|
jalview.datamodel.Profiles
jalview.datamodel.Profiles
|
0.866666786.7%
|
|
|
jalview.workers.ConsensusThread
jalview.workers.ConsensusThread
|
0.77577.5%
|
|
|
jalview.datamodel.features.FeatureSources
jalview.datamodel.features.FeatureSources
|
0.7575%
|
|
|
jalview.workers.SecondaryStructureConsensusThread
jalview.workers.SecondaryStructureConsensusThread
|
0.735849173.6%
|
|
|
jalview.datamodel.features.FeatureSource
jalview.datamodel.features.FeatureSource
|
0.7142857371.4%
|
|
|
jalview.ext.htsjdk.VCFReader
jalview.ext.htsjdk.VCFReader
|
0.674418667.4%
|
|
|
jalview.datamodel.Profile
jalview.datamodel.Profile
|
0.672131167.2%
|
|
|
jalview.io.vcf.VCFLoader.VCFMap
jalview.io.vcf.VCFLoader.VCFMap
|
0.660%
|
|
|
jalview.datamodel.features.FeatureAttributes.AttributeData
jalview.datamodel.features.FeatureAttributes.AttributeData
|
0.5636363656.4%
|
|
|
jalview.gui.SequenceRenderer
jalview.gui.SequenceRenderer
|
0.3990384639.9%
|
|
|
jalview.io.vcf.VCFLoader
jalview.io.vcf.VCFLoader
|
0.3758064537.6%
|
|
|
jalview.bin.ApplicationSingletonProvider
jalview.bin.ApplicationSingletonProvider
|
0.3428571534.3%
|
|
|
jalview.ext.htsjdk.HtsContigDb
jalview.ext.htsjdk.HtsContigDb
|
0.3076923230.8%
|
|
|
jalview.workers.AlignCalcManager2.SimpleWorkerManager
jalview.workers.AlignCalcManager2.SimpleWorkerManager
|
0.285714328.6%
|
|
|
jalview.analysis.AAFrequency
jalview.analysis.AAFrequency
|
0.2838499228.4%
|
|
|
jalview.renderer.ResidueColourFinder
jalview.renderer.ResidueColourFinder
|
0.2619047826.2%
|
|
|
jalview.renderer.AnnotationRendererFactory
jalview.renderer.AnnotationRendererFactory
|
0.2525%
|
|
|
jalview.schemes.NucleotideColourScheme
jalview.schemes.NucleotideColourScheme
|
0.2525%
|
|
|
jalview.datamodel.ResidueCount
jalview.datamodel.ResidueCount
|
0.2473867524.7%
|
|
|
jalview.ws.jws2.jabaws2.Jws2Instance
jalview.ws.jws2.jabaws2.Jws2Instance
|
0.2211538422.1%
|
|
|
jalview.datamodel.features.FeatureStore
jalview.datamodel.features.FeatureStore
|
0.220543822.1%
|
|
|
jalview.datamodel.features.FeatureAttributes
jalview.datamodel.features.FeatureAttributes
|
0.2183098621.8%
|
|
|
jalview.renderer.AnnotationRenderer
jalview.renderer.AnnotationRenderer
|
0.216856921.7%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.2101910921%
|
|
|
jalview.util.MapList
jalview.util.MapList
|
0.172817.3%
|
|
|
jalview.workers.AlignCalcManager2.WorkerManager
jalview.workers.AlignCalcManager2.WorkerManager
|
0.1666666716.7%
|
|
|
jalview.datamodel.SequenceFeature
jalview.datamodel.SequenceFeature
|
0.1546762615.5%
|
|
|
jalview.analysis.AnnotationSorter
jalview.analysis.AnnotationSorter
|
0.132812513.3%
|
|
|
jalview.workers.AlignCalcManager2
jalview.workers.AlignCalcManager2
|
0.1232876712.3%
|
|
|
jalview.datamodel.Annotation
jalview.datamodel.Annotation
|
0.11428571511.4%
|
|
|
jalview.gui.Desktop.MyDesktopPane
jalview.gui.Desktop.MyDesktopPane
|
0.09523819.5%
|
|
|
jalview.viewmodel.styles.ViewStyle
jalview.viewmodel.styles.ViewStyle
|
0.09420299.4%
|
|
|
jalview.ws.jws2.JabaParamStore
jalview.ws.jws2.JabaParamStore
|
0.0885416648.9%
|
|
|
jalview.viewmodel.AlignmentViewport
jalview.viewmodel.AlignmentViewport
|
0.084590178.5%
|
|
|
jalview.ws.api.UIinfo
jalview.ws.api.UIinfo
|
0.0784313757.8%
|
|
|
jalview.schemes.ResidueColourScheme
jalview.schemes.ResidueColourScheme
|
0.0714285757.1%
|
|
|
jalview.bin.Console
jalview.bin.Console
|
0.0707547147.1%
|
|
|
jalview.gui.SeqCanvas
jalview.gui.SeqCanvas
|
0.066801626.7%
|
|
|
jalview.gui.AnnotationPanel
jalview.gui.AnnotationPanel
|
0.066184076.6%
|
|
|
jalview.log.JLogger
jalview.log.JLogger
|
0.065934076.6%
|
|
|
jalview.ws.api.ServiceWithParameters
jalview.ws.api.ServiceWithParameters
|
0.06256.2%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.059055125.9%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.0518828445.2%
|
|
|
jalview.renderer.ResidueShader
jalview.renderer.ResidueShader
|
0.0487804864.9%
|
|
|
jalview.datamodel.SecondaryStructureCount
jalview.datamodel.SecondaryStructureCount
|
0.0468754.7%
|
|
|
jalview.workers.AlignCalcWorker
jalview.workers.AlignCalcWorker
|
0.0444444464.4%
|
|
|
jalview.util.ColorUtils
jalview.util.ColorUtils
|
0.0441988974.4%
|
|
|
jalview.gui.WsParamSetManager
jalview.gui.WsParamSetManager
|
0.0429447854.3%
|
|
|
jalview.util.StringUtils
jalview.util.StringUtils
|
0.0423728824.2%
|
|
|
jalview.gui.AlignmentPanel
jalview.gui.AlignmentPanel
|
0.042238654.2%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.041034794.1%
|
|
|
jalview.workers.InformationThread
jalview.workers.InformationThread
|
0.0370370373.7%
|
|
|
jalview.bin.Cache
jalview.bin.Cache
|
0.0352303533.5%
|
|
|
jalview.analysis.AlignmentAnnotationUtils
jalview.analysis.AlignmentAnnotationUtils
|
0.0296610173%
|
|
|
jalview.viewmodel.ViewportRanges
jalview.viewmodel.ViewportRanges
|
0.0264900662.6%
|
|
|
jalview.util.Format
jalview.util.Format
|
0.0227743282.3%
|
|
|
jalview.util.MappingUtils
jalview.util.MappingUtils
|
0.0224948882.2%
|
|
|
jalview.structure.StructureSelectionManager
jalview.structure.StructureSelectionManager
|
0.0204865562%
|
|
|
jalview.gui.AlignViewport
jalview.gui.AlignViewport
|
0.018475751.8%
|
|
|
jalview.datamodel.AlignmentAnnotation
jalview.datamodel.AlignmentAnnotation
|
0.016412661.6%
|
|
|
jalview.analysis.AlignmentUtils
jalview.analysis.AlignmentUtils
|
0.0130975771.3%
|
|
|
jalview.ws.jws2.Jws2Discoverer
jalview.ws.jws2.Jws2Discoverer
|
0.0128205131.3%
|
|
|
jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
|
0.0117924531.2%
|
|
|
jalview.gui.IdPanel
jalview.gui.IdPanel
|
0.008968610.9%
|
|
|
jalview.gui.Desktop
jalview.gui.Desktop
|
0.00611790870.6%
|
|
|
jalview.bin.Jalview
jalview.bin.Jalview
|
0.00564971750.6%
|
|
|
jalview.util.Platform
jalview.util.Platform
|
0.0049504950.5%
|
|
|
jalview.gui.AnnotationLabels
jalview.gui.AnnotationLabels
|
0.0019685040.2%
|
|
