|
jalview.schemes.ClustalxColourScheme.ConsensusColour
jalview.schemes.ClustalxColourScheme.ConsensusColour
|
1.0100%
|
|
|
jalview.datamodel.Profiles
jalview.datamodel.Profiles
|
0.866666786.7%
|
|
|
jalview.workers.ConsensusThread
jalview.workers.ConsensusThread
|
0.77577.5%
|
|
|
jalview.workers.SecondaryStructureConsensusThread
jalview.workers.SecondaryStructureConsensusThread
|
0.735849173.6%
|
|
|
jalview.datamodel.Profile
jalview.datamodel.Profile
|
0.672131167.2%
|
|
|
jalview.schemes.ClustalxColourScheme
jalview.schemes.ClustalxColourScheme
|
0.6271186562.7%
|
|
|
jalview.schemes.HydrophobicColourScheme
jalview.schemes.HydrophobicColourScheme
|
0.660%
|
|
|
jalview.schemes.HelixColourScheme
jalview.schemes.HelixColourScheme
|
0.660%
|
|
|
jalview.schemes.TurnColourScheme
jalview.schemes.TurnColourScheme
|
0.660%
|
|
|
jalview.schemes.StrandColourScheme
jalview.schemes.StrandColourScheme
|
0.660%
|
|
|
jalview.schemes.BuriedColourScheme
jalview.schemes.BuriedColourScheme
|
0.660%
|
|
|
jalview.schemes.ScoreColourScheme
jalview.schemes.ScoreColourScheme
|
0.562556.2%
|
|
|
jalview.schemes.TaylorColourScheme
jalview.schemes.TaylorColourScheme
|
0.550%
|
|
|
jalview.schemes.ZappoColourScheme
jalview.schemes.ZappoColourScheme
|
0.550%
|
|
|
jalview.schemes.PurinePyrimidineColourScheme
jalview.schemes.PurinePyrimidineColourScheme
|
0.550%
|
|
|
jalview.schemes.NucleotideColourScheme
jalview.schemes.NucleotideColourScheme
|
0.550%
|
|
|
jalview.schemes.Consensus
jalview.schemes.Consensus
|
0.4545454745.5%
|
|
|
jalview.bin.ApplicationSingletonProvider
jalview.bin.ApplicationSingletonProvider
|
0.4285714342.9%
|
|
|
jalview.datamodel.HiddenCursorPosition
jalview.datamodel.HiddenCursorPosition
|
0.4285714342.9%
|
|
|
jalview.schemes.UserColourScheme
jalview.schemes.UserColourScheme
|
0.3963414739.6%
|
|
|
jalview.schemes.ColourSchemeProperty
jalview.schemes.ColourSchemeProperty
|
0.388888938.9%
|
|
|
jalview.schemes.ResidueColourScheme
jalview.schemes.ResidueColourScheme
|
0.3095238231%
|
|
|
jalview.analysis.AAFrequency
jalview.analysis.AAFrequency
|
0.2740619827.4%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.2716535327.2%
|
|
|
jalview.datamodel.ResidueCount
jalview.datamodel.ResidueCount
|
0.2439024424.4%
|
|
|
jalview.util.ColorUtils
jalview.util.ColorUtils
|
0.2292817722.9%
|
|
|
jalview.workers.AlignCalcManager2.SimpleWorkerManager
jalview.workers.AlignCalcManager2.SimpleWorkerManager
|
0.2142857221.4%
|
|
|
jalview.schemes.TCoffeeColourScheme
jalview.schemes.TCoffeeColourScheme
|
0.2131147521.3%
|
|
|
jalview.workers.AlignCalcManager2.WorkerManager
jalview.workers.AlignCalcManager2.WorkerManager
|
0.1666666716.7%
|
|
|
jalview.schemes.ColourSchemes
jalview.schemes.ColourSchemes
|
0.1666666716.7%
|
|
|
jalview.schemes.RNAHelicesColour
jalview.schemes.RNAHelicesColour
|
0.1506849415.1%
|
|
|
jalview.analysis.AnnotationSorter
jalview.analysis.AnnotationSorter
|
0.132812513.3%
|
|
|
jalview.bin.Console
jalview.bin.Console
|
0.1226415112.3%
|
|
|
jalview.schemes.Blosum62ColourScheme
jalview.schemes.Blosum62ColourScheme
|
0.1176470611.8%
|
|
|
jalview.datamodel.Annotation
jalview.datamodel.Annotation
|
0.11428571511.4%
|
|
|
jalview.schemes.PIDColourScheme
jalview.schemes.PIDColourScheme
|
0.110%
|
|
|
jalview.ws.api.UIinfo
jalview.ws.api.UIinfo
|
0.0784313757.8%
|
|
|
jalview.ws.jws2.jabaws2.Jws2Instance
jalview.ws.jws2.jabaws2.Jws2Instance
|
0.076923087.7%
|
|
|
jalview.ws.jws2.JabaParamStore
jalview.ws.jws2.JabaParamStore
|
0.0729166647.3%
|
|
|
jalview.log.JLogger
jalview.log.JLogger
|
0.065934076.6%
|
|
|
jalview.ws.api.ServiceWithParameters
jalview.ws.api.ServiceWithParameters
|
0.06256.2%
|
|
|
jalview.viewmodel.AlignmentViewport
jalview.viewmodel.AlignmentViewport
|
0.0504918025%
|
|
|
jalview.datamodel.SecondaryStructureCount
jalview.datamodel.SecondaryStructureCount
|
0.0468754.7%
|
|
|
jalview.gui.AlignmentPanel
jalview.gui.AlignmentPanel
|
0.0454065464.5%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.0451882854.5%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.0446030354.5%
|
|
|
jalview.gui.WsParamSetManager
jalview.gui.WsParamSetManager
|
0.0429447854.3%
|
|
|
jalview.workers.InformationThread
jalview.workers.InformationThread
|
0.0370370373.7%
|
|
|
jalview.util.StringUtils
jalview.util.StringUtils
|
0.0367231633.7%
|
|
|
jalview.analysis.AlignmentAnnotationUtils
jalview.analysis.AlignmentAnnotationUtils
|
0.0296610173%
|
|
|
jalview.renderer.ResidueShader
jalview.renderer.ResidueShader
|
0.0243902432.4%
|
|
|
jalview.gui.AnnotationPanel
jalview.gui.AnnotationPanel
|
0.0237849022.4%
|
|
|
jalview.util.Format
jalview.util.Format
|
0.0227743282.3%
|
|
|
jalview.viewmodel.styles.ViewStyle
jalview.viewmodel.styles.ViewStyle
|
0.021739132.2%
|
|
|
jalview.bin.Cache
jalview.bin.Cache
|
0.0216802172.2%
|
|
|
jalview.structure.StructureSelectionManager
jalview.structure.StructureSelectionManager
|
0.0204865562%
|
|
|
jalview.datamodel.HiddenColumnsCursor
jalview.datamodel.HiddenColumnsCursor
|
0.0156251.6%
|
|
|
jalview.analysis.AlignmentUtils
jalview.analysis.AlignmentUtils
|
0.0130975771.3%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.0127388541.3%
|
|
|
jalview.util.Platform
jalview.util.Platform
|
0.0123762381.2%
|
|
|
jalview.ws.jws2.Jws2Discoverer
jalview.ws.jws2.Jws2Discoverer
|
0.0096153851%
|
|
|
jalview.datamodel.AlignmentAnnotation
jalview.datamodel.AlignmentAnnotation
|
0.0093786630.9%
|
|
|
jalview.gui.AlignViewport
jalview.gui.AlignViewport
|
0.0092378750.9%
|
|
|
jalview.datamodel.HiddenSequences
jalview.datamodel.HiddenSequences
|
0.009132420.9%
|
|
|
jalview.gui.IdPanel
jalview.gui.IdPanel
|
0.008968610.9%
|
|
|
jalview.bin.Jalview
jalview.bin.Jalview
|
0.0088781280.9%
|
|
|
jalview.bin.argparser.BootstrapArgs
jalview.bin.argparser.BootstrapArgs
|
0.0082644620.8%
|
|
|
jalview.gui.IdCanvas
jalview.gui.IdCanvas
|
0.0066445180.7%
|
|
|
jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
|
0.00235849060.2%
|
|
|
jalview.gui.Desktop
jalview.gui.Desktop
|
0.00166852060.2%
|
|
