Clover icon

Coverage Report

Test updateCacheTest

Test
updateCacheTest 1PASS 11 Feb 09:39:37 0.194
 
updateCacheTest
jalview.ws.WSClient   jalview.ws.WSClient 1.0100%
jalview.datamodel.ResidueCount.SymbolCounts   jalview.datamodel.ResidueCount.SymbolCounts 1.0100%
jalview.gui.ItemsRenderer   jalview.gui.ItemsRenderer 0.888888988.9%
jalview.structures.models.SequenceStructureBindingModel   jalview.structures.models.SequenceStructureBindingModel 0.7575%
jalview.analysis.Conservation   jalview.analysis.Conservation 0.748792374.9%
jalview.ws.SequenceFetcher   jalview.ws.SequenceFetcher 0.678571467.9%
jalview.workers.ConservationThread   jalview.workers.ConservationThread 0.5172413651.7%
jalview.gui.SplashScreen.SplashImage   jalview.gui.SplashScreen.SplashImage 0.4705882447.1%
jalview.ws.jws2.MsaWSClient   jalview.ws.jws2.MsaWSClient 0.4429530244.3%
jalview.ws.dbsources.EmblSource   jalview.ws.dbsources.EmblSource 0.440%
jalview.ws.rest.RestServiceDescription   jalview.ws.rest.RestServiceDescription 0.31531.5%
jalview.ws.jws2.SequenceAnnotationWSClient   jalview.ws.jws2.SequenceAnnotationWSClient 0.2903225729%
jalview.ws.dbsources.EmblCdsSource   jalview.ws.dbsources.EmblCdsSource 0.285714328.6%
jalview.util.MessageManager   jalview.util.MessageManager 0.285714328.6%
jalview.io.cache.JvCacheableInputBox   jalview.io.cache.JvCacheableInputBox 0.282608728.3%
jalview.ws.jws2.JabaPreset   jalview.ws.jws2.JabaPreset 0.2727272827.3%
jalview.ws.jws2.jabaws2.Jws2Instance   jalview.ws.jws2.jabaws2.Jws2Instance 0.2528735725.3%
jalview.ws.uimodel.AlignAnalysisUIText   jalview.ws.uimodel.AlignAnalysisUIText 0.2439024424.4%
jalview.ws.rest.params.Alignment   jalview.ws.rest.params.Alignment 0.2435897424.4%
jalview.ws.jws2.Jws2Discoverer   jalview.ws.jws2.Jws2Discoverer 0.2336633723.4%
jalview.ext.jmol.JalviewJmolBinding   jalview.ext.jmol.JalviewJmolBinding 0.2228915722.3%
jalview.ws.jws2.Jws2Client   jalview.ws.jws2.Jws2Client 0.2228915722.3%
jalview.log.JalviewAppender   jalview.log.JalviewAppender 0.2222222222.2%
jalview.io.cache.AppCache   jalview.io.cache.AppCache 0.2222222222.2%
jalview.gui.JvSwingUtils   jalview.gui.JvSwingUtils 0.2108843521.1%
jalview.ws.rest.InputType   jalview.ws.rest.InputType 0.2056074720.6%
jalview.workers.AlignCalcManager   jalview.workers.AlignCalcManager 0.190476219%
jalview.datamodel.ResidueCount   jalview.datamodel.ResidueCount 0.1781818117.8%
jalview.viewmodel.ViewportRanges   jalview.viewmodel.ViewportRanges 0.1716171717.2%
jalview.ws.jws1.WS1Client   jalview.ws.jws1.WS1Client 0.1616%
jalview.gui.BlogReader   jalview.gui.BlogReader 0.1408839814.1%
jalview.analysis.AnnotationSorter   jalview.analysis.AnnotationSorter 0.132812513.3%
jalview.util.Format   jalview.util.Format 0.12629412.6%
jalview.ws.rest.params.SeqGroupIndexVector   jalview.ws.rest.params.SeqGroupIndexVector 0.12408759412.4%
jalview.analysis.scoremodels.ScoreModels   jalview.analysis.scoremodels.ScoreModels 0.11538461611.5%
jalview.datamodel.Annotation   jalview.datamodel.Annotation 0.11428571511.4%
jalview.structures.models.AAStructureBindingModel   jalview.structures.models.AAStructureBindingModel 0.1114942511.1%
jalview.ws.rest.RestClient   jalview.ws.rest.RestClient 0.1111111111.1%
jalview.util.QuickSort   jalview.util.QuickSort 0.10679611610.7%
jalview.ws.rest.params.AnnotationFile   jalview.ws.rest.params.AnnotationFile 0.10256410410.3%
jalview.gui.Desktop.MyDesktopPane   jalview.gui.Desktop.MyDesktopPane 0.09523819.5%
jalview.util.StringUtils   jalview.util.StringUtils 0.094395289.4%
jalview.bin.Console   jalview.bin.Console 0.0935960569.4%
jalview.gui.Desktop.MyDesktopManager   jalview.gui.Desktop.MyDesktopManager 0.088888898.9%
jalview.log.JLogger   jalview.log.JLogger 0.087912098.8%
jalview.ws.dbsources.Xfam   jalview.ws.dbsources.Xfam 0.086956528.7%
jalview.gui.AppJmolBinding   jalview.gui.AppJmolBinding 0.084112158.4%
jalview.ext.ensembl.EnsemblSequenceFetcher   jalview.ext.ensembl.EnsemblSequenceFetcher 0.0833333368.3%
jalview.gui.Console   jalview.gui.Console 0.082568818.3%
jalview.io.FileFormats   jalview.io.FileFormats 0.088%
jalview.gui.StructureViewerBase   jalview.gui.StructureViewerBase 0.070707077.1%
jalview.analysis.scoremodels.ScoreMatrix   jalview.analysis.scoremodels.ScoreMatrix 0.0617283966.2%
ext.vamsas.ServiceHandle   ext.vamsas.ServiceHandle 0.061224496.1%
jalview.renderer.seqfeatures.FeatureColourFinder   jalview.renderer.seqfeatures.FeatureColourFinder 0.058823535.9%
jalview.ws.seqfetcher.ASequenceFetcher   jalview.ws.seqfetcher.ASequenceFetcher 0.0577777775.8%
jalview.ws.seqfetcher.DbSourceProxyImpl   jalview.ws.seqfetcher.DbSourceProxyImpl 0.0540540555.4%
jalview.gui.StructureChooser.PDBEntryTableModel   jalview.gui.StructureChooser.PDBEntryTableModel 0.052631585.3%
jalview.bin.Cache   jalview.bin.Cache 0.05234165.2%
jalview.ws.jws1.Discoverer   jalview.ws.jws1.Discoverer 0.0512820525.1%
jalview.gui.AlignFrame   jalview.gui.AlignFrame 0.043993234.4%
jalview.ws.dbsources.Pdb   jalview.ws.dbsources.Pdb 0.042553194.3%
jalview.ws.jws2.JabaParamStore   jalview.ws.jws2.JabaParamStore 0.0416666684.2%
jalview.ext.jmol.JmolCommands   jalview.ext.jmol.JmolCommands 0.038167943.8%
jalview.datamodel.Sequence   jalview.datamodel.Sequence 0.035162953.5%
jalview.gui.AlignmentPanel   jalview.gui.AlignmentPanel 0.0329411773.3%
jalview.ws.jws1.JPredClient   jalview.ws.jws1.JPredClient 0.0310559013.1%
jalview.io.FileFormat   jalview.io.FileFormat 0.029197082.9%
jalview.structure.StructureSelectionManager   jalview.structure.StructureSelectionManager 0.0286783042.9%
jalview.datamodel.PDBEntry   jalview.datamodel.PDBEntry 0.0249110312.5%
jalview.renderer.ResidueColourFinder   jalview.renderer.ResidueColourFinder 0.0238095242.4%
jalview.datamodel.Alignment   jalview.datamodel.Alignment 0.0220588242.2%
jalview.viewmodel.styles.ViewStyle   jalview.viewmodel.styles.ViewStyle 0.021739132.2%
jalview.util.DBRefUtils   jalview.util.DBRefUtils 0.0210843372.1%
jalview.viewmodel.AlignmentViewport   jalview.viewmodel.AlignmentViewport 0.0208768272.1%
jalview.gui.SplashScreen   jalview.gui.SplashScreen 0.0194805191.9%
jalview.ws.dbsources.Uniprot   jalview.ws.dbsources.Uniprot 0.0155642021.6%
jalview.gui.AppJmol   jalview.gui.AppJmol 0.0144927541.4%
jalview.gui.SequenceRenderer   jalview.gui.SequenceRenderer 0.0144230771.4%
jalview.datamodel.features.SequenceFeatures   jalview.datamodel.features.SequenceFeatures 0.0127388541.3%
jalview.jbgui.GStructureChooser   jalview.jbgui.GStructureChooser 0.009900991%
jalview.util.Platform   jalview.util.Platform 0.0094339620.9%
jalview.gui.SequenceFetcher   jalview.gui.SequenceFetcher 0.0085106380.9%
jalview.ext.ensembl.EnsemblGene   jalview.ext.ensembl.EnsemblGene 0.0081632650.8%
jalview.util.Comparison   jalview.util.Comparison 0.0078740160.8%
jalview.datamodel.HiddenColumns   jalview.datamodel.HiddenColumns 0.0047169810.5%
jalview.gui.AlignViewport   jalview.gui.AlignViewport 0.004566210.5%
jalview.gui.AnnotationPanel   jalview.gui.AnnotationPanel 0.0042016810.4%
jalview.bin.Jalview   jalview.bin.Jalview 0.00359712240.4%
jalview.gui.Desktop   jalview.gui.Desktop 0.0034090910.3%
jalview.datamodel.AlignmentAnnotation   jalview.datamodel.AlignmentAnnotation 0.0024154590.2%
jalview.gui.SeqCanvas   jalview.gui.SeqCanvas 0.0019960080.2%