Build #216

Creates the getdown channel for the Jalview Development edition

Build: #216 was successful Changes by Gitlab User

Code commits

Jalview Gitlab

  • Gitlab User

    Gitlab User 74108b5332c0b49edc09570b36614c0ada40d3f2

    Merge branch 'JAL-4474_jalview.ps1_not_working' into 'develop'
    Resolve JAL-4474 "Jalview.ps1 not working"

    See merge request jalview/jalview!4

  • Gitlab User

    Gitlab User 98f0f65d3e227ac1492aeb100cda707e4e03138e

    Merge branch 'develop' into JAL-4474_jalview.ps1_not_working

  • Gitlab User

    Gitlab User 8b9bf95252c1f25e70370efc50e6e1ea50cc20f9

    Merge branch 'bug/JAL-4477_unmapped_filename_characters' into 'develop'
    JAL-4477 Support unmapped filename characters

    See merge request jalview/jalview!3

  • Gitlab User

    Gitlab User 2ee075e1df2b2ec3246a9b0f2f2ed596adf2c095 m

    Merge branch 'develop' into bug/JAL-4477_unmapped_filename_characters

  • Ben Soares <b.soares@dundee.ac.uk>

    Ben Soares <b.soares@dundee.ac.uk> c0e2485dfbfd25cda3c64d6974171b034115fcd1 m

    JAL-4491 Allow getdown to download missing cert-chain certificates if not in the cacerts bundle (Jalview already does this). Recompile.

    • getdown/lib/getdown-core.jar (version c0e2485dfbfd25cda3c64d6974171b034115fcd1)
    • getdown/lib/getdown-launcher-local.jar (version c0e2485dfbfd25cda3c64d6974171b034115fcd1)
    • getdown/lib/getdown-launcher.jar (version c0e2485dfbfd25cda3c64d6974171b034115fcd1)
    • j11lib/getdown-core.jar (version c0e2485dfbfd25cda3c64d6974171b034115fcd1)
    • j8lib/getdown-core.jar (version c0e2485dfbfd25cda3c64d6974171b034115fcd1)
  • Ben Soares <b.soares@dundee.ac.uk>

    Ben Soares <b.soares@dundee.ac.uk> 1580c9fc52c765154b5af41c5c20dffa14c5aaeb m

    JAL-4491 Allow getdown to download missing cert-chain certificates if not in the cacerts bundle (Jalview already does this).

    • getdown/lib/getdown-core.jar (version 1580c9fc52c765154b5af41c5c20dffa14c5aaeb)
    • getdown/lib/getdown-launcher-local.jar (version 1580c9fc52c765154b5af41c5c20dffa14c5aaeb)
    • getdown/lib/getdown-launcher.jar (version 1580c9fc52c765154b5af41c5c20dffa14c5aaeb)
    • getdown/src/getdown/launcher/src/main/java/com/threerings/getdown/launcher/GetdownApp.java (version 1580c9fc52c765154b5af41c5c20dffa14c5aaeb)
    • j11lib/getdown-core.jar (version 1580c9fc52c765154b5af41c5c20dffa14c5aaeb)
    • j8lib/getdown-core.jar (version 1580c9fc52c765154b5af41c5c20dffa14c5aaeb)
  • Ben Soares <b.soares@dundee.ac.uk>

    Ben Soares <b.soares@dundee.ac.uk> 94e5871a372d9a5bc1284e4d3026e485d888c1c6 m

    JAL-4477 Re-work install4j and getdown to use the installer.appdir first or installer.original_appdir if installer.appdir doesn't exist. Fix FileUtils to workj with getdown.

    • getdown/lib/getdown-core.jar (version 94e5871a372d9a5bc1284e4d3026e485d888c1c6)
    • getdown/lib/getdown-launcher-local.jar (version 94e5871a372d9a5bc1284e4d3026e485d888c1c6)
    • getdown/lib/getdown-launcher.jar (version 94e5871a372d9a5bc1284e4d3026e485d888c1c6)
    • getdown/src/getdown/core/src/main/java/com/threerings/getdown/data/EnvConfig.java (version 94e5871a372d9a5bc1284e4d3026e485d888c1c6)
    • getdown/src/getdown/core/src/main/java/jalview/util/FileUtils.java (version 94e5871a372d9a5bc1284e4d3026e485d888c1c6)
    • j11lib/getdown-core.jar (version 94e5871a372d9a5bc1284e4d3026e485d888c1c6)
    • j8lib/getdown-core.jar (version 94e5871a372d9a5bc1284e4d3026e485d888c1c6)
    • src/jalview/util/FileUtils.java (version 94e5871a372d9a5bc1284e4d3026e485d888c1c6)
    • utils/install4j/install4j11_template.install4j (version 94e5871a372d9a5bc1284e4d3026e485d888c1c6)
  • Gitlab User

    Gitlab User 311dde57963505e74802f9bed65b0548d687ccc5 m

    JAL-4477 missing import ?  not sure how I missed this !

    • src/jalview/util/FileUtils.java (version 311dde57963505e74802f9bed65b0548d687ccc5)
  • Gitlab User

    Gitlab User 229aab6f25af23ed06b7e7a25b6b1fd968d719c9 m

    Merge branch 'develop' into bug/JAL-4477_unmapped_filename_characters

  • Ben Soares <b.soares@dundee.ac.uk>

    Ben Soares <b.soares@dundee.ac.uk> 39a5f34b6bedd2e39ba1b960f1928828205c754d m

    Merge branch 'bug/JAL-4477_unmapped_filename_characters' into JAL-4474_jalview.ps1_not_working

  • Ben Soares <b.soares@dundee.ac.uk>

    Ben Soares <b.soares@dundee.ac.uk> 8ff399e027d618b700e06d61c842dd98a6792f63 m

    Merge branch 'develop' into bug/JAL-4477_unmapped_filename_characters

  • Ben Soares <b.soares@dundee.ac.uk>

    Ben Soares <b.soares@dundee.ac.uk> aa64cdbd2331e39a4158e092b4a1aea806edf54f m

    JAL-4477 Forcing UTF-8 system properties through install4j launch and getdown launch. Works with Java 11 when 'Worldwide language' support is set.

    • getdown/lib/getdown-core.jar (version aa64cdbd2331e39a4158e092b4a1aea806edf54f)
    • getdown/lib/getdown-launcher-local.jar (version aa64cdbd2331e39a4158e092b4a1aea806edf54f)
    • getdown/lib/getdown-launcher.jar (version aa64cdbd2331e39a4158e092b4a1aea806edf54f)
    • getdown/src/getdown/core/src/main/java/com/threerings/getdown/data/Application.java (version aa64cdbd2331e39a4158e092b4a1aea806edf54f)
    • getdown/src/getdown/core/src/main/java/com/threerings/getdown/data/EnvConfig.java (version aa64cdbd2331e39a4158e092b4a1aea806edf54f)
    • j11lib/getdown-core.jar (version aa64cdbd2331e39a4158e092b4a1aea806edf54f)
    • j8lib/getdown-core.jar (version aa64cdbd2331e39a4158e092b4a1aea806edf54f)
    • utils/install4j/install4j11_template.install4j (version aa64cdbd2331e39a4158e092b4a1aea806edf54f)
  • Ben Soares <b.soares@dundee.ac.uk>

    Ben Soares <b.soares@dundee.ac.uk> 83d8f438a0283c80b2ffb37377e1575214999ca3 m

    JAL-4477 install4j 11 template

    • utils/install4j/install4j11_template.install4j (version 83d8f438a0283c80b2ffb37377e1575214999ca3)
  • Ben Soares <b.soares@dundee.ac.uk>

    Ben Soares <b.soares@dundee.ac.uk> 9bc405ba5052f0835f0875a3094df4d4d0f5550f m

    JAL-4477 Change to Files.createDirectories(). Adding sun.jnu.encoding=UTF-8 to install4j and getdown launches

    • getdown/lib/getdown-core.jar (version 9bc405ba5052f0835f0875a3094df4d4d0f5550f)
    • getdown/lib/getdown-launcher-local.jar (version 9bc405ba5052f0835f0875a3094df4d4d0f5550f)
    • getdown/lib/getdown-launcher.jar (version 9bc405ba5052f0835f0875a3094df4d4d0f5550f)
    • getdown/src/getdown/core/src/main/java/com/threerings/getdown/data/Application.java (version 9bc405ba5052f0835f0875a3094df4d4d0f5550f)
    • getdown/src/getdown/core/src/main/java/com/threerings/getdown/data/EnvConfig.java (version 9bc405ba5052f0835f0875a3094df4d4d0f5550f)
    • getdown/src/getdown/core/src/main/java/jalview/util/FileUtils.java (version 9bc405ba5052f0835f0875a3094df4d4d0f5550f)
    • gradle.properties (version 9bc405ba5052f0835f0875a3094df4d4d0f5550f)
    • j11lib/getdown-core.jar (version 9bc405ba5052f0835f0875a3094df4d4d0f5550f)
    • j8lib/getdown-core.jar (version 9bc405ba5052f0835f0875a3094df4d4d0f5550f)
    • src/jalview/util/FileUtils.java (version 9bc405ba5052f0835f0875a3094df4d4d0f5550f)
  • Ben Soares <b.soares@dundee.ac.uk>

    Ben Soares <b.soares@dundee.ac.uk> 5f9a8d398c4f55ddb96e10f89a1aa08fba9360a8 m

    JAL-4477 Using FileUtils.mkdirs(file) instead of file.mkdirs() in getdown and FileUtils

    • getdown/lib/getdown-core.jar (version 5f9a8d398c4f55ddb96e10f89a1aa08fba9360a8)
    • getdown/lib/getdown-launcher-local.jar (version 5f9a8d398c4f55ddb96e10f89a1aa08fba9360a8)
    • getdown/lib/getdown-launcher.jar (version 5f9a8d398c4f55ddb96e10f89a1aa08fba9360a8)
    • getdown/src/getdown/core/src/main/java/com/threerings/getdown/cache/ResourceCache.java (version 5f9a8d398c4f55ddb96e10f89a1aa08fba9360a8)
    • getdown/src/getdown/core/src/main/java/com/threerings/getdown/data/Application.java (version 5f9a8d398c4f55ddb96e10f89a1aa08fba9360a8)
    • getdown/src/getdown/core/src/main/java/com/threerings/getdown/data/EnvConfig.java (version 5f9a8d398c4f55ddb96e10f89a1aa08fba9360a8)
    • getdown/src/getdown/core/src/main/java/com/threerings/getdown/net/Downloader.java (version 5f9a8d398c4f55ddb96e10f89a1aa08fba9360a8)
    • getdown/src/getdown/core/src/main/java/com/threerings/getdown/tools/Patcher.java (version 5f9a8d398c4f55ddb96e10f89a1aa08fba9360a8)
    • getdown/src/getdown/core/src/main/java/com/threerings/getdown/util/FileUtil.java (version 5f9a8d398c4f55ddb96e10f89a1aa08fba9360a8)
    • getdown/src/getdown/core/src/main/java/jalview/util/FileUtils.java (version 5f9a8d398c4f55ddb96e10f89a1aa08fba9360a8)
    • j11lib/getdown-core.jar (version 5f9a8d398c4f55ddb96e10f89a1aa08fba9360a8)
    • j8lib/getdown-core.jar (version 5f9a8d398c4f55ddb96e10f89a1aa08fba9360a8)
    • src/jalview/util/FileUtils.java (version 5f9a8d398c4f55ddb96e10f89a1aa08fba9360a8)
  • Ben Soares <b.soares@dundee.ac.uk>

    Ben Soares <b.soares@dundee.ac.uk> e8a6741a991eebd9fc9ef2b39b632810604c0cd0 m

    Changed getdown file.getCanonicalPath() and file.mkdirs to use FileUtils helper methods

    • getdown/lib/FJVL_VERSION (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)
    • getdown/lib/JVL_VERSION (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)
    • getdown/lib/getdown-core.jar (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)
    • getdown/lib/getdown-launcher-local.jar (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)
    • getdown/lib/getdown-launcher.jar (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)
    • getdown/src/getdown/ant/pom.xml (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)
    • getdown/src/getdown/core/pom.xml (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)
    • getdown/src/getdown/core/src/main/java/com/threerings/getdown/data/Application.java (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)
    • getdown/src/getdown/core/src/main/java/com/threerings/getdown/data/EnvConfig.java (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)
    • getdown/src/getdown/core/src/main/java/com/threerings/getdown/util/LaunchUtil.java (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)
    • getdown/src/getdown/core/src/main/java/jalview/util/FileUtils.java (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)
    • getdown/src/getdown/core/src/main/java/jalview/util/HttpUtils.java (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)
    • getdown/src/getdown/launcher/pom.xml (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)
    • getdown/src/getdown/mvn_cmd (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)
    • getdown/src/getdown/pom.xml (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)
    • j11lib/getdown-core.jar (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)
    • j8lib/getdown-core.jar (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)
    • src/jalview/util/FileUtils.java (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)
    • src/jalview/util/HttpUtils.java (version e8a6741a991eebd9fc9ef2b39b632810604c0cd0)