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Build files
Jalview Builds - Gradle Develop Build - bug-JAL-4604_new_getdown-launcher_jar_and_buggy_arguments_detection - Clover and Tests / build / reports / clover / jalview / io
| File | Size | Date | |
|---|---|---|---|
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cache | 05 Nov 2025, 1:26:12 PM | |
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|
exceptions | 05 Nov 2025, 1:25:58 PM | |
|
|
gff | 05 Nov 2025, 1:26:12 PM | |
|
|
packed | 05 Nov 2025, 1:26:31 PM | |
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vamsas | 05 Nov 2025, 1:25:51 PM | |
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vcf | 05 Nov 2025, 1:26:11 PM | |
| AMSAFile.html | 80 kB | 05 Nov 2025, 1:25:53 PM | |
| AMSAFile.js | 1 kB | 05 Nov 2025, 1:25:53 PM | |
| AlignFile.html | 706 kB | 05 Nov 2025, 1:25:53 PM | |
| AlignFile.js | 222 kB | 05 Nov 2025, 1:25:53 PM | |
| AlignmentFileReaderI.html | 36 kB | 05 Nov 2025, 1:25:52 PM | |
| AlignmentFileReaderI.js | 0.6 kB | 05 Nov 2025, 1:25:52 PM | |
| AlignmentFileWriterI.html | 34 kB | 05 Nov 2025, 1:25:53 PM | |
| AlignmentFileWriterI.js | 0.6 kB | 05 Nov 2025, 1:25:53 PM | |
| AlignmentProperties.html | 94 kB | 05 Nov 2025, 1:25:52 PM | |
| AlignmentProperties.js | 1 kB | 05 Nov 2025, 1:25:52 PM | |
| AnnotatedPDBFileInputTest.html | 166 kB | 05 Nov 2025, 1:25:56 PM | |
| AnnotatedPDBFileInputTest.js | 3 kB | 05 Nov 2025, 1:25:56 PM | |
| AnnotatedPDBFileInputTest_checkAnnotationWiring_9q.html | 24 kB | 05 Nov 2025, 1:25:56 PM | |
| AnnotatedPDBFileInputTest_checkNoDuplicates_tt.html | 25 kB | 05 Nov 2025, 1:25:56 PM | |
| AnnotatedPDBFileInputTest_checkPDBSequenceFeatures_wp.html | 13 kB | 05 Nov 2025, 1:25:56 PM | |
| AnnotatedPDBFileInputTest_testJalviewProjectRelocationAnnotation_187.html | 162 kB | 05 Nov 2025, 1:25:56 PM | |
| AnnotationExporterTest.html | 59 kB | 05 Nov 2025, 1:25:55 PM | |
| AnnotationExporterTest.js | 1 kB | 05 Nov 2025, 1:25:55 PM | |
| AnnotationExporterTest_testAnnotationExportAsCSV_8m.html | 111 kB | 05 Nov 2025, 1:25:55 PM | |
| AnnotationFile.html | 1.01 MB | 05 Nov 2025, 1:25:52 PM | |
| AnnotationFile.js | 60 kB | 05 Nov 2025, 1:25:52 PM | |
| AnnotationFileIOTest.html | 241 kB | 05 Nov 2025, 1:25:56 PM | |
| AnnotationFileIOTest.js | 5 kB | 05 Nov 2025, 1:25:56 PM | |
| AnnotationFileIOTest_exampleAnnotationFileIO_fx.html | 40 kB | 05 Nov 2025, 1:25:56 PM | |
| AnnotationFileIOTest_testAnnotateAlignmentView_8c.html | 110 kB | 05 Nov 2025, 1:25:56 PM | |
| AnnotationFileIOTest_testCalcIdRestore_wo.html | 103 kB | 05 Nov 2025, 1:25:56 PM | |
| AnnotationFileIOTest_testProviderRestore_42.html | 110 kB | 05 Nov 2025, 1:25:56 PM | |
| AppletFormatAdapter.html | 680 kB | 05 Nov 2025, 1:25:52 PM | |
| AppletFormatAdapter.js | 129 kB | 05 Nov 2025, 1:25:52 PM | |
| BLCFile.html | 153 kB | 05 Nov 2025, 1:25:53 PM | |
| BLCFile.js | 3 kB | 05 Nov 2025, 1:25:53 PM | |
| BackupFilenameFilter.html | 68 kB | 05 Nov 2025, 1:25:52 PM | |
| BackupFilenameFilter.js | 3 kB | 05 Nov 2025, 1:25:52 PM | |
| BackupFilenameParts.html | 129 kB | 05 Nov 2025, 1:25:52 PM | |
| BackupFilenameParts.js | 7 kB | 05 Nov 2025, 1:25:52 PM | |
| BackupFiles.html | 600 kB | 05 Nov 2025, 1:25:52 PM | |
| BackupFiles.js | 58 kB | 05 Nov 2025, 1:25:52 PM | |
| BackupFilesPresetEntry.html | 155 kB | 05 Nov 2025, 1:25:53 PM | |
| BackupFilesPresetEntry.js | 15 kB | 05 Nov 2025, 1:25:53 PM | |
| BackupFilesTest.html | 296 kB | 05 Nov 2025, 1:25:56 PM | |
| BackupFilesTest.js | 10 kB | 05 Nov 2025, 1:25:56 PM | |
| BackupFilesTest_backupsEnabledNoRollMaxTest_10a.html | 109 kB | 05 Nov 2025, 1:25:56 PM | |
| BackupFilesTest_backupsEnabledReverseRollMaxTest_p6.html | 109 kB | 05 Nov 2025, 1:25:56 PM | |
| BackupFilesTest_backupsEnabledRollMaxTest_w6.html | 101 kB | 05 Nov 2025, 1:25:56 PM | |
| BackupFilesTest_backupsEnabledSingleFileBackupTest_zh.html | 95 kB | 05 Nov 2025, 1:25:56 PM | |
| BackupFilesTest_noBackupsEnabledTest_r6.html | 109 kB | 05 Nov 2025, 1:25:56 PM | |
| BioJsHTMLOutput.html | 278 kB | 05 Nov 2025, 1:25:53 PM | |
| BioJsHTMLOutput.js | 73 kB | 05 Nov 2025, 1:25:53 PM | |
| BioJsHTMLOutputTest.html | 107 kB | 05 Nov 2025, 1:25:54 PM | |
| BioJsHTMLOutputTest.js | 2 kB | 05 Nov 2025, 1:25:54 PM | |
| BioJsHTMLOutputTest_expectedNullPointerException_b2.html | 8 kB | 05 Nov 2025, 1:25:54 PM | |
| BioJsHTMLOutputTest_getBioJsMSAVersions_ns.html | 8 kB | 05 Nov 2025, 1:25:54 PM | |
| BioJsHTMLOutputTest_getJalviewAlignmentAsJsonString_f6.html | 23 kB | 05 Nov 2025, 1:25:54 PM | |
| ClustalFile.html | 158 kB | 05 Nov 2025, 1:25:53 PM | |
| ClustalFile.js | 6 kB | 05 Nov 2025, 1:25:53 PM | |
| ClustalFileTest.html | 65 kB | 05 Nov 2025, 1:25:56 PM | |
| ClustalFileTest.js | 1 kB | 05 Nov 2025, 1:25:56 PM | |
| ClustalFileTest_testParse_noNumbering_1b4.html | 14 kB | 05 Nov 2025, 1:25:56 PM | |
| ClustalFileTest_testParse_withNumbering_8l.html | 14 kB | 05 Nov 2025, 1:25:56 PM | |
| CrossRef2xmlTests.html | 327 kB | 05 Nov 2025, 1:25:54 PM | |
| CrossRef2xmlTests.js | 4 kB | 05 Nov 2025, 1:25:54 PM | |
| CrossRef2xmlTests_openCrossrefsForEnsemblTwice_9t.html | 179 kB | 05 Nov 2025, 1:25:54 PM | |
| DBRefFile.html | 43 kB | 05 Nov 2025, 1:25:53 PM | |
| DBRefFile.js | 0.6 kB | 05 Nov 2025, 1:25:53 PM | |
| DataSourceType.html | 269 kB | 05 Nov 2025, 1:25:52 PM | |
| DataSourceType.js | 25 kB | 05 Nov 2025, 1:25:52 PM | |
| EMBLLikeFlatFile.html | 429 kB | 05 Nov 2025, 1:25:52 PM | |
| EMBLLikeFlatFile.js | 17 kB | 05 Nov 2025, 1:25:52 PM | |
| EmblFlatFile.html | 134 kB | 05 Nov 2025, 1:25:52 PM | |
| EmblFlatFile.js | 4 kB | 05 Nov 2025, 1:25:52 PM | |
| EmblFlatFileTest.html | 229 kB | 05 Nov 2025, 1:25:56 PM | |
| EmblFlatFileTest.js | 5 kB | 05 Nov 2025, 1:25:56 PM | |
| EmblFlatFileTest_testAdjustForProteinLength_16f.html | 12 kB | 05 Nov 2025, 1:25:56 PM | |
| EmblFlatFileTest_testParseToRNA_11e.html | 23 kB | 05 Nov 2025, 1:25:56 PM | |
| EmblFlatFileTest_testParse_4y.html | 22 kB | 05 Nov 2025, 1:25:56 PM | |
| EmblFlatFileTest_testParse_codonStartNot1_19i.html | 11 kB | 05 Nov 2025, 1:25:56 PM | |
| EmblFlatFileTest_testParse_noUniprotXref_161.html | 22 kB | 05 Nov 2025, 1:25:56 PM | |
| EmblFlatFileTest_testRemoveQuotes_b1.html | 8 kB | 05 Nov 2025, 1:25:56 PM | |
| FastaFile.html | 427 kB | 05 Nov 2025, 1:25:53 PM | |
| FastaFile.js | 111 kB | 05 Nov 2025, 1:25:53 PM | |
| FeaturesFile.html | 765 kB | 05 Nov 2025, 1:25:53 PM | |
| FeaturesFile.js | 27 kB | 05 Nov 2025, 1:25:53 PM | |
| FeaturesFileTest.html | 522 kB | 05 Nov 2025, 1:25:55 PM | |
| FeaturesFileTest.js | 13 kB | 05 Nov 2025, 1:25:55 PM | |
| FeaturesFileTest_readGff3File_kq.html | 39 kB | 05 Nov 2025, 1:25:55 PM | |
| FeaturesFileTest_simpleGff3FileClass_oa.html | 37 kB | 05 Nov 2025, 1:25:55 PM | |
| FeaturesFileTest_simpleGff3FileLoader_17w.html | 109 kB | 05 Nov 2025, 1:25:55 PM | |
| FeaturesFileTest_simpleGff3RelaxedIdMatching_rh.html | 36 kB | 05 Nov 2025, 1:25:55 PM | |
| FeaturesFileTest_testOutputFeatureFilters_ih.html | 17 kB | 05 Nov 2025, 1:25:56 PM | |
| FeaturesFileTest_testParseFilters_u5.html | 19 kB | 05 Nov 2025, 1:25:55 PM | |
| FeaturesFileTest_testParse_cc.html | 116 kB | 05 Nov 2025, 1:25:55 PM | |
| FeaturesFileTest_testParse_jalviewFeaturesOnly_rw.html | 104 kB | 05 Nov 2025, 1:25:55 PM | |
| FeaturesFileTest_testParse_mixedJalviewGff_5o.html | 120 kB | 05 Nov 2025, 1:25:55 PM | |
| FeaturesFileTest_testParse_pureGff3_dh.html | 118 kB | 05 Nov 2025, 1:25:55 PM | |
| FeaturesFileTest_testPrintGffFormat_3o.html | 115 kB | 05 Nov 2025, 1:25:55 PM | |
| FeaturesFileTest_testPrintGffFormat_withFilters_b5.html | 109 kB | 05 Nov 2025, 1:25:55 PM | |
| FeaturesFileTest_testPrintJalviewFormat_16t.html | 113 kB | 05 Nov 2025, 1:25:55 PM | |
| FeaturesFileTest_testPrintJalviewFormat_withFilters_ow.html | 117 kB | 05 Nov 2025, 1:25:55 PM | |
| FileFormat.html | 832 kB | 05 Nov 2025, 1:25:53 PM | |
| FileFormat.js | 84 kB | 05 Nov 2025, 1:25:53 PM | |
| FileFormatException.html | 58 kB | 05 Nov 2025, 1:25:53 PM | |
| FileFormatException.js | 2 kB | 05 Nov 2025, 1:25:53 PM | |
| FileFormatI.html | 46 kB | 05 Nov 2025, 1:25:52 PM | |
| FileFormatI.js | 0.7 kB | 05 Nov 2025, 1:25:52 PM | |
| FileFormats.html | 485 kB | 05 Nov 2025, 1:25:52 PM | |
| FileFormats.js | 74 kB | 05 Nov 2025, 1:25:52 PM | |
| FileFormatsTest.html | 137 kB | 05 Nov 2025, 1:25:56 PM | |
| FileFormatsTest.js | 3 kB | 05 Nov 2025, 1:25:56 PM | |
| FileFormatsTest_testDeregisterFileFormat_8a.html | 9 kB | 05 Nov 2025, 1:25:56 PM | |
| FileFormatsTest_testForName_k7.html | 9 kB | 05 Nov 2025, 1:25:56 PM | |
| FileFormatsTest_testGetFormats_pr.html | 9 kB | 05 Nov 2025, 1:25:56 PM | |
| FileFormatsTest_testGetReadableFormats_kz.html | 9 kB | 05 Nov 2025, 1:25:56 PM | |
| FileFormatsTest_testGetWritableFormats_px.html | 9 kB | 05 Nov 2025, 1:25:56 PM | |
| FileFormatsTest_testIsIdentifiable_uf.html | 9 kB | 05 Nov 2025, 1:25:56 PM | |
| FileFormatsTest_testRegisterFileFormat_ln.html | 9 kB | 05 Nov 2025, 1:25:56 PM | |
| FileIOTester.html | 130 kB | 05 Nov 2025, 1:25:56 PM | |
| FileIOTester.js | 3 kB | 05 Nov 2025, 1:25:56 PM | |
| FileIOTester_testGzipIo_ur.html | 12 kB | 05 Nov 2025, 1:25:56 PM | |
| FileIOTester_testGziplocalFileIO_ot.html | 11 kB | 05 Nov 2025, 1:25:56 PM | |
| FileIOTester_testIsGzipInputStream_7z.html | 12 kB | 05 Nov 2025, 1:25:56 PM | |
| FileIOTester_testNonGzipURLIO_8n.html | 12 kB | 05 Nov 2025, 1:25:56 PM | |
| FileIOTester_testNonGziplocalFileIO_tc.html | 11 kB | 05 Nov 2025, 1:25:56 PM | |
| FileIOTester_testStarsInFasta1_ia.html | 11 kB | 05 Nov 2025, 1:25:56 PM | |
| FileIOTester_testStarsInFasta2_92.html | 11 kB | 05 Nov 2025, 1:25:56 PM | |
| FileLoader.html | 601 kB | 05 Nov 2025, 1:25:53 PM | |
| FileLoader.js | 250 kB | 05 Nov 2025, 1:25:53 PM | |
| FileLoaderTest.html | 37 kB | 05 Nov 2025, 1:25:56 PM | |
| FileLoaderTest.js | 0.6 kB | 05 Nov 2025, 1:25:56 PM | |
| FileParse.html | 924 kB | 05 Nov 2025, 1:25:52 PM | |
| FileParse.js | 336 kB | 05 Nov 2025, 1:25:52 PM | |
| FormatAdapter.html | 458 kB | 05 Nov 2025, 1:25:52 PM | |
| FormatAdapter.js | 56 kB | 05 Nov 2025, 1:25:52 PM | |
| FormatAdapterTest.html | 112 kB | 05 Nov 2025, 1:25:55 PM | |
| FormatAdapterTest.js | 5 kB | 05 Nov 2025, 1:25:55 PM | |
| FormatAdapterTest_testRoundTrip_136.html | 22 kB | 05 Nov 2025, 1:25:55 PM | |
| FormatAdapterTest_testRoundTrip_16r.html | 21 kB | 05 Nov 2025, 1:25:55 PM | |
| FormatAdapterTest_testRoundTrip_184.html | 22 kB | 05 Nov 2025, 1:25:55 PM | |
| FormatAdapterTest_testRoundTrip_6u.html | 21 kB | 05 Nov 2025, 1:25:55 PM | |
| FormatAdapterTest_testRoundTrip_ba.html | 23 kB | 05 Nov 2025, 1:25:55 PM | |
| FormatAdapterTest_testRoundTrip_d6.html | 48 kB | 05 Nov 2025, 1:25:55 PM | |
| FormatAdapterTest_testRoundTrip_f4.html | 24 kB | 05 Nov 2025, 1:25:55 PM | |
| FormatAdapterTest_testRoundTrip_f7.html | 38 kB | 05 Nov 2025, 1:25:55 PM | |
| FormatAdapterTest_testRoundTrip_jc.html | 21 kB | 05 Nov 2025, 1:25:55 PM | |
| FormatAdapterTest_testRoundTrip_o8.html | 25 kB | 05 Nov 2025, 1:25:55 PM | |
| FormatAdapterTest_testRoundTrip_x7.html | 28 kB | 05 Nov 2025, 1:25:55 PM | |
| GenBankFile.html | 121 kB | 05 Nov 2025, 1:25:52 PM | |
| GenBankFile.js | 2 kB | 05 Nov 2025, 1:25:52 PM | |
| GenBankFileTest.html | 132 kB | 05 Nov 2025, 1:25:54 PM | |
| GenBankFileTest.js | 3 kB | 05 Nov 2025, 1:25:54 PM | |
| GenBankFileTest_testParse_68.html | 19 kB | 05 Nov 2025, 1:25:54 PM | |
| HTMLOutput.html | 197 kB | 05 Nov 2025, 1:25:53 PM | |
| HTMLOutput.js | 2 kB | 05 Nov 2025, 1:25:53 PM | |
| HtmlFile.html | 132 kB | 05 Nov 2025, 1:25:53 PM | |
| HtmlFile.js | 2 kB | 05 Nov 2025, 1:25:53 PM | |
| HtmlFileTest.html | 39 kB | 05 Nov 2025, 1:25:56 PM | |
| HtmlFileTest.js | 0.6 kB | 05 Nov 2025, 1:25:56 PM | |
| HtmlSvgOutput.html | 173 kB | 05 Nov 2025, 1:25:52 PM | |
| HtmlSvgOutput.js | 2 kB | 05 Nov 2025, 1:25:52 PM | |
| IdentifyFile.html | 583 kB | 05 Nov 2025, 1:25:53 PM | |
| IdentifyFile.js | 230 kB | 05 Nov 2025, 1:25:53 PM | |
| IdentifyFileTest.html | 149 kB | 05 Nov 2025, 1:25:53 PM | |
| IdentifyFileTest.js | 5 kB | 05 Nov 2025, 1:25:53 PM | |
| IdentifyFileTest_testIdentify_15.html | 11 kB | 05 Nov 2025, 1:25:53 PM | |
| IdentifyFileTest_testIdentify_17u.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| IdentifyFileTest_testIdentify_19v.html | 11 kB | 05 Nov 2025, 1:25:53 PM | |
| IdentifyFileTest_testIdentify_1a6.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| IdentifyFileTest_testIdentify_1ac.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| IdentifyFileTest_testIdentify_1c9.html | 11 kB | 05 Nov 2025, 1:25:53 PM | |
| IdentifyFileTest_testIdentify_4d.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| IdentifyFileTest_testIdentify_71.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| IdentifyFileTest_testIdentify_86.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| IdentifyFileTest_testIdentify_8r.html | 11 kB | 05 Nov 2025, 1:25:53 PM | |
| IdentifyFileTest_testIdentify_a4.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| IdentifyFileTest_testIdentify_am.html | 11 kB | 05 Nov 2025, 1:25:53 PM | |
| IdentifyFileTest_testIdentify_d9.html | 11 kB | 05 Nov 2025, 1:25:53 PM | |
| IdentifyFileTest_testIdentify_featureFile_gu.html | 11 kB | 05 Nov 2025, 1:25:53 PM | |
| IdentifyFileTest_testIdentify_h.html | 11 kB | 05 Nov 2025, 1:25:53 PM | |
| IdentifyFileTest_testIdentify_lz.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| IdentifyFileTest_testIdentify_na.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| IdentifyFileTest_testIdentify_nl.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| IdentifyFileTest_testIdentify_pf.html | 11 kB | 05 Nov 2025, 1:25:53 PM | |
| IdentifyFileTest_testIdentify_qu.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| IdentifyFileTest_testIdentify_qv.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| IdentifyFileTest_testIdentify_tm.html | 11 kB | 05 Nov 2025, 1:25:53 PM | |
| IdentifyFileTest_testLooksLikeFeatureData_34.html | 8 kB | 05 Nov 2025, 1:25:53 PM | |
| InputStreamParser.html | 44 kB | 05 Nov 2025, 1:25:53 PM | |
| InputStreamParser.js | 0.6 kB | 05 Nov 2025, 1:25:53 PM | |
| IntKeyStringValueEntry.html | 44 kB | 05 Nov 2025, 1:25:53 PM | |
| IntKeyStringValueEntry.js | 0.7 kB | 05 Nov 2025, 1:25:53 PM | |
| JPredFile.html | 220 kB | 05 Nov 2025, 1:25:53 PM | |
| JPredFile.js | 2 kB | 05 Nov 2025, 1:25:53 PM | |
| JSONFile.html | 508 kB | 05 Nov 2025, 1:25:52 PM | |
| JSONFile.js | 14 kB | 05 Nov 2025, 1:25:52 PM | |
| JSONFileTest.html | 364 kB | 05 Nov 2025, 1:25:54 PM | |
| JSONFileTest.js | 6 kB | 05 Nov 2025, 1:25:54 PM | |
| JSONFileTest_colorSchemeTest_9g.html | 8 kB | 05 Nov 2025, 1:25:54 PM | |
| JSONFileTest_hiddenColsTest_13y.html | 10 kB | 05 Nov 2025, 1:25:54 PM | |
| JSONFileTest_hiddenSeqsTest_4f.html | 8 kB | 05 Nov 2025, 1:25:54 PM | |
| JSONFileTest_isShowSeqFeaturesSet_13j.html | 8 kB | 05 Nov 2025, 1:25:54 PM | |
| JSONFileTest_roundTripTest_kp.html | 7 kB | 05 Nov 2025, 1:25:54 PM | |
| JSONFileTest_testAnnotationParsed_tv.html | 8 kB | 05 Nov 2025, 1:25:54 PM | |
| JSONFileTest_testBioJSONRoundTripWithColourSchemeNone_lp.html | 105 kB | 05 Nov 2025, 1:25:54 PM | |
| JSONFileTest_testGrpParsed_colourNone_ds.html | 125 kB | 05 Nov 2025, 1:25:54 PM | |
| JSONFileTest_testGrpParsed_ry.html | 10 kB | 05 Nov 2025, 1:25:54 PM | |
| JSONFileTest_testSeqParsed_7r.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| Jalview2xmlBase.html | 78 kB | 05 Nov 2025, 1:25:54 PM | |
| Jalview2xmlBase.js | 1 kB | 05 Nov 2025, 1:25:54 PM | |
| JalviewExportPropertiesTests.html | 71 kB | 05 Nov 2025, 1:25:54 PM | |
| JalviewExportPropertiesTests.js | 1 kB | 05 Nov 2025, 1:25:54 PM | |
| JalviewExportPropertiesTests_testImportExportPeriodGaps_15y.html | 117 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooser.html | 639 kB | 05 Nov 2025, 1:25:52 PM | |
| JalviewFileChooser.js | 137 kB | 05 Nov 2025, 1:25:53 PM | |
| JalviewFileChooserTest.html | 104 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest.js | 5 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_12.html | 11 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_17s.html | 10 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_18q.html | 10 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_4p.html | 11 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_6l.html | 10 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_6r.html | 11 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_77.html | 10 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_7g.html | 11 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_ct.html | 10 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_do.html | 10 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_hy.html | 11 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_l8.html | 11 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_rl.html | 11 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_rr.html | 10 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_sl.html | 11 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_sv.html | 11 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_t3.html | 10 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileChooserTest_checkDefaultSaveFormat_yx.html | 10 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileFilter.html | 246 kB | 05 Nov 2025, 1:25:53 PM | |
| JalviewFileFilter.js | 63 kB | 05 Nov 2025, 1:25:53 PM | |
| JalviewFileView.html | 115 kB | 05 Nov 2025, 1:25:52 PM | |
| JalviewFileView.js | 2 kB | 05 Nov 2025, 1:25:52 PM | |
| JalviewFileViewTest.html | 90 kB | 05 Nov 2025, 1:25:54 PM | |
| JalviewFileViewTest.js | 2 kB | 05 Nov 2025, 1:25:54 PM | |
| JalviewFileViewTest_testGetExtension_c9.html | 8 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileViewTest_testGetImageIcon_10c.html | 9 kB | 05 Nov 2025, 1:25:55 PM | |
| JalviewFileViewTest_testGetTypeDescription_od.html | 10 kB | 05 Nov 2025, 1:25:55 PM | |
| JnetAnnotationMaker.html | 126 kB | 05 Nov 2025, 1:25:53 PM | |
| JnetAnnotationMaker.js | 1 kB | 05 Nov 2025, 1:25:53 PM | |
| MSFfile.html | 212 kB | 05 Nov 2025, 1:25:53 PM | |
| MSFfile.js | 5 kB | 05 Nov 2025, 1:25:53 PM | |
| ModellerDescription.html | 236 kB | 05 Nov 2025, 1:25:52 PM | |
| ModellerDescription.js | 3 kB | 05 Nov 2025, 1:25:52 PM | |
| NewickFile.html | 529 kB | 05 Nov 2025, 1:25:53 PM | |
| NewickFile.js | 38 kB | 05 Nov 2025, 1:25:53 PM | |
| NewickFileTests.html | 121 kB | 05 Nov 2025, 1:25:55 PM | |
| NewickFileTests.js | 3 kB | 05 Nov 2025, 1:25:55 PM | |
| NewickFileTests_testTreeIO_13z.html | 34 kB | 05 Nov 2025, 1:25:55 PM | |
| NewickFileTests_testTreeIO_2o.html | 33 kB | 05 Nov 2025, 1:25:55 PM | |
| NewickFileTests_testTreeIO_w5.html | 36 kB | 05 Nov 2025, 1:25:55 PM | |
| PContactPredictionFile.html | 101 kB | 05 Nov 2025, 1:25:52 PM | |
| PContactPredictionFile.js | 1 kB | 05 Nov 2025, 1:25:52 PM | |
| PDBFeatureSettings.html | 121 kB | 05 Nov 2025, 1:25:53 PM | |
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| PfamFile.html | 131 kB | 05 Nov 2025, 1:25:52 PM | |
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| PfamFormatInputTest.html | 56 kB | 05 Nov 2025, 1:25:56 PM | |
| PfamFormatInputTest.js | 1.0 kB | 05 Nov 2025, 1:25:56 PM | |
| PfamFormatInputTest_testPfamFormatNoLimits_p3.html | 21 kB | 05 Nov 2025, 1:25:56 PM | |
| PfamFormatInputTest_testPfamFormatValidLimits_122.html | 21 kB | 05 Nov 2025, 1:25:56 PM | |
| PhylipFile.html | 176 kB | 05 Nov 2025, 1:25:52 PM | |
| PhylipFile.js | 6 kB | 05 Nov 2025, 1:25:52 PM | |
| PhylipFileTests.html | 128 kB | 05 Nov 2025, 1:25:54 PM | |
| PhylipFileTests.js | 3 kB | 05 Nov 2025, 1:25:54 PM | |
| PhylipFileTests_testInterleavedDataExtraction_19n.html | 22 kB | 05 Nov 2025, 1:25:54 PM | |
| PhylipFileTests_testInterleavedIO_69.html | 26 kB | 05 Nov 2025, 1:25:54 PM | |
| PhylipFileTests_testSequentialDataExtraction_t.html | 23 kB | 05 Nov 2025, 1:25:54 PM | |
| PhylipFileTests_testSequentialIO_11k.html | 19 kB | 05 Nov 2025, 1:25:54 PM | |
| PileUpfile.html | 112 kB | 05 Nov 2025, 1:25:52 PM | |
| PileUpfile.js | 2 kB | 05 Nov 2025, 1:25:52 PM | |
| RNAMLfileTest.html | 66 kB | 05 Nov 2025, 1:25:56 PM | |
| RNAMLfileTest.js | 1 kB | 05 Nov 2025, 1:25:56 PM | |
| RNAMLfileTest_testRnamlSeqImport_z6.html | 52 kB | 05 Nov 2025, 1:25:56 PM | |
| RNAMLfileTest_testRnamlToStockholmIO_ku.html | 66 kB | 05 Nov 2025, 1:25:56 PM | |
| RnamlFile.html | 145 kB | 05 Nov 2025, 1:25:53 PM | |
| RnamlFile.js | 3 kB | 05 Nov 2025, 1:25:53 PM | |
| ScoreMatrixFile.html | 266 kB | 05 Nov 2025, 1:25:53 PM | |
| ScoreMatrixFile.js | 24 kB | 05 Nov 2025, 1:25:53 PM | |
| ScoreMatrixFileTest.html | 334 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest.js | 7 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_aaIndexBlosum80_115.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_aaindexFormat_v3.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_aaindex_extraDataLines_46.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_aaindex_mMissing_cg.html | 14 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_aaindex_rowColMismatch_1bz.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_aaindex_tooFewColumns_o.html | 12 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_aaindex_tooManyRows_14c.html | 12 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_headerMissing_4l.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_ncbiBadDelimiter_49.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_ncbiBadFloat_pb.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_ncbiBadGuideCharacter_ae.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_ncbiFormat_lj.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_ncbiHeaderRepeated_h5.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_ncbiMixedDelimiters_ud.html | 12 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_ncbiNameMissing_1u.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_ncbiNotEnoughColumns_bt.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_ncbiNotEnoughRows_11w.html | 12 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_ncbiTooManyColumns_bx.html | 12 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParseMatrix_ncbiTooManyRows_16z.html | 11 kB | 05 Nov 2025, 1:25:54 PM | |
| ScoreMatrixFileTest_testParse_ncbiFormat_12o.html | 16 kB | 05 Nov 2025, 1:25:54 PM | |
| SequenceAnnotationReport.html | 631 kB | 05 Nov 2025, 1:25:52 PM | |
| SequenceAnnotationReport.js | 41 kB | 05 Nov 2025, 1:25:52 PM | |
| SequenceAnnotationReportTest.html | 309 kB | 05 Nov 2025, 1:25:55 PM | |
| SequenceAnnotationReportTest.js | 7 kB | 05 Nov 2025, 1:25:55 PM | |
| SequenceAnnotationReportTest_testAppendFeature_DescEqualsType_bo.html | 10 kB | 05 Nov 2025, 1:25:55 PM | |
| SequenceAnnotationReportTest_testAppendFeature_colouredByAttribute_gf.html | 14 kB | 05 Nov 2025, 1:25:55 PM | |
| SequenceAnnotationReportTest_testAppendFeature_disulfideBond_7e.html | 9 kB | 05 Nov 2025, 1:25:55 PM | |
| SequenceAnnotationReportTest_testAppendFeature_noScore_1a8.html | 10 kB | 05 Nov 2025, 1:25:55 PM | |
| SequenceAnnotationReportTest_testAppendFeature_status_i7.html | 11 kB | 05 Nov 2025, 1:25:55 PM | |
| SequenceAnnotationReportTest_testAppendFeature_stripHtml_1o.html | 10 kB | 05 Nov 2025, 1:25:55 PM | |
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| SequenceAnnotationReportTest_testAppendFeature_withScoreStatusAttribute_1ak.html | 14 kB | 05 Nov 2025, 1:25:55 PM | |
| SequenceAnnotationReportTest_testAppendFeature_withScore_oh.html | 11 kB | 05 Nov 2025, 1:25:55 PM | |
| SequenceAnnotationReportTest_testAppendFeatures_longText_f5.html | 11 kB | 05 Nov 2025, 1:25:55 PM | |
| SequenceAnnotationReportTest_testCreateSequenceAnnotationReport_si.html | 18 kB | 05 Nov 2025, 1:25:55 PM | |
| SequenceAnnotationReportTest_testCreateSequenceAnnotationReport_withEllipsis_74.html | 14 kB | 05 Nov 2025, 1:25:55 PM | |
| SimpleBlastFile.html | 152 kB | 05 Nov 2025, 1:25:53 PM | |
| SimpleBlastFile.js | 2 kB | 05 Nov 2025, 1:25:53 PM | |
| StockholmFile.html | 675 kB | 05 Nov 2025, 1:25:52 PM | |
| StockholmFile.js | 60 kB | 05 Nov 2025, 1:25:52 PM | |
| StockholmFileTest.html | 515 kB | 05 Nov 2025, 1:25:54 PM | |
| StockholmFileTest.js | 20 kB | 05 Nov 2025, 1:25:54 PM | |
| StockholmFileTest_curlyWUSSsecondaryStructureForRNASequence_t5.html | 60 kB | 05 Nov 2025, 1:25:54 PM | |
| StockholmFileTest_dbrefOutput_l3.html | 52 kB | 05 Nov 2025, 1:25:54 PM | |
| StockholmFileTest_descriptionLineOutput_4h.html | 39 kB | 05 Nov 2025, 1:25:54 PM | |
| StockholmFileTest_detectWussBrackets_1aq.html | 7 kB | 05 Nov 2025, 1:25:54 PM | |
| StockholmFileTest_fullWUSSsecondaryStructureForRNASequence_pe.html | 49 kB | 05 Nov 2025, 1:25:54 PM | |
| StockholmFileTest_pfamFileDataExtraction_xt.html | 46 kB | 05 Nov 2025, 1:25:54 PM | |
| StockholmFileTest_pfamFileIO_in.html | 50 kB | 05 Nov 2025, 1:25:54 PM | |
| StockholmFileTest_rfamFileIO_g5.html | 53 kB | 05 Nov 2025, 1:25:54 PM | |
| StockholmFileTest_secondaryStructureForRNASequence_nj.html | 49 kB | 05 Nov 2025, 1:25:54 PM | |
| StockholmFileTest_stockholmFileRnaSSAlphaChars_26.html | 46 kB | 05 Nov 2025, 1:25:54 PM | |
| StockholmFileTest_stockholmFileRnaSSSpaceChars_mk.html | 26 kB | 05 Nov 2025, 1:25:54 PM | |
| StockholmFileTest_testAnnotationEquivalence_5s.html | 12 kB | 05 Nov 2025, 1:25:54 PM | |
| StructureFile.html | 446 kB | 05 Nov 2025, 1:25:53 PM | |
| StructureFile.js | 97 kB | 05 Nov 2025, 1:25:53 PM | |
| TCoffeeScoreFile.html | 362 kB | 05 Nov 2025, 1:25:52 PM | |
| TCoffeeScoreFile.js | 14 kB | 05 Nov 2025, 1:25:52 PM | |
| TCoffeeScoreFileTest.html | 171 kB | 05 Nov 2025, 1:25:56 PM | |
| TCoffeeScoreFileTest.js | 4 kB | 05 Nov 2025, 1:25:56 PM | |
| TCoffeeScoreFileTest_testGetAsArray_19r.html | 11 kB | 05 Nov 2025, 1:25:56 PM | |
| TCoffeeScoreFileTest_testGetAsList_1e.html | 11 kB | 05 Nov 2025, 1:25:56 PM | |
| TCoffeeScoreFileTest_testHeightAndWidthWithResidueNumbers_7p.html | 11 kB | 05 Nov 2025, 1:25:56 PM | |
| TCoffeeScoreFileTest_testHeightAndWidth_sk.html | 11 kB | 05 Nov 2025, 1:25:56 PM | |
| TCoffeeScoreFileTest_testParse_my.html | 11 kB | 05 Nov 2025, 1:25:56 PM | |
| TCoffeeScoreFileTest_testReadBlock_1dd.html | 10 kB | 05 Nov 2025, 1:25:56 PM | |
| TCoffeeScoreFileTest_testReadHeader_0.html | 12 kB | 05 Nov 2025, 1:25:56 PM | |
| TCoffeeScoreFileTest_testWrongFile_98.html | 10 kB | 05 Nov 2025, 1:25:56 PM | |
| VamsasAppDatastore.html | 1.26 MB | 05 Nov 2025, 1:25:52 PM | |
| VamsasAppDatastore.js | 13 kB | 05 Nov 2025, 1:25:52 PM | |
| WSWUBlastClient.html | 177 kB | 05 Nov 2025, 1:25:52 PM | |
| WSWUBlastClient.js | 2 kB | 05 Nov 2025, 1:25:52 PM | |
| WindowsFileLoadAndSaveTest.html | 66 kB | 05 Nov 2025, 1:25:56 PM | |
| WindowsFileLoadAndSaveTest.js | 1 kB | 05 Nov 2025, 1:25:56 PM | |
| WindowsFileLoadAndSaveTest_loadAndSaveAlignment_rn.html | 120 kB | 05 Nov 2025, 1:25:56 PM | |
| pkg-summary.html | 85 kB | 05 Nov 2025, 1:25:56 PM | |
| quick-wins.html | 31 kB | 05 Nov 2025, 1:25:56 PM | |
| test-AnnotatedPDBFileInputTest.html | 10 kB | 05 Nov 2025, 1:25:40 PM | |
| test-AnnotationExporterTest.html | 9 kB | 05 Nov 2025, 1:25:40 PM | |
| test-AnnotationFileIOTest.html | 10 kB | 05 Nov 2025, 1:25:40 PM | |
| test-BackupFilesTest.html | 11 kB | 05 Nov 2025, 1:25:40 PM | |
| test-BioJsHTMLOutputTest.html | 10 kB | 05 Nov 2025, 1:25:40 PM | |
| test-ClustalFileTest.html | 9 kB | 05 Nov 2025, 1:25:40 PM | |
| test-CrossRef2xmlTests.html | 9 kB | 05 Nov 2025, 1:25:40 PM | |
| test-EmblFlatFileTest.html | 11 kB | 05 Nov 2025, 1:25:40 PM | |
| test-FeaturesFileTest.html | 15 kB | 05 Nov 2025, 1:25:40 PM | |
| test-FileFormatsTest.html | 12 kB | 05 Nov 2025, 1:25:40 PM | |
| test-FileIOTester.html | 12 kB | 05 Nov 2025, 1:25:40 PM | |
| test-FileLoaderTest.html | 8 kB | 05 Nov 2025, 1:25:40 PM | |
| test-FormatAdapterTest.html | 13 kB | 05 Nov 2025, 1:25:40 PM | |
| test-GenBankFileTest.html | 9 kB | 05 Nov 2025, 1:25:40 PM | |
| test-HtmlFileTest.html | 8 kB | 05 Nov 2025, 1:25:40 PM | |
| test-IdentifyFileTest.html | 19 kB | 05 Nov 2025, 1:25:40 PM | |
| test-JSONFileTest.html | 13 kB | 05 Nov 2025, 1:25:40 PM | |
| test-JalviewExportPropertiesTests.html | 9 kB | 05 Nov 2025, 1:25:40 PM | |
| test-JalviewFileChooserTest.html | 17 kB | 05 Nov 2025, 1:25:40 PM | |
| test-JalviewFileViewTest.html | 10 kB | 05 Nov 2025, 1:25:40 PM | |
| test-NewickFileTests.html | 10 kB | 05 Nov 2025, 1:25:40 PM | |
| test-PfamFormatInputTest.html | 9 kB | 05 Nov 2025, 1:25:40 PM | |
| test-PhylipFileTests.html | 10 kB | 05 Nov 2025, 1:25:40 PM | |
| test-RNAMLfileTest.html | 9 kB | 05 Nov 2025, 1:25:40 PM | |
| test-ScoreMatrixFileTest.html | 19 kB | 05 Nov 2025, 1:25:40 PM | |
| test-SequenceAnnotationReportTest.html | 15 kB | 05 Nov 2025, 1:25:40 PM | |
| test-StockholmFileTest.html | 14 kB | 05 Nov 2025, 1:25:40 PM | |
| test-TCoffeeScoreFileTest.html | 12 kB | 05 Nov 2025, 1:25:40 PM | |
| test-WindowsFileLoadAndSaveTest.html | 9 kB | 05 Nov 2025, 1:25:40 PM | |
| test-pkg-summary.html | 33 kB | 05 Nov 2025, 1:25:40 PM | |
| testsrc-pkg-summary.html | 46 kB | 05 Nov 2025, 1:25:56 PM | |
| top-risks.html | 32 kB | 05 Nov 2025, 1:25:56 PM |