|
jalview.datamodel.Profiles
jalview.datamodel.Profiles
|
0.866666786.7%
|
|
|
jalview.util.LinkedIdentityHashSet
jalview.util.LinkedIdentityHashSet
|
0.7727272577.3%
|
|
|
jalview.util.LinkedIdentityHashSet.IdentityWrapper
jalview.util.LinkedIdentityHashSet.IdentityWrapper
|
0.7142857371.4%
|
|
|
jalview.workers.SecondaryStructureConsensusThread
jalview.workers.SecondaryStructureConsensusThread
|
0.6747967667.5%
|
|
|
jalview.datamodel.AlignedCodonFrame.SequenceToSequenceMapping
jalview.datamodel.AlignedCodonFrame.SequenceToSequenceMapping
|
0.4910714349.1%
|
|
|
jalview.datamodel.RangeIterator
jalview.datamodel.RangeIterator
|
0.4594594545.9%
|
|
|
jalview.datamodel.HiddenCursorPosition
jalview.datamodel.HiddenCursorPosition
|
0.4285714342.9%
|
|
|
jalview.io.FastaFile
jalview.io.FastaFile
|
0.3603603536%
|
|
|
jalview.io.AlignFile
jalview.io.AlignFile
|
0.356164435.6%
|
|
|
jalview.datamodel.Profile
jalview.datamodel.Profile
|
0.3278688532.8%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.3110236231.1%
|
|
|
jalview.datamodel.SequenceCursor
jalview.datamodel.SequenceCursor
|
0.2333333323.3%
|
|
|
jalview.workers.AlignCalcManager
jalview.workers.AlignCalcManager
|
0.2261904822.6%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.2195540422%
|
|
|
jalview.gui.AlignViewport
jalview.gui.AlignViewport
|
0.2191780821.9%
|
|
|
jalview.util.MessageManager
jalview.util.MessageManager
|
0.190476219%
|
|
|
jalview.datamodel.SearchResults.Match
jalview.datamodel.SearchResults.Match
|
0.1818181918.2%
|
|
|
jalview.util.MapList
jalview.util.MapList
|
0.1738461617.4%
|
|
|
jalview.analysis.AAFrequency
jalview.analysis.AAFrequency
|
0.153996115.4%
|
|
|
jalview.util.MappingUtils
jalview.util.MappingUtils
|
0.1508620715.1%
|
|
|
jalview.io.FormatAdapter
jalview.io.FormatAdapter
|
0.1515%
|
|
|
jalview.viewmodel.styles.ViewStyle
jalview.viewmodel.styles.ViewStyle
|
0.1485507214.9%
|
|
|
jalview.datamodel.ColumnSelection.IntList
jalview.datamodel.ColumnSelection.IntList
|
0.1401869214%
|
|
|
jalview.io.FileParse
jalview.io.FileParse
|
0.1357340713.6%
|
|
|
jalview.analysis.AnnotationSorter
jalview.analysis.AnnotationSorter
|
0.132812513.3%
|
|
|
jalview.viewmodel.AlignmentViewport
jalview.viewmodel.AlignmentViewport
|
0.132219913.2%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.114889711.5%
|
|
|
jalview.schemes.ColourSchemeProperty
jalview.schemes.ColourSchemeProperty
|
0.1111111111.1%
|
|
|
jalview.datamodel.AlignedCodonFrame
jalview.datamodel.AlignedCodonFrame
|
0.0819112668.2%
|
|
|
jalview.datamodel.Annotation
jalview.datamodel.Annotation
|
0.0714285757.1%
|
|
|
jalview.datamodel.AlignmentAnnotation
jalview.datamodel.AlignmentAnnotation
|
0.067632856.8%
|
|
|
jalview.log.JLogger
jalview.log.JLogger
|
0.065934076.6%
|
|
|
jalview.io.AppletFormatAdapter
jalview.io.AppletFormatAdapter
|
0.065217396.5%
|
|
|
jalview.datamodel.SearchResults
jalview.datamodel.SearchResults
|
0.0576923085.8%
|
|
|
jalview.bin.Console
jalview.bin.Console
|
0.0492610824.9%
|
|
|
jalview.gui.AlignmentPanel
jalview.gui.AlignmentPanel
|
0.0482352934.8%
|
|
|
jalview.datamodel.SecondaryStructureCount
jalview.datamodel.SecondaryStructureCount
|
0.0468754.7%
|
|
|
jalview.datamodel.Mapping
jalview.datamodel.Mapping
|
0.0432900454.3%
|
|
|
jalview.renderer.ResidueShader
jalview.renderer.ResidueShader
|
0.0426829274.3%
|
|
|
jalview.bin.Cache
jalview.bin.Cache
|
0.0385674953.9%
|
|
|
jalview.util.Platform
jalview.util.Platform
|
0.033018873.3%
|
|
|
jalview.analysis.AlignmentAnnotationUtils
jalview.analysis.AlignmentAnnotationUtils
|
0.033018873.3%
|
|
|
jalview.io.FileFormat
jalview.io.FileFormat
|
0.029197082.9%
|
|
|
jalview.datamodel.ColumnSelection
jalview.datamodel.ColumnSelection
|
0.0240549842.4%
|
|
|
jalview.util.StringUtils
jalview.util.StringUtils
|
0.0206489672.1%
|
|
|
jalview.gui.Console
jalview.gui.Console
|
0.0206422022.1%
|
|
|
jalview.gui.AnnotationPanel
jalview.gui.AnnotationPanel
|
0.0199579842%
|
|
|
jalview.viewmodel.ViewportRanges
jalview.viewmodel.ViewportRanges
|
0.019801982%
|
|
|
jalview.util.ColorUtils
jalview.util.ColorUtils
|
0.0194986071.9%
|
|
|
jalview.analysis.AlignmentUtils
jalview.analysis.AlignmentUtils
|
0.0172872341.7%
|
|
|
jalview.structure.StructureSelectionManager
jalview.structure.StructureSelectionManager
|
0.0162094761.6%
|
|
|
jalview.datamodel.HiddenColumnsCursor
jalview.datamodel.HiddenColumnsCursor
|
0.0156251.6%
|
|
|
jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
|
0.0141509441.4%
|
|
|
jalview.analysis.AlignSeq
jalview.analysis.AlignSeq
|
0.01275510251.3%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.0127388541.3%
|
|
|
jalview.datamodel.HiddenSequences
jalview.datamodel.HiddenSequences
|
0.009132420.9%
|
|
|
jalview.gui.IdPanel
jalview.gui.IdPanel
|
0.008968610.9%
|
|
|
jalview.gui.IdCanvas
jalview.gui.IdCanvas
|
0.0070175440.7%
|
|
