|
jalview.datamodel.ResidueCount.SymbolCounts
jalview.datamodel.ResidueCount.SymbolCounts
|
1.0100%
|
|
|
jalview.analysis.Conservation
jalview.analysis.Conservation
|
0.8719806787.2%
|
|
|
com.stevesoft.pat.Rthings
com.stevesoft.pat.Rthings
|
0.8461538684.6%
|
|
|
jalview.workers.ConservationThread
jalview.workers.ConservationThread
|
0.595238159.5%
|
|
|
com.stevesoft.pat.StrPos
com.stevesoft.pat.StrPos
|
0.550%
|
|
|
com.stevesoft.pat.wrap.StringWrap
com.stevesoft.pat.wrap.StringWrap
|
0.550%
|
|
|
com.stevesoft.pat.oneChar
com.stevesoft.pat.oneChar
|
0.485714348.6%
|
|
|
jalview.analysis.Finder
jalview.analysis.Finder
|
0.4436363644.4%
|
|
|
jalview.datamodel.ResidueCount
jalview.datamodel.ResidueCount
|
0.4285714342.9%
|
|
|
jalview.util.SparseCount
jalview.util.SparseCount
|
0.440%
|
|
|
jalview.workers.ConsensusThread
jalview.workers.ConsensusThread
|
0.387538.7%
|
|
|
jalview.bin.ApplicationSingletonProvider
jalview.bin.ApplicationSingletonProvider
|
0.3428571534.3%
|
|
|
jalview.datamodel.SearchResults.Match
jalview.datamodel.SearchResults.Match
|
0.2878787828.8%
|
|
|
com.stevesoft.pat.Pattern
com.stevesoft.pat.Pattern
|
0.2430555524.3%
|
|
|
jalview.ext.android.SparseShortArray
jalview.ext.android.SparseShortArray
|
0.225988722.6%
|
|
|
jalview.workers.AlignCalcManager2.SimpleWorkerManager
jalview.workers.AlignCalcManager2.SimpleWorkerManager
|
0.2142857221.4%
|
|
|
com.stevesoft.pat.Regex
com.stevesoft.pat.Regex
|
0.1845454618.5%
|
|
|
jalview.workers.AlignCalcManager2.WorkerManager
jalview.workers.AlignCalcManager2.WorkerManager
|
0.1666666716.7%
|
|
|
jalview.analysis.AnnotationSorter
jalview.analysis.AnnotationSorter
|
0.132812513.3%
|
|
|
jalview.util.Format
jalview.util.Format
|
0.12629412.6%
|
|
|
jalview.datamodel.Profile
jalview.datamodel.Profile
|
0.11475409611.5%
|
|
|
jalview.datamodel.Annotation
jalview.datamodel.Annotation
|
0.11428571511.4%
|
|
|
jalview.ext.android.ContainerHelpers
jalview.ext.android.ContainerHelpers
|
0.1111111111.1%
|
|
|
com.stevesoft.pat.parsePerl
com.stevesoft.pat.parsePerl
|
0.098639469.9%
|
|
|
jalview.analysis.scoremodels.ScoreModels
jalview.analysis.scoremodels.ScoreModels
|
0.081632658.2%
|
|
|
com.stevesoft.pat.RegRes
com.stevesoft.pat.RegRes
|
0.079710158%
|
|
|
jalview.bin.Console
jalview.bin.Console
|
0.0707547147.1%
|
|
|
jalview.datamodel.SearchResults
jalview.datamodel.SearchResults
|
0.0705128247.1%
|
|
|
jalview.log.JLogger
jalview.log.JLogger
|
0.065934076.6%
|
|
|
jalview.analysis.scoremodels.ScoreMatrix
jalview.analysis.scoremodels.ScoreMatrix
|
0.0617283966.2%
|
|
|
jalview.analysis.AAFrequency
jalview.analysis.AAFrequency
|
0.0554649275.5%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.0476987444.8%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.0472440944.7%
|
|
|
com.stevesoft.pat.patInt
com.stevesoft.pat.patInt
|
0.03753.8%
|
|
|
jalview.util.Platform
jalview.util.Platform
|
0.0272277222.7%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.0223015172.2%
|
|
|
jalview.structure.StructureSelectionManager
jalview.structure.StructureSelectionManager
|
0.0204865562%
|
|
|
jalview.viewmodel.AlignmentViewport
jalview.viewmodel.AlignmentViewport
|
0.0183606561.8%
|
|
|
jalview.gui.AlignmentPanel
jalview.gui.AlignmentPanel
|
0.016895461.7%
|
|
|
jalview.analysis.AlignSeq
jalview.analysis.AlignSeq
|
0.01275510251.3%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.0127388541.3%
|
|
|
jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
|
0.0117924531.2%
|
|
|
jalview.bin.Jalview
jalview.bin.Jalview
|
0.00564971750.6%
|
|
|
jalview.gui.AlignViewport
jalview.gui.AlignViewport
|
0.00461893760.5%
|
|
|
com.stevesoft.pat.CaseMgr
com.stevesoft.pat.CaseMgr
|
0.00278551530.3%
|
|
|
jalview.datamodel.AlignmentAnnotation
jalview.datamodel.AlignmentAnnotation
|
0.00257400260.3%
|
|
|
jalview.gui.Desktop
jalview.gui.Desktop
|
0.00166852060.2%
|
|
