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Coverage Report

Test testReplaceOddGaps

Test
testReplaceOddGaps 1PASS 4 Jun 14:19:13 0.005
 
testReplaceOddGaps
jalview.ws.params.ParamDatastoreI   jalview.ws.params.ParamDatastoreI 1.0100%
jalview.analysis.Conservation   jalview.analysis.Conservation 0.613526661.4%
jalview.ws2.gui.WebServicesMenuManager   jalview.ws2.gui.WebServicesMenuManager 0.4693877746.9%
jalview.ws.jws2.MsaWSClient   jalview.ws.jws2.MsaWSClient 0.4671052746.7%
jalview.ws2.gui.WebServicesMenuManager.InteractiveServiceEntryGroup   jalview.ws2.gui.WebServicesMenuManager.InteractiveServiceEntryGroup 0.4579439245.8%
jalview.ws.api.UIinfo   jalview.ws.api.UIinfo 0.3921568739.2%
jalview.ws.jws2.PreferredServiceRegistry   jalview.ws.jws2.PreferredServiceRegistry 0.3544973435.4%
jalview.bin.ApplicationSingletonProvider   jalview.bin.ApplicationSingletonProvider 0.3428571534.3%
jalview.ws2.actions.BaseAction   jalview.ws2.actions.BaseAction 0.3428571534.3%
jalview.ws.jws2.Jws2Client   jalview.ws.jws2.Jws2Client 0.3333333433.3%
jalview.ws.rest.RestServiceDescription   jalview.ws.rest.RestServiceDescription 0.3221649532.2%
jalview.ws2.api.WebService   jalview.ws2.api.WebService 0.330%
jalview.gui.JvSwingUtils   jalview.gui.JvSwingUtils 0.2620689626.2%
jalview.workers.ConservationThread   jalview.workers.ConservationThread 0.2619047826.2%
jalview.ws.jws2.JabaPreset   jalview.ws.jws2.JabaPreset 0.2525%
jalview.ws.rest.params.Alignment   jalview.ws.rest.params.Alignment 0.2435897424.4%
jalview.util.MessageManager   jalview.util.MessageManager 0.2380952423.8%
jalview.ws.WSClient   jalview.ws.WSClient 0.2352941223.5%
jalview.workers.AlignCalcManager2.SimpleWorkerManager   jalview.workers.AlignCalcManager2.SimpleWorkerManager 0.2142857221.4%
jalview.ws.rest.InputType   jalview.ws.rest.InputType 0.2056074720.6%
jalview.ws.api.ServiceWithParameters   jalview.ws.api.ServiceWithParameters 0.187518.8%
jalview.workers.AlignCalcManager2.WorkerManager   jalview.workers.AlignCalcManager2.WorkerManager 0.1666666716.7%
jalview.log.JalviewAppender   jalview.log.JalviewAppender 0.1666666716.7%
jalview.ws.jws1.WS1Client   jalview.ws.jws1.WS1Client 0.1616%
jalview.analysis.AnnotationSorter   jalview.analysis.AnnotationSorter 0.1562515.6%
jalview.ws.rest.RestClient   jalview.ws.rest.RestClient 0.1466666614.7%
jalview.log.JLogger   jalview.log.JLogger 0.1428571514.3%
jalview.util.Format   jalview.util.Format 0.12629412.6%
jalview.ws.rest.params.SeqGroupIndexVector   jalview.ws.rest.params.SeqGroupIndexVector 0.12408759412.4%
jalview.datamodel.Annotation   jalview.datamodel.Annotation 0.11428571511.4%
jalview.log.JLoggerLog4j   jalview.log.JLoggerLog4j 0.10679611610.7%
jalview.util.QuickSort   jalview.util.QuickSort 0.10355987410.4%
jalview.ws.rest.params.AnnotationFile   jalview.ws.rest.params.AnnotationFile 0.10256410410.3%
jalview.ws2.client.jpred4.JPred4WSDiscoverer   jalview.ws2.client.jpred4.JPred4WSDiscoverer 0.09523819.5%
jalview.gui.AppVarna   jalview.gui.AppVarna 0.090592339.1%
jalview.util.StringUtils   jalview.util.StringUtils 0.090395489%
jalview.bin.Console   jalview.bin.Console 0.089622649%
jalview.ws.jws1.Discoverer   jalview.ws.jws1.Discoverer 0.0848484868.5%
jalview.ws2.client.ebi.JobDispatcherWSDiscoverer   jalview.ws2.client.ebi.JobDispatcherWSDiscoverer 0.081632658.2%
jalview.analysis.scoremodels.ScoreModels   jalview.analysis.scoremodels.ScoreModels 0.081632658.2%
jalview.io.FileFormats   jalview.io.FileFormats 0.088%
jalview.ws.jws2.jabaws2.Jws2Instance   jalview.ws.jws2.jabaws2.Jws2Instance 0.076923087.7%
jalview.ws2.client.api.AbstractWebServiceDiscoverer   jalview.ws2.client.api.AbstractWebServiceDiscoverer 0.07547177.5%
jalview.analysis.scoremodels.ScoreMatrix   jalview.analysis.scoremodels.ScoreMatrix 0.0617283966.2%
ext.vamsas.ServiceHandle   ext.vamsas.ServiceHandle 0.061224496.1%
jalview.ws2.params.SimpleParamDatastore   jalview.ws2.params.SimpleParamDatastore 0.055%
jalview.ws.jws2.JabaParamStore   jalview.ws.jws2.JabaParamStore 0.0416666684.2%
jalview.ws.jws2.Jws2ClientFactory   jalview.ws.jws2.Jws2ClientFactory 0.044%
jalview.workers.InformationThread   jalview.workers.InformationThread 0.0370370373.7%
jalview.datamodel.Sequence   jalview.datamodel.Sequence 0.0351464453.5%
jalview.bin.Cache   jalview.bin.Cache 0.0311653113.1%
jalview.ws.jws1.JPredClient   jalview.ws.jws1.JPredClient 0.0310559013.1%
jalview.ws.jws2.Jws2Discoverer   jalview.ws.jws2.Jws2Discoverer 0.0288461542.9%
jalview.io.FileFormat   jalview.io.FileFormat 0.0268456382.7%
jalview.gui.AlignFrame   jalview.gui.AlignFrame 0.0206637442.1%
jalview.structure.StructureSelectionManager   jalview.structure.StructureSelectionManager 0.0204865562%
jalview.gui.AlignmentPanel   jalview.gui.AlignmentPanel 0.0147835271.5%
jalview.datamodel.Alignment   jalview.datamodel.Alignment 0.013380911.3%
jalview.datamodel.features.SequenceFeatures   jalview.datamodel.features.SequenceFeatures 0.0127388541.3%
jalview.util.Comparison   jalview.util.Comparison 0.0078740160.8%
jalview.analysis.AlignmentUtils   jalview.analysis.AlignmentUtils 0.0071942450.7%
jalview.viewmodel.AlignmentViewport   jalview.viewmodel.AlignmentViewport 0.0065573770.7%
jalview.bin.Jalview   jalview.bin.Jalview 0.00564971750.6%
jalview.util.Platform   jalview.util.Platform 0.0049504950.5%
jalview.gui.AlignViewport   jalview.gui.AlignViewport 0.00461893760.5%
jalview.datamodel.AlignmentAnnotation   jalview.datamodel.AlignmentAnnotation 0.00257400260.3%
jalview.gui.Desktop   jalview.gui.Desktop 0.00166852060.2%