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Coverage Report

Test testParse_BSML

Test
testParse_BSML 1PASS 5 Jan 05:15:31 0.032
 
testParse_BSML
jalview.io.BSMLFile   jalview.io.BSMLFile 0.684782668.5%
jalview.ws.SequenceFetcher   jalview.ws.SequenceFetcher 0.6470588464.7%
jalview.util.ParseHtmlBodyAndLinks   jalview.util.ParseHtmlBodyAndLinks 0.594202959.4%
jalview.gui.SequenceRenderer   jalview.gui.SequenceRenderer 0.4663461446.6%
jalview.ws.jws2.MsaWSClient   jalview.ws.jws2.MsaWSClient 0.4605263246.1%
jalview.ws.api.UIinfo   jalview.ws.api.UIinfo 0.4313725543.1%
jalview.ws.dbsources.EmblSource   jalview.ws.dbsources.EmblSource 0.440%
jalview.renderer.ScaleRenderer   jalview.renderer.ScaleRenderer 0.3636%
jalview.renderer.ResidueColourFinder   jalview.renderer.ResidueColourFinder 0.3571428735.7%
jalview.bin.ApplicationSingletonProvider   jalview.bin.ApplicationSingletonProvider 0.3428571534.3%
jalview.ws.jws2.Jws2Client   jalview.ws.jws2.Jws2Client 0.3333333433.3%
jalview.ws.rest.RestServiceDescription   jalview.ws.rest.RestServiceDescription 0.3221649532.2%
jalview.gui.JvSwingUtils   jalview.gui.JvSwingUtils 0.2965517329.7%
jalview.ws.dbsources.EmblCdsSource   jalview.ws.dbsources.EmblCdsSource 0.285714328.6%
jalview.io.AlignFile   jalview.io.AlignFile 0.263513526.4%
jalview.gui.IdwidthAdjuster   jalview.gui.IdwidthAdjuster 0.263157926.3%
jalview.ws.jws2.JabaPreset   jalview.ws.jws2.JabaPreset 0.2525%
jalview.renderer.AnnotationRendererFactory   jalview.renderer.AnnotationRendererFactory 0.2525%
jalview.schemes.ZappoColourScheme   jalview.schemes.ZappoColourScheme 0.2525%
jalview.ws.jws2.Jws2ClientFactory   jalview.ws.jws2.Jws2ClientFactory 0.24824.8%
jalview.ws.rest.params.Alignment   jalview.ws.rest.params.Alignment 0.2435897424.4%
jalview.util.MessageManager   jalview.util.MessageManager 0.2380952423.8%
jalview.ws.WSClient   jalview.ws.WSClient 0.2352941223.5%
jalview.renderer.AnnotationRenderer   jalview.renderer.AnnotationRenderer 0.2326602323.3%
jalview.datamodel.features.SequenceFeatures   jalview.datamodel.features.SequenceFeatures 0.2292993722.9%
jalview.gui.IdCanvas   jalview.gui.IdCanvas 0.2225913622.3%
jalview.log.JalviewAppender   jalview.log.JalviewAppender 0.2222222222.2%
jalview.ws.api.ServiceWithParameters   jalview.ws.api.ServiceWithParameters 0.2083333320.8%
jalview.ws.rest.InputType   jalview.ws.rest.InputType 0.2056074720.6%
jalview.datamodel.features.FeatureStore   jalview.datamodel.features.FeatureStore 0.2024169120.2%
jalview.ws.uimodel.AlignAnalysisUIText   jalview.ws.uimodel.AlignAnalysisUIText 0.220%
jalview.viewmodel.ViewportRanges   jalview.viewmodel.ViewportRanges 0.1953642419.5%
jalview.gui.AnnotationLabels   jalview.gui.AnnotationLabels 0.1929133819.3%
jalview.workers.AlignCalcManager2   jalview.workers.AlignCalcManager2 0.1917808219.2%
jalview.gui.SeqCanvas   jalview.gui.SeqCanvas 0.1649797616.5%
jalview.analysis.AnnotationSorter   jalview.analysis.AnnotationSorter 0.1562515.6%
jalview.ws.jws2.PreferredServiceRegistry   jalview.ws.jws2.PreferredServiceRegistry 0.1481481514.8%
jalview.ws.rest.RestClient   jalview.ws.rest.RestClient 0.1466666614.7%
jalview.ws.rest.params.SeqGroupIndexVector   jalview.ws.rest.params.SeqGroupIndexVector 0.12408759412.4%
jalview.viewmodel.styles.ViewStyle   jalview.viewmodel.styles.ViewStyle 0.12318840612.3%
jalview.gui.ScalePanel   jalview.gui.ScalePanel 0.1215686312.2%
jalview.ws.rest.params.AnnotationFile   jalview.ws.rest.params.AnnotationFile 0.10256410410.3%
jalview.gui.Desktop.MyDesktopPane   jalview.gui.Desktop.MyDesktopPane 0.09523819.5%
jalview.datamodel.SequenceFeature   jalview.datamodel.SequenceFeature 0.093525189.4%
jalview.util.StringUtils   jalview.util.StringUtils 0.090395489%
jalview.ws.dbsources.Xfam   jalview.ws.dbsources.Xfam 0.086956528.7%
jalview.ext.ensembl.EnsemblSequenceFetcher   jalview.ext.ensembl.EnsemblSequenceFetcher 0.0833333368.3%
jalview.io.FileFormats   jalview.io.FileFormats 0.088%
jalview.gui.AnnotationPanel   jalview.gui.AnnotationPanel 0.0796277158%
jalview.gui.AlignmentPanel   jalview.gui.AlignmentPanel 0.07814157.8%
jalview.io.FileParse   jalview.io.FileParse 0.0775623257.8%
jalview.ws.jws2.jabaws2.Jws2Instance   jalview.ws.jws2.jabaws2.Jws2Instance 0.076923087.7%
jalview.workers.AlignCalcManager2.SimpleWorkerManager   jalview.workers.AlignCalcManager2.SimpleWorkerManager 0.0714285757.1%
jalview.schemes.ResidueColourScheme   jalview.schemes.ResidueColourScheme 0.0714285757.1%
jalview.viewmodel.AlignmentViewport   jalview.viewmodel.AlignmentViewport 0.064262296.4%
jalview.ws.seqfetcher.ASequenceFetcher   jalview.ws.seqfetcher.ASequenceFetcher 0.0577777775.8%
jalview.ws.seqfetcher.DbSourceProxyImpl   jalview.ws.seqfetcher.DbSourceProxyImpl 0.0540540555.4%
jalview.datamodel.Sequence   jalview.datamodel.Sequence 0.0510460255.1%
jalview.datamodel.Alignment   jalview.datamodel.Alignment 0.0481712744.8%
jalview.workers.AlignCalcWorker   jalview.workers.AlignCalcWorker 0.0444444464.4%
jalview.ws.jws2.SequenceAnnotationWSClient   jalview.ws.jws2.SequenceAnnotationWSClient 0.0442477874.4%
jalview.ws.jws2.JabaParamStore   jalview.ws.jws2.JabaParamStore 0.0416666684.2%
jalview.ws.dbsources.Pdb   jalview.ws.dbsources.Pdb 0.0408163264.1%
jalview.gui.AlignViewport   jalview.gui.AlignViewport 0.0323325623.2%
jalview.bin.Cache   jalview.bin.Cache 0.0311653113.1%
jalview.datamodel.SequenceGroup   jalview.datamodel.SequenceGroup 0.0289156622.9%
jalview.io.FileFormat   jalview.io.FileFormat 0.0275862072.8%
jalview.renderer.ResidueShader   jalview.renderer.ResidueShader 0.0243902432.4%
jalview.util.DBRefUtils   jalview.util.DBRefUtils 0.0208333342.1%
jalview.gui.AlignFrame   jalview.gui.AlignFrame 0.0206637442.1%
jalview.datamodel.ColumnSelection.IntList   jalview.datamodel.ColumnSelection.IntList 0.0186915881.9%
jalview.datamodel.HiddenSequences   jalview.datamodel.HiddenSequences 0.018264841.8%
jalview.datamodel.HiddenColumns   jalview.datamodel.HiddenColumns 0.0165094341.7%
jalview.ws.dbsources.Uniprot   jalview.ws.dbsources.Uniprot 0.015325671.5%
jalview.ws.jws2.Jws2Discoverer   jalview.ws.jws2.Jws2Discoverer 0.0128205131.3%
jalview.util.Platform   jalview.util.Platform 0.0123762381.2%
jalview.datamodel.AlignmentAnnotation   jalview.datamodel.AlignmentAnnotation 0.0117233291.2%
jalview.gui.IdPanel   jalview.gui.IdPanel 0.008968610.9%
jalview.ext.ensembl.EnsemblGene   jalview.ext.ensembl.EnsemblGene 0.0081632650.8%
jalview.util.Comparison   jalview.util.Comparison 0.0078740160.8%
jalview.bin.Jalview   jalview.bin.Jalview 0.00726392260.7%
jalview.analysis.AlignmentUtils   jalview.analysis.AlignmentUtils 0.00720366740.7%
jalview.datamodel.ColumnSelection   jalview.datamodel.ColumnSelection 0.00687285230.7%
jalview.gui.Desktop   jalview.gui.Desktop 0.006131550.6%