|
jalview.ws.params.ParamDatastoreI
jalview.ws.params.ParamDatastoreI
|
1.0100%
|
|
|
jalview.gui.ItemsRenderer
jalview.gui.ItemsRenderer
|
0.777777877.8%
|
|
|
jalview.io.LayeredDBNParser
jalview.io.LayeredDBNParser
|
0.716417971.6%
|
|
|
jalview.io.LayeredDBNParser.Record
jalview.io.LayeredDBNParser.Record
|
0.6428571364.3%
|
|
|
jalview.io.LayeredDBNParser.Chain
jalview.io.LayeredDBNParser.Chain
|
0.550%
|
|
|
com.stevesoft.pat.wrap.StringWrap
com.stevesoft.pat.wrap.StringWrap
|
0.550%
|
|
|
jalview.analysis.SecStrConsensus.SimpleBP
jalview.analysis.SecStrConsensus.SimpleBP
|
0.550%
|
|
|
jalview.ws2.gui.WebServicesMenuManager
jalview.ws2.gui.WebServicesMenuManager
|
0.4653061346.5%
|
|
|
jalview.datamodel.rna.AnnotCharSequence
jalview.datamodel.rna.AnnotCharSequence
|
0.464285746.4%
|
|
|
jalview.analysis.Rna
jalview.analysis.Rna
|
0.4646%
|
|
|
jalview.ws2.gui.WebServicesMenuManager.InteractiveServiceEntryGroup
jalview.ws2.gui.WebServicesMenuManager.InteractiveServiceEntryGroup
|
0.4579439245.8%
|
|
|
jalview.io.AlignFile
jalview.io.AlignFile
|
0.4324324443.2%
|
|
|
jalview.datamodel.HiddenCursorPosition
jalview.datamodel.HiddenCursorPosition
|
0.4285714342.9%
|
|
|
jalview.ws2.actions.BaseAction
jalview.ws2.actions.BaseAction
|
0.440%
|
|
|
com.stevesoft.pat.End
com.stevesoft.pat.End
|
0.3793103437.9%
|
|
|
com.stevesoft.pat.Start
com.stevesoft.pat.Start
|
0.3636363736.4%
|
|
|
jalview.bin.ApplicationSingletonProvider
jalview.bin.ApplicationSingletonProvider
|
0.3428571534.3%
|
|
|
jalview.datamodel.rna.NucStructure
jalview.datamodel.rna.NucStructure
|
0.3404255234%
|
|
|
jalview.ws.rest.RestServiceDescription
jalview.ws.rest.RestServiceDescription
|
0.3221649532.2%
|
|
|
com.stevesoft.pat.FastMulti
com.stevesoft.pat.FastMulti
|
0.314814831.5%
|
|
|
jalview.ws.api.UIinfo
jalview.ws.api.UIinfo
|
0.313725531.4%
|
|
|
jalview.io.LayeredDBNParser.BpSpec
jalview.io.LayeredDBNParser.BpSpec
|
0.312531.2%
|
|
|
jalview.ws2.api.WebService
jalview.ws2.api.WebService
|
0.330%
|
|
|
jalview.util.MessageManager
jalview.util.MessageManager
|
0.285714328.6%
|
|
|
com.stevesoft.pat.Bracket
com.stevesoft.pat.Bracket
|
0.27527.5%
|
|
|
jalview.io.IdentifyFile
jalview.io.IdentifyFile
|
0.247159124.7%
|
|
|
jalview.ws.rest.params.Alignment
jalview.ws.rest.params.Alignment
|
0.2435897424.4%
|
|
|
jalview.datamodel.SequenceCursor
jalview.datamodel.SequenceCursor
|
0.2333333323.3%
|
|
|
jalview.ws.rest.InputType
jalview.ws.rest.InputType
|
0.2056074720.6%
|
|
|
com.stevesoft.pat.Range
com.stevesoft.pat.Range
|
0.2045454520.5%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.1968503919.7%
|
|
|
jalview.datamodel.AlignmentAnnotation
jalview.datamodel.AlignmentAnnotation
|
0.1801801818%
|
|
|
com.stevesoft.pat.oneChar
com.stevesoft.pat.oneChar
|
0.1714285817.1%
|
|
|
jalview.log.JalviewAppender
jalview.log.JalviewAppender
|
0.1666666716.7%
|
|
|
com.stevesoft.pat.Or
com.stevesoft.pat.Or
|
0.1666666716.7%
|
|
|
com.stevesoft.pat.Pattern
com.stevesoft.pat.Pattern
|
0.1666666716.7%
|
|
|
jalview.ws.jws1.WS1Client
jalview.ws.jws1.WS1Client
|
0.1616%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.1589958215.9%
|
|
|
jalview.io.FileParse
jalview.io.FileParse
|
0.1578947315.8%
|
|
|
jalview.ws.rest.RestClient
jalview.ws.rest.RestClient
|
0.1466666614.7%
|
|
|
jalview.log.JLogger
jalview.log.JLogger
|
0.1428571514.3%
|
|
|
jalview.ws.rest.params.SeqGroupIndexVector
jalview.ws.rest.params.SeqGroupIndexVector
|
0.12408759412.4%
|
|
|
jalview.datamodel.rna.NucStructureI
jalview.datamodel.rna.NucStructureI
|
0.1176470611.8%
|
|
|
jalview.log.JLoggerLog4j
jalview.log.JLoggerLog4j
|
0.10679611610.7%
|
|
|
jalview.ws.rest.params.AnnotationFile
jalview.ws.rest.params.AnnotationFile
|
0.10256410410.3%
|
|
|
com.stevesoft.pat.patInt
com.stevesoft.pat.patInt
|
0.110%
|
|
|
jalview.bin.Console
jalview.bin.Console
|
0.09905669.9%
|
|
|
jalview.ws.WSClient
jalview.ws.WSClient
|
0.098039229.8%
|
|
|
jalview.ws2.client.jpred4.JPred4WSDiscoverer
jalview.ws2.client.jpred4.JPred4WSDiscoverer
|
0.09523819.5%
|
|
|
jalview.util.StringUtils
jalview.util.StringUtils
|
0.090395489%
|
|
|
jalview.ws.jws1.Discoverer
jalview.ws.jws1.Discoverer
|
0.0848484868.5%
|
|
|
jalview.gui.JvSwingUtils
jalview.gui.JvSwingUtils
|
0.082758628.3%
|
|
|
jalview.ws2.client.ebi.JobDispatcherWSDiscoverer
jalview.ws2.client.ebi.JobDispatcherWSDiscoverer
|
0.081632658.2%
|
|
|
jalview.io.FileFormats
jalview.io.FileFormats
|
0.088%
|
|
|
jalview.io.StockholmFile
jalview.io.StockholmFile
|
0.074626867.5%
|
|
|
jalview.datamodel.Annotation
jalview.datamodel.Annotation
|
0.0714285757.1%
|
|
|
jalview.io.AppletFormatAdapter
jalview.io.AppletFormatAdapter
|
0.065217396.5%
|
|
|
ext.vamsas.ServiceHandle
ext.vamsas.ServiceHandle
|
0.061224496.1%
|
|
|
jalview.datamodel.SequenceFeature
jalview.datamodel.SequenceFeature
|
0.057553965.8%
|
|
|
jalview.ws2.client.api.AbstractWebServiceDiscoverer
jalview.ws2.client.api.AbstractWebServiceDiscoverer
|
0.0566037745.7%
|
|
|
jalview.io.FileFormat
jalview.io.FileFormat
|
0.0536912755.4%
|
|
|
jalview.ws2.params.SimpleParamDatastore
jalview.ws2.params.SimpleParamDatastore
|
0.055%
|
|
|
com.stevesoft.pat.Regex
com.stevesoft.pat.Regex
|
0.049090914.9%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.0463871554.6%
|
|
|
jalview.bin.Cache
jalview.bin.Cache
|
0.0311653113.1%
|
|
|
jalview.ws.jws1.JPredClient
jalview.ws.jws1.JPredClient
|
0.0310559013.1%
|
|
|
com.stevesoft.pat.RegRes
com.stevesoft.pat.RegRes
|
0.0289855082.9%
|
|
|
jalview.gui.AlignFrame
jalview.gui.AlignFrame
|
0.0206637442.1%
|
|
|
jalview.ws.jws2.Jws2Discoverer
jalview.ws.jws2.Jws2Discoverer
|
0.019230771.9%
|
|
|
jalview.datamodel.HiddenColumnsCursor
jalview.datamodel.HiddenColumnsCursor
|
0.0156251.6%
|
|
|
jalview.gui.BlogReader
jalview.gui.BlogReader
|
0.01381215451.4%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.0127388541.3%
|
|
|
jalview.util.Platform
jalview.util.Platform
|
0.0123762381.2%
|
|
|
jalview.datamodel.HiddenSequences
jalview.datamodel.HiddenSequences
|
0.009132420.9%
|
|
|
jalview.schemes.ResidueProperties
jalview.schemes.ResidueProperties
|
0.00772797550.8%
|
|
|
jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
|
0.00235849060.2%
|
|
|
jalview.viewmodel.AlignmentViewport
jalview.viewmodel.AlignmentViewport
|
0.00131147540.1%
|
|
