|
com.stevesoft.pat.patInf
com.stevesoft.pat.patInf
|
1.0100%
|
|
|
com.stevesoft.pat.Rthings
com.stevesoft.pat.Rthings
|
0.8461538684.6%
|
|
|
mc_view.Residue
mc_view.Residue
|
0.8461538684.6%
|
|
|
jalview.ws.jws2.jabaws2.Jws2InstanceFactory
jalview.ws.jws2.jabaws2.Jws2InstanceFactory
|
0.770%
|
|
|
com.stevesoft.pat.oneChar
com.stevesoft.pat.oneChar
|
0.6285714562.9%
|
|
|
jalview.util.CaseInsensitiveString
jalview.util.CaseInsensitiveString
|
0.565217456.5%
|
|
|
com.stevesoft.pat.OrMark
com.stevesoft.pat.OrMark
|
0.5555%
|
|
|
com.stevesoft.pat.StrPos
com.stevesoft.pat.StrPos
|
0.523255852.3%
|
|
|
jalview.ws.jws2.jabaws2.Jws2Instance
jalview.ws.jws2.jabaws2.Jws2Instance
|
0.5057471450.6%
|
|
|
mc_view.Bond
mc_view.Bond
|
0.550%
|
|
|
com.stevesoft.pat.wrap.StringWrap
com.stevesoft.pat.wrap.StringWrap
|
0.550%
|
|
|
jalview.ext.jmol.JmolParser
jalview.ext.jmol.JmolParser
|
0.498701349.9%
|
|
|
jalview.gui.SplashScreen.SplashImage
jalview.gui.SplashScreen.SplashImage
|
0.4705882447.1%
|
|
|
mc_view.PDBChain
mc_view.PDBChain
|
0.4603174646%
|
|
|
jalview.analysis.AlignSeq
jalview.analysis.AlignSeq
|
0.4438775544.4%
|
|
|
jalview.io.StructureFile
jalview.io.StructureFile
|
0.440%
|
|
|
jalview.log.JalviewAppender
jalview.log.JalviewAppender
|
0.388888938.9%
|
|
|
jalview.util.Format
jalview.util.Format
|
0.345755734.6%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.3149606331.5%
|
|
|
jalview.datamodel.SequenceFeature
jalview.datamodel.SequenceFeature
|
0.305755430.6%
|
|
|
com.stevesoft.pat.Pattern
com.stevesoft.pat.Pattern
|
0.3055555530.6%
|
|
|
com.stevesoft.pat.Regex
com.stevesoft.pat.Regex
|
0.2929%
|
|
|
jalview.datamodel.Annotation
jalview.datamodel.Annotation
|
0.285714328.6%
|
|
|
jalview.structure.StructureImportSettings
jalview.structure.StructureImportSettings
|
0.285714328.6%
|
|
|
mc_view.Atom
mc_view.Atom
|
0.282051328.2%
|
|
|
jalview.datamodel.AlignmentAnnotation
jalview.datamodel.AlignmentAnnotation
|
0.2693236826.9%
|
|
|
com.stevesoft.pat.Multi
com.stevesoft.pat.Multi
|
0.2692307826.9%
|
|
|
com.stevesoft.pat.Or
com.stevesoft.pat.Or
|
0.2692307826.9%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.2478559224.8%
|
|
|
jalview.datamodel.SequenceCursor
jalview.datamodel.SequenceCursor
|
0.2333333323.3%
|
|
|
com.stevesoft.pat.Range
com.stevesoft.pat.Range
|
0.2272727322.7%
|
|
|
jalview.ws.jws2.JabaPreset
jalview.ws.jws2.JabaPreset
|
0.2272727322.7%
|
|
|
com.stevesoft.pat.Bracket
com.stevesoft.pat.Bracket
|
0.22522.5%
|
|
|
jalview.datamodel.features.FeatureAttributes
jalview.datamodel.features.FeatureAttributes
|
0.224806222.5%
|
|
|
jalview.datamodel.features.FeatureStore
jalview.datamodel.features.FeatureStore
|
0.220543822.1%
|
|
|
jalview.ws.jws2.JabaWsServerQuery
jalview.ws.jws2.JabaWsServerQuery
|
0.2187521.9%
|
|
|
jalview.datamodel.PDBEntry
jalview.datamodel.PDBEntry
|
0.2135231321.4%
|
|
|
jalview.datamodel.features.FeatureAttributes.AttributeData
jalview.datamodel.features.FeatureAttributes.AttributeData
|
0.2127659621.3%
|
|
|
jalview.structure.StructureSelectionManager
jalview.structure.StructureSelectionManager
|
0.2051282120.5%
|
|
|
com.stevesoft.pat.patInt
com.stevesoft.pat.patInt
|
0.220%
|
|
|
jalview.io.AlignFile
jalview.io.AlignFile
|
0.1986301419.9%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.191082819.1%
|
|
|
jalview.io.FileParse
jalview.io.FileParse
|
0.180055418%
|
|
|
jalview.analysis.scoremodels.ScoreModels
jalview.analysis.scoremodels.ScoreModels
|
0.1730769317.3%
|
|
|
com.stevesoft.pat.RegOpt
com.stevesoft.pat.RegOpt
|
0.1726618717.3%
|
|
|
com.stevesoft.pat.Multi_stage2
com.stevesoft.pat.Multi_stage2
|
0.1555555615.6%
|
|
|
jalview.log.JLogger
jalview.log.JLogger
|
0.1428571514.3%
|
|
|
jalview.ws.jws2.JabaParamStore
jalview.ws.jws2.JabaParamStore
|
0.14062514.1%
|
|
|
jalview.structure.StructureMapping
jalview.structure.StructureMapping
|
0.1139896411.4%
|
|
|
jalview.util.MapList
jalview.util.MapList
|
0.1138461511.4%
|
|
|
jalview.ws.sifts.SiftsSettings
jalview.ws.sifts.SiftsSettings
|
0.1111111111.1%
|
|
|
jalview.log.JLoggerLog4j
jalview.log.JLoggerLog4j
|
0.10679611610.7%
|
|
|
jalview.datamodel.Mapping
jalview.datamodel.Mapping
|
0.10389610410.4%
|
|
|
com.stevesoft.pat.parsePerl
com.stevesoft.pat.parsePerl
|
0.098639469.9%
|
|
|
jalview.gui.SplashScreen
jalview.gui.SplashScreen
|
0.0974025959.7%
|
|
|
jalview.gui.Desktop.MyDesktopPane
jalview.gui.Desktop.MyDesktopPane
|
0.09523819.5%
|
|
|
jalview.gui.Console
jalview.gui.Console
|
0.082568818.3%
|
|
|
com.stevesoft.pat.FastMulti
com.stevesoft.pat.FastMulti
|
0.0740740757.4%
|
|
|
jalview.bin.Console
jalview.bin.Console
|
0.068965526.9%
|
|
|
jalview.datamodel.DBRefEntry
jalview.datamodel.DBRefEntry
|
0.0616438356.2%
|
|
|
jalview.datamodel.ContactMapHolder
jalview.datamodel.ContactMapHolder
|
0.0576923085.8%
|
|
|
jalview.analysis.scoremodels.ScoreMatrix
jalview.analysis.scoremodels.ScoreMatrix
|
0.0576131685.8%
|
|
|
jalview.datamodel.annotations.AnnotationRowBuilder
jalview.datamodel.annotations.AnnotationRowBuilder
|
0.0512820525.1%
|
|
|
jalview.ws.jws2.Jws2Discoverer
jalview.ws.jws2.Jws2Discoverer
|
0.0455445544.6%
|
|
|
jalview.io.AppletFormatAdapter
jalview.io.AppletFormatAdapter
|
0.043478264.3%
|
|
|
jalview.gui.WsParamSetManager
jalview.gui.WsParamSetManager
|
0.0429447854.3%
|
|
|
jalview.bin.Cache
jalview.bin.Cache
|
0.0316804423.2%
|
|
|
com.stevesoft.pat.RegRes
com.stevesoft.pat.RegRes
|
0.0289855082.9%
|
|
|
jalview.ws.seqfetcher.DbSourceProxyImpl
jalview.ws.seqfetcher.DbSourceProxyImpl
|
0.0270270282.7%
|
|
|
jalview.util.Platform
jalview.util.Platform
|
0.0188679251.9%
|
|
|
jalview.ws.dbsources.EBIAlfaFold
jalview.ws.dbsources.EBIAlfaFold
|
0.0184615381.8%
|
|
|
jalview.gui.Desktop
jalview.gui.Desktop
|
0.0119318181.2%
|
|
|
jalview.ext.jmol.JalviewJmolBinding
jalview.ext.jmol.JalviewJmolBinding
|
0.0040160640.4%
|
|
|
com.stevesoft.pat.CaseMgr
com.stevesoft.pat.CaseMgr
|
0.00278551530.3%
|
|
|
jalview.schemes.ResidueProperties
jalview.schemes.ResidueProperties
|
0.00105042020.1%
|
|
