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Coverage Report

  1. Project Clover database Mon Jan 5 2026 05:12:18 GMT
  2. Package jalview.datamodel

Class SequenceTest

 
SequenceTest 5151 00 00 0.018
1.0100%
 
SequenceTest.testUpdatePDBIdsSequenceTest.testUpdatePDBIds 17675900811115 Jan 05:14:41 1PASS 0.0010.001  
SequenceTest.testCopyConstructor_noDatasetSequenceTest.testCopyConstructor_noDataset 17675900809455 Jan 05:14:40 1PASS 0.00  
SequenceTest.testGapMapSequenceTest.testGapMap 17675900810235 Jan 05:14:41 1PASS 0.00  
SequenceTest.testAddDBRefSequenceTest.testAddDBRef 17675900809185 Jan 05:14:40 1PASS 0.00  
SequenceTest.testInsertCharAtSequenceTest.testInsertCharAt 17675900810605 Jan 05:14:41 1PASS 0.00  
SequenceTest.testReplaceSequenceTest.testReplace 17675900810785 Jan 05:14:41 1PASS 0.00  
SequenceTest.testAddAlignmentAnnotationSequenceTest.testAddAlignmentAnnotation 17675900809095 Jan 05:14:40 1PASS 0.00  
SequenceTest.testTransferAnnotationSequenceTest.testTransferAnnotation 17675900811085 Jan 05:14:41 1PASS 0.00  
SequenceTest.testSetDatasetSequence_toSelfSequenceTest.testSetDatasetSequence_toSelf 17675900810885 Jan 05:14:41 1PASS 0.00  
SequenceTest.testFindIndex_withCursorSequenceTest.testFindIndex_withCursor 17675900810065 Jan 05:14:41 1PASS 0.0010.001  
SequenceTest.testGetRootDatasetSequence_datasetImplicit_returnDatasetSequenceTest.testGetRootDatasetSequence_datasetImplicit_returnDataset 17675900810465 Jan 05:14:41 1PASS 0.00  
SequenceTest.testFindPosition_withCursorAndEditsSequenceTest.testFindPosition_withCursorAndEdits 17675900810165 Jan 05:14:41 1PASS 0.0010.001  
SequenceTest.testFindPositionMapSequenceTest.testFindPositionMap 17675900810135 Jan 05:14:41 1PASS 0.00  
SequenceTest.testGetAnnotationSequenceTest.testGetAnnotation 17675900810345 Jan 05:14:41 1PASS 0.00  
SequenceTest.testCopyPasteStyleDerivesequence_withcontactMatrixAnnSequenceTest.testCopyPasteStyleDerivesequence_withcontactMatrixAnn 17675900809615 Jan 05:14:40 1PASS 0.00  
SequenceTest.testFindFeaturesSequenceTest.testFindFeatures 17675900810005 Jan 05:14:41 1PASS 0.0020.002  
SequenceTest.testSetDatasetSequence_cascadingSequenceTest.testSetDatasetSequence_cascading 17675900810805 Jan 05:14:41 1PASS 0.00  
SequenceTest.testDeleteCharsSequenceTest.testDeleteChars 17675900809665 Jan 05:14:40 1PASS 0.00  
SequenceTest.testGetPrimaryDBRefs_nucleotideSequenceTest.testGetPrimaryDBRefs_nucleotide 17675900810405 Jan 05:14:41 1PASS 0.0010.001  
SequenceTest.testGetSequenceSequenceTest.testGetSequence 17675900810535 Jan 05:14:41 1PASS 0.00  
SequenceTest.testGetRootDatasetSequence_datasetExplicit_returnDatasetSequenceTest.testGetRootDatasetSequence_datasetExplicit_returnDataset 17675900810445 Jan 05:14:41 1PASS 0.0010.001  
SequenceTest.testAddPDBIdSequenceTest.testAddPDBId 17675900809235 Jan 05:14:40 1PASS 0.0010.001  
SequenceTest.testCopyConstructor_withDatasetSequenceTest.testCopyConstructor_withDataset 17675900809475 Jan 05:14:40 1PASS 0.0010.001  
SequenceTest.testGetRootDatasetSequence_nestedDatasets_returnLastDatasetSequenceTest.testGetRootDatasetSequence_nestedDatasets_returnLastDataset 17675900810505 Jan 05:14:41 1PASS 0.00  
SequenceTest.testSetNameSequenceTest.testSetName 17675900810915 Jan 05:14:41 1PASS 0.00  
SequenceTest.testDeriveSequence_existingDatasetSequenceTest.testDeriveSequence_existingDataset 17675900809715 Jan 05:14:40 1PASS 0.0010.001  
SequenceTest.testIsProteinSequenceTest.testIsProtein 17675900810705 Jan 05:14:41 1PASS 0.00  
SequenceTest.testIsProteinWithXorNAmbiguityCodesSequenceTest.testIsProteinWithXorNAmbiguityCodes 17675900810725 Jan 05:14:41 1PASS 0.00  
SequenceTest.testFindPosition_withCursorSequenceTest.testFindPosition_withCursor 17675900810155 Jan 05:14:41 1PASS 0.00  
SequenceTest.testLocateVisibleStartofSequenceSequenceTest.testLocateVisibleStartofSequence 17675900810745 Jan 05:14:41 1PASS 0.0010.001  
SequenceTest.testGetPrimaryDBRefs_peptideSequenceTest.testGetPrimaryDBRefs_peptide 17675900810425 Jan 05:14:41 1PASS 0.0010.001  
SequenceTest.testInsertGapsAndGapmapsSequenceTest.testInsertGapsAndGapmaps 17675900810645 Jan 05:14:41 1PASS 0.00  
SequenceTest.testCheckValidRangeSequenceTest.testCheckValidRange 17675900809395 Jan 05:14:40 1PASS 0.0030.003  
SequenceTest.testDeriveSequence_noDatasetUngappedSequenceTest.testDeriveSequence_noDatasetUngapped 17675900809915 Jan 05:14:40 1PASS 0.00  
SequenceTest.testGetRootDatasetSequence_datasetIsNull_returnNullSequenceTest.testGetRootDatasetSequence_datasetIsNull_returnNull 17675900810495 Jan 05:14:41 1PASS 0.00  
SequenceTest.testGetSequenceFeaturesSequenceTest.testGetSequenceFeatures 17675900810555 Jan 05:14:41 1PASS 0.00  
SequenceTest.testGetStartGetEndSequenceTest.testGetStartGetEnd 17675900810575 Jan 05:14:41 1PASS 0.00  
SequenceTest.testDeleteChars_withGapsSequenceTest.testDeleteChars_withGaps 17675900809705 Jan 05:14:40 1PASS 0.00  
SequenceTest.testFindPositionSequenceTest.testFindPosition 17675900810095 Jan 05:14:41 1PASS 0.00  
SequenceTest.testGetAlignmentAnnotations_forCalcIdAndLabelSequenceTest.testGetAlignmentAnnotations_forCalcIdAndLabel 17675900810285 Jan 05:14:41 1PASS 0.00  
SequenceTest.testCreateDatasetSequenceSequenceTest.testCreateDatasetSequence 17675900809645 Jan 05:14:40 1PASS 0.00  
SequenceTest.testDeriveSequence_noDatasetGappedSequenceTest.testDeriveSequence_noDatasetGapped 17675900809815 Jan 05:14:40 1PASS 0.00  
SequenceTest.testGetAnnotation_forLabelSequenceTest.testGetAnnotation_forLabel 17675900810365 Jan 05:14:41 1PASS 0.00  
SequenceTest.testDeleteChars_withDbRefsAndFeaturesSequenceTest.testDeleteChars_withDbRefsAndFeatures 17675900809685 Jan 05:14:40 1PASS 0.00  
SequenceTest.testFindIndexSequenceTest.testFindIndex 17675900810045 Jan 05:14:41 1PASS 0.00  
SequenceTest.testAddSequenceFeaturesSequenceTest.testAddSequenceFeatures 17675900809355 Jan 05:14:40 1PASS 0.0010.001  
SequenceTest.testGetSubsequenceSequenceTest.testGetSubsequence 17675900810585 Jan 05:14:41 1PASS 0.00  
SequenceTest.testGapBitsetSequenceTest.testGapBitset 17675900810215 Jan 05:14:41 1PASS 0.00  
SequenceTest.testGetCharAtSequenceTest.testGetCharAt 17675900810375 Jan 05:14:41 1PASS 0.00  
SequenceTest.testFindPositionsSequenceTest.testFindPositions 17675900810185 Jan 05:14:41 1PASS 0.0010.001  
SequenceTest.testGetAlignmentAnnotations_forCalcIdLabelAndDescriptionSequenceTest.testGetAlignmentAnnotations_forCalcIdLabelAndDescription 17675900810315 Jan 05:14:41 1PASS 0.0010.001  
  • Report generated by OpenClover v 4.4.1 on Mon Jan 5 2026 05:20:18 GMT using coverage data from Mon Jan 5 2026 05:20:08 GMT.
  • OpenClover is free and open-source software.