Clover icon

Coverage Report

Class AlignmentTest

 
AlignmentTest 3333 00 00 0.031
1.0100%
 
AlignmentTest.testAlignAs_dnaAsDnaAlignmentTest.testAlignAs_dnaAsDna 177989935620827 May 17:29:16 1PASS 0.0010.001  
AlignmentTest.testFindAnnotations_bySeqLabelandorCalcIdAlignmentTest.testFindAnnotations_bySeqLabelandorCalcId 177989935628227 May 17:29:16 1PASS 0.00  
AlignmentTest.testFindOrCreateForNullCalcIdAlignmentTest.testFindOrCreateForNullCalcId 177989935628827 May 17:29:16 1PASS 0.00  
AlignmentTest.testAlignAs_cdnaAsProtein_singleSequenceAlignmentTest.testAlignAs_cdnaAsProtein_singleSequence 177989935620327 May 17:29:16 1PASS 0.0010.001  
AlignmentTest.testVerifyAlignmentDatasetRefsAlignmentTest.testVerifyAlignmentDatasetRefs 177989935632527 May 17:29:16 1PASS 0.0040.004  
AlignmentTest.testAssertDatasetIsNormalisedAlignmentTest.testAssertDatasetIsNormalised 177989935622027 May 17:29:16 1PASS 0.0030.003  
AlignmentTest.testDeleteSequenceBySeqAlignmentTest.testDeleteSequenceBySeq 177989935627227 May 17:29:16 1PASS 0.00  
AlignmentTest.testCreateDataset_updateDbrefMappingsAlignmentTest.testCreateDataset_updateDbrefMappings 177989935623627 May 17:29:16 1PASS 0.00  
AlignmentTest.testCopyConstructorAlignmentTest.testCopyConstructor 177989935622627 May 17:29:16 1PASS 0.00  
AlignmentTest.testAlignAs_cdnaAsProteinAlignmentTest.testAlignAs_cdnaAsProtein 177989935619927 May 17:29:16 1PASS 0.0010.001  
AlignmentTest.testDeleteAllAnnotations_excludingAutocalculatedAlignmentTest.testDeleteAllAnnotations_excludingAutocalculated 177989935623927 May 17:29:16 1PASS 0.00  
AlignmentTest.testDeleteAllAnnotations_includingAutocalculatedAlignmentTest.testDeleteAllAnnotations_includingAutocalculated 177989935624327 May 17:29:16 1PASS 0.0160.016  
AlignmentTest.testEqualsAlignmentTest.testEquals 177989935627527 May 17:29:16 1PASS 0.00  
AlignmentTest.testAlignAs_proteinAsCdnaAlignmentTest.testAlignAs_proteinAsCdna 177989935621227 May 17:29:16 1PASS 0.00  
AlignmentTest.testIsSecondaryStructurePresentAlignmentTest.testIsSecondaryStructurePresent 177989935630127 May 17:29:16 1PASS 0.00  
AlignmentTest.testAddSequencePreserveDatasetIntegrityAlignmentTest.testAddSequencePreserveDatasetIntegrity 177989935619527 May 17:29:16 1PASS 0.00  
AlignmentTest.testPropagateInsertionsAlignmentTest.testPropagateInsertions 177989935630727 May 17:29:16 1PASS 0.0010.001  
AlignmentTest.testCreateDatasetAlignmentAlignmentTest.testCreateDatasetAlignment 177989935622927 May 17:29:16 1PASS 0.0010.001  
AlignmentTest.testFindAnnotation_byCalcIdAlignmentTest.testFindAnnotation_byCalcId 177989935627927 May 17:29:16 1PASS 0.00  
AlignmentTest.testCreateDatasetAlignmentWithMappedToSeqsAlignmentTest.testCreateDatasetAlignmentWithMappedToSeqs 177989935623227 May 17:29:16 1PASS 0.0010.001  
AlignmentTest.testSetHiddenColumnsAlignmentTest.testSetHiddenColumns 177989935631927 May 17:29:16 1PASS 0.00  
AlignmentTest.testGetContactMapAlignmentTest.testGetContactMap 177989935629127 May 17:29:16 1PASS 0.00  
AlignmentTest.testGetVisibleWidthAlignmentTest.testGetVisibleWidth 177989935629427 May 17:29:16 1PASS 0.00  
AlignmentTest.testAppendAlignmentTest.testAppend 177989935621627 May 17:29:16 1PASS 0.00  
AlignmentTest.testSetDataset_selfReferenceAlignmentTest.testSetDataset_selfReference 177989935631527 May 17:29:16 1PASS 0.00  
AlignmentTest.testPadGapsAlignmentTest.testPadGaps 177989935630427 May 17:29:16 1PASS 0.00  
AlignmentTest.testPropagateInsertionsOverlapAlignmentTest.testPropagateInsertionsOverlap 177989935631127 May 17:29:16 1PASS 0.0010.001  
AlignmentTest.testFindGroupAlignmentTest.testFindGroup 177989935628527 May 17:29:16 1PASS 0.00  
AlignmentTest.testDeleteSequenceByIndexAlignmentTest.testDeleteSequenceByIndex 177989935626827 May 17:29:16 1PASS 0.00  
AlignmentTest.testDeleteHiddenSequenceAlignmentTest.testDeleteHiddenSequence 177989935626327 May 17:29:16 1PASS 0.0010.001  
AlignmentTest.testUpdateFromOrAddAnnotationAlignmentTest.testUpdateFromOrAddAnnotation 177989935632227 May 17:29:16 1PASS 0.00  
AlignmentTest.testAddCodonFrameAlignmentTest.testAddCodonFrame 177989935619027 May 17:29:16 1PASS 0.00  
AlignmentTest.testGetWidthAlignmentTest.testGetWidth 177989935629727 May 17:29:16 1PASS 0.00