Build: #208 failed
Job: Default Job failed
Get sequence proxy indexed: Test case result
The below summarizes the result of the test "Get sequence proxy indexed" in build 208 of Jalview Builds - jalview develop build - Jalview-BH-JAL-3026 - Default Job.
- Description
- Get sequence proxy indexed
- Test class
- Ant suite > Ant test > jalview.ext.htsjdk.TestHtsContigDb
- Method
- testGetSequenceProxy_indexed
- Duration
- < 1 sec
- Status
- Failed (Existing Failure)
Error Log
Classname: java.lang.NullPointerException Message: null Stacktrace: java.lang.NullPointerException at htsjdk.samtools.reference.ReferenceSequenceFileFactory.getReferenceSequenceFile(ReferenceSequenceFileFactory.java:69) at jalview.ext.htsjdk.HtsContigDb.initSource(HtsContigDb.java:104) at jalview.ext.htsjdk.HtsContigDb.<init>(HtsContigDb.java:79) at jalview.ext.htsjdk.TestHtsContigDb.__CLR4_2_1tl2la62vbj(TestHtsContigDb.java:77) at jalview.ext.htsjdk.TestHtsContigDb.testGetSequenceProxy_indexed(TestHtsContigDb.java:75) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.testng.internal.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:85) at org.testng.internal.Invoker.invokeMethod(Invoker.java:648) at org.testng.internal.Invoker.invokeTestMethod(Invoker.java:834) at org.testng.internal.Invoker.invokeTestMethods(Invoker.java:1142) at org.testng.internal.TestMethodWorker.invokeTestMethods(TestMethodWorker.java:124) at org.testng.internal.TestMethodWorker.run(TestMethodWorker.java:108) at org.testng.TestRunner.privateRun(TestRunner.java:771) at org.testng.TestRunner.run(TestRunner.java:621) at org.testng.SuiteRunner.runTest(SuiteRunner.java:357) at org.testng.SuiteRunner.runSequentially(SuiteRunner.java:352) at org.testng.SuiteRunner.privateRun(SuiteRunner.java:310) at org.testng.SuiteRunner.run(SuiteRunner.java:259) at org.testng.SuiteRunnerWorker.runSuite(SuiteRunnerWorker.java:52) at org.testng.SuiteRunnerWorker.run(SuiteRunnerWorker.java:86) at org.testng.TestNG.runSuitesSequentially(TestNG.java:1176) at org.testng.TestNG.runSuitesLocally(TestNG.java:1101) at org.testng.TestNG.run(TestNG.java:1009) at org.testng.TestNG.privateMain(TestNG.java:1316) at org.testng.TestNG.main(TestNG.java:1285)