileTest_fullWUSSsecondaryStructureForRNASequence_uj.html | 49 kB | 26 Mar 2026, 8:10:30 AM | |
| StockholmFileTest_pfamFileDataExtraction_gl.html | 46 kB | 26 Mar 2026, 8:10:30 AM | |
| StockholmFileTest_pfamFileIO_qc.html | 48 kB | 26 Mar 2026, 8:10:30 AM | |
| StockholmFileTest_rfamFileIO_83.html | 52 kB | 26 Mar 2026, 8:10:30 AM | |
| StockholmFileTest_secondaryStructureForRNASequence_12h.html | 49 kB | 26 Mar 2026, 8:10:30 AM | |
| StockholmFileTest_stockholmFileRnaSSAlphaChars_105.html | 46 kB | 26 Mar 2026, 8:10:30 AM | |
| StockholmFileTest_stockholmFileRnaSSSpaceChars_19t.html | 27 kB | 26 Mar 2026, 8:10:30 AM | |
| StockholmFileTest_testAnnotationEquivalence_2f.html | 12 kB | 26 Mar 2026, 8:10:30 AM | |
| StructureFile.html | 445 kB | 26 Mar 2026, 8:10:29 AM | |
| StructureFile.js | 97 kB | 26 Mar 2026, 8:10:29 AM | |
| TCoffeeScoreFile.html | 362 kB | 26 Mar 2026, 8:10:29 AM | |
| TCoffeeScoreFile.js | 14 kB | 26 Mar 2026, 8:10:29 AM | |
| TCoffeeScoreFileTest.html | 171 kB | 26 Mar 2026, 8:10:32 AM | |
| TCoffeeScoreFileTest.js | 3 kB | 26 Mar 2026, 8:10:32 AM | |
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| TCoffeeScoreFileTest_testWrongFile_y3.html | 10 kB | 26 Mar 2026, 8:10:32 AM | |
| VamsasAppDatastore.html | 1.26 MB | 26 Mar 2026, 8:10:29 AM | |
| VamsasAppDatastore.js | 13 kB | 26 Mar 2026, 8:10:29 AM | |
| WSWUBlastClient.html | 177 kB | 26 Mar 2026, 8:10:29 AM | |
| WSWUBlastClient.js | 2 kB | 26 Mar 2026, 8:10:29 AM | |
| WindowsFileLoadAndSaveTest.html | 66 kB | 26 Mar 2026, 8:10:32 AM | |
| WindowsFileLoadAndSaveTest.js | 1 kB | 26 Mar 2026, 8:10:32 AM | |
| WindowsFileLoadAndSaveTest_loadAndSaveAlignment_1aw.html | 110 kB | 26 Mar 2026, 8:10:32 AM | |
| pkg-summary.html | 86 kB | 26 Mar 2026, 8:10:32 AM | |
| quick-wins.html | 32 kB | 26 Mar 2026, 8:10:32 AM | |
| test-AnnotatedPDBFileInputTest.html | 10 kB | 26 Mar 2026, 8:10:18 AM | |
| test-AnnotationExporterTest.html | 9 kB | 26 Mar 2026, 8:10:18 AM | |
| test-AnnotationFileIOTest.html | 10 kB | 26 Mar 2026, 8:10:18 AM | |
| test-BackupFilesTest.html | 11 kB | 26 Mar 2026, 8:10:18 AM | |
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| test-ClustalFileTest.html | 9 kB | 26 Mar 2026, 8:10:18 AM | |
| test-CrossRef2xmlTests.html | 9 kB | 26 Mar 2026, 8:10:18 AM | |
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| test-PfamFormatInputTest.html | 9 kB | 26 Mar 2026, 8:10:18 AM | |
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| test-RNAMLfileTest.html | 9 kB | 26 Mar 2026, 8:10:18 AM | |
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| top-risks.html | 33 kB | 26 Mar 2026, 8:10:32 AM |