|
jalview.renderer.ScaleRenderer.ScaleMark
jalview.renderer.ScaleRenderer.ScaleMark
|
1.0100%
|
|
|
jalview.datamodel.features.FeatureSources
jalview.datamodel.features.FeatureSources
|
0.7575%
|
|
|
jalview.datamodel.features.FeatureSource
jalview.datamodel.features.FeatureSource
|
0.7142857371.4%
|
|
|
jalview.ext.htsjdk.VCFReader
jalview.ext.htsjdk.VCFReader
|
0.674418667.4%
|
|
|
jalview.io.vcf.VCFLoader.VCFMap
jalview.io.vcf.VCFLoader.VCFMap
|
0.660%
|
|
|
jalview.util.ParseHtmlBodyAndLinks
jalview.util.ParseHtmlBodyAndLinks
|
0.594202959.4%
|
|
|
jalview.datamodel.features.FeatureAttributes.AttributeData
jalview.datamodel.features.FeatureAttributes.AttributeData
|
0.5636363656.4%
|
|
|
jalview.renderer.ScaleRenderer
jalview.renderer.ScaleRenderer
|
0.5656%
|
|
|
jalview.gui.SequenceRenderer
jalview.gui.SequenceRenderer
|
0.3990384639.9%
|
|
|
jalview.io.vcf.VCFLoader
jalview.io.vcf.VCFLoader
|
0.3758064537.6%
|
|
|
jalview.bin.ApplicationSingletonProvider
jalview.bin.ApplicationSingletonProvider
|
0.3428571534.3%
|
|
|
jalview.ext.htsjdk.HtsContigDb
jalview.ext.htsjdk.HtsContigDb
|
0.3076923230.8%
|
|
|
jalview.renderer.ResidueColourFinder
jalview.renderer.ResidueColourFinder
|
0.2619047826.2%
|
|
|
jalview.renderer.AnnotationRendererFactory
jalview.renderer.AnnotationRendererFactory
|
0.2525%
|
|
|
jalview.schemes.NucleotideColourScheme
jalview.schemes.NucleotideColourScheme
|
0.2525%
|
|
|
jalview.renderer.AnnotationRenderer
jalview.renderer.AnnotationRenderer
|
0.223880622.4%
|
|
|
jalview.gui.IdCanvas
jalview.gui.IdCanvas
|
0.2225913622.3%
|
|
|
jalview.log.JalviewAppender
jalview.log.JalviewAppender
|
0.2222222222.2%
|
|
|
jalview.datamodel.features.FeatureStore
jalview.datamodel.features.FeatureStore
|
0.220543822.1%
|
|
|
jalview.datamodel.features.FeatureAttributes
jalview.datamodel.features.FeatureAttributes
|
0.2183098621.8%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.2101910921%
|
|
|
jalview.viewmodel.ViewportRanges
jalview.viewmodel.ViewportRanges
|
0.1953642419.5%
|
|
|
jalview.gui.IdwidthAdjuster
jalview.gui.IdwidthAdjuster
|
0.1842105218.4%
|
|
|
jalview.gui.ScalePanel
jalview.gui.ScalePanel
|
0.1729323317.3%
|
|
|
jalview.util.MapList
jalview.util.MapList
|
0.172817.3%
|
|
|
jalview.gui.AnnotationLabels
jalview.gui.AnnotationLabels
|
0.1643700716.4%
|
|
|
jalview.datamodel.SequenceFeature
jalview.datamodel.SequenceFeature
|
0.1546762615.5%
|
|
|
jalview.workers.AlignCalcManager2
jalview.workers.AlignCalcManager2
|
0.1232876712.3%
|
|
|
jalview.viewmodel.styles.ViewStyle
jalview.viewmodel.styles.ViewStyle
|
0.1159420311.6%
|
|
|
jalview.gui.AnnotationPanel
jalview.gui.AnnotationPanel
|
0.077559467.8%
|
|
|
jalview.gui.SeqCanvas
jalview.gui.SeqCanvas
|
0.071862357.2%
|
|
|
jalview.workers.AlignCalcManager2.SimpleWorkerManager
jalview.workers.AlignCalcManager2.SimpleWorkerManager
|
0.0714285757.1%
|
|
|
jalview.schemes.ResidueColourScheme
jalview.schemes.ResidueColourScheme
|
0.0714285757.1%
|
|
|
jalview.gui.AlignmentPanel
jalview.gui.AlignmentPanel
|
0.0623020056.2%
|
|
|
jalview.viewmodel.AlignmentViewport
jalview.viewmodel.AlignmentViewport
|
0.0569620245.7%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.0518828445.2%
|
|
|
jalview.workers.AlignCalcWorker
jalview.workers.AlignCalcWorker
|
0.0444444464.4%
|
|
|
jalview.util.StringUtils
jalview.util.StringUtils
|
0.0423728824.2%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.0373333323.7%
|
|
|
jalview.bin.Cache
jalview.bin.Cache
|
0.0365853643.7%
|
|
|
jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
|
0.0353773573.5%
|
|
|
jalview.renderer.ResidueShader
jalview.renderer.ResidueShader
|
0.0243902432.4%
|
|
|
jalview.util.MappingUtils
jalview.util.MappingUtils
|
0.0216110012.2%
|
|
|
jalview.datamodel.ColumnSelection.IntList
jalview.datamodel.ColumnSelection.IntList
|
0.0186915881.9%
|
|
|
jalview.datamodel.HiddenSequences
jalview.datamodel.HiddenSequences
|
0.018264841.8%
|
|
|
jalview.gui.AlignViewport
jalview.gui.AlignViewport
|
0.0129589631.3%
|
|
|
jalview.datamodel.AlignmentAnnotation
jalview.datamodel.AlignmentAnnotation
|
0.0093786630.9%
|
|
|
jalview.gui.IdPanel
jalview.gui.IdPanel
|
0.008968610.9%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.0078740160.8%
|
|
|
jalview.datamodel.ColumnSelection
jalview.datamodel.ColumnSelection
|
0.00687285230.7%
|
|
|
jalview.util.Platform
jalview.util.Platform
|
0.0049504950.5%
|
|
|
jalview.bin.Jalview
jalview.bin.Jalview
|
0.003228410.3%
|
|
|
jalview.gui.AlignFrame
jalview.gui.AlignFrame
|
6.263702E-40.1%
|
|
