|
jalview.ws2.actions.hmmer.PhmmerAction.Builder
jalview.ws2.actions.hmmer.PhmmerAction.Builder
|
1.0100%
|
|
|
jalview.ws2.api.WebService.Builder
jalview.ws2.api.WebService.Builder
|
1.0100%
|
|
|
jalview.datamodel.ResidueCount.SymbolCounts
jalview.datamodel.ResidueCount.SymbolCounts
|
1.0100%
|
|
|
jalview.analysis.Conservation
jalview.analysis.Conservation
|
0.869565287%
|
|
|
jalview.datamodel.Profiles
jalview.datamodel.Profiles
|
0.866666786.7%
|
|
|
jalview.ws2.api.WebService
jalview.ws2.api.WebService
|
0.880%
|
|
|
jalview.workers.ConsensusThread
jalview.workers.ConsensusThread
|
0.77577.5%
|
|
|
jalview.workers.SecondaryStructureConsensusThread
jalview.workers.SecondaryStructureConsensusThread
|
0.735849173.6%
|
|
|
jalview.datamodel.Profile
jalview.datamodel.Profile
|
0.672131167.2%
|
|
|
jalview.ws2.actions.BaseAction
jalview.ws2.actions.BaseAction
|
0.660%
|
|
|
jalview.workers.ConservationThread
jalview.workers.ConservationThread
|
0.595238159.5%
|
|
|
jalview.ws.params.ParamDatastoreI
jalview.ws.params.ParamDatastoreI
|
0.550%
|
|
|
jalview.gui.AnnotationChooser
jalview.gui.AnnotationChooser
|
0.4577777745.8%
|
|
|
jalview.ws2.gui.WebServicesMenuManager
jalview.ws2.gui.WebServicesMenuManager
|
0.3795918238%
|
|
|
jalview.datamodel.ResidueCount
jalview.datamodel.ResidueCount
|
0.3658536736.6%
|
|
|
jalview.ws2.client.ebi.JobDispatcherWSDiscoverer
jalview.ws2.client.ebi.JobDispatcherWSDiscoverer
|
0.346938834.7%
|
|
|
jalview.bin.ApplicationSingletonProvider
jalview.bin.ApplicationSingletonProvider
|
0.3428571534.3%
|
|
|
jalview.ws2.actions.hmmer.PhmmerAction
jalview.ws2.actions.hmmer.PhmmerAction
|
0.2941176629.4%
|
|
|
jalview.analysis.AAFrequency
jalview.analysis.AAFrequency
|
0.2887438828.9%
|
|
|
jalview.ws2.actions.BaseAction.Builder
jalview.ws2.actions.BaseAction.Builder
|
0.2380952423.8%
|
|
|
jalview.workers.AlignCalcManager2.SimpleWorkerManager
jalview.workers.AlignCalcManager2.SimpleWorkerManager
|
0.2142857221.4%
|
|
|
jalview.ws2.client.api.AbstractWebServiceDiscoverer
jalview.ws2.client.api.AbstractWebServiceDiscoverer
|
0.1792452817.9%
|
|
|
jalview.workers.AlignCalcManager2.WorkerManager
jalview.workers.AlignCalcManager2.WorkerManager
|
0.1666666716.7%
|
|
|
jalview.analysis.AnnotationSorter
jalview.analysis.AnnotationSorter
|
0.1562515.6%
|
|
|
jalview.util.Format
jalview.util.Format
|
0.1490683314.9%
|
|
|
jalview.util.MessageManager
jalview.util.MessageManager
|
0.1190476211.9%
|
|
|
jalview.ws2.params.SimpleParamDatastore
jalview.ws2.params.SimpleParamDatastore
|
0.11428571511.4%
|
|
|
jalview.datamodel.Annotation
jalview.datamodel.Annotation
|
0.11428571511.4%
|
|
|
jalview.gui.Desktop.MyDesktopManager
jalview.gui.Desktop.MyDesktopManager
|
0.1111111111.1%
|
|
|
jalview.analysis.scoremodels.ScoreModels
jalview.analysis.scoremodels.ScoreModels
|
0.0833333368.3%
|
|
|
jalview.bin.Console
jalview.bin.Console
|
0.0707547147.1%
|
|
|
jalview.log.JLogger
jalview.log.JLogger
|
0.065934076.6%
|
|
|
jalview.analysis.scoremodels.ScoreMatrix
jalview.analysis.scoremodels.ScoreMatrix
|
0.0617283966.2%
|
|
|
jalview.viewmodel.AlignmentViewport
jalview.viewmodel.AlignmentViewport
|
0.057049185.7%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.055118115.5%
|
|
|
jalview.util.ColorUtils
jalview.util.ColorUtils
|
0.0497237565%
|
|
|
jalview.datamodel.SecondaryStructureCount
jalview.datamodel.SecondaryStructureCount
|
0.0468754.7%
|
|
|
jalview.gui.Desktop
jalview.gui.Desktop
|
0.039018953.9%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.0368200843.7%
|
|
|
jalview.gui.JvSwingUtils
jalview.gui.JvSwingUtils
|
0.034482763.4%
|
|
|
jalview.analysis.AlignmentAnnotationUtils
jalview.analysis.AlignmentAnnotationUtils
|
0.0296610173%
|
|
|
jalview.util.Platform
jalview.util.Platform
|
0.0272277222.7%
|
|
|
jalview.renderer.ResidueShader
jalview.renderer.ResidueShader
|
0.0243902432.4%
|
|
|
jalview.gui.AlignmentPanel
jalview.gui.AlignmentPanel
|
0.0242872222.4%
|
|
|
jalview.viewmodel.styles.ViewStyle
jalview.viewmodel.styles.ViewStyle
|
0.021739132.2%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.0205173962.1%
|
|
|
jalview.structure.StructureSelectionManager
jalview.structure.StructureSelectionManager
|
0.0203562342%
|
|
|
jalview.analysis.AlignmentUtils
jalview.analysis.AlignmentUtils
|
0.0203012452%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.0127388541.3%
|
|
|
jalview.ws2.client.ebi.ParamStores
jalview.ws2.client.ebi.ParamStores
|
0.0102040811%
|
|
|
jalview.ws2.client.ebi.PhmmerWSClient
jalview.ws2.client.ebi.PhmmerWSClient
|
0.0101522841%
|
|
|
jalview.datamodel.AlignmentAnnotation
jalview.datamodel.AlignmentAnnotation
|
0.0093786630.9%
|
|
|
jalview.gui.AnnotationPanel
jalview.gui.AnnotationPanel
|
0.0062047570.6%
|
|
|
jalview.bin.Jalview
jalview.bin.Jalview
|
0.00564971750.6%
|
|
|
jalview.gui.AlignViewport
jalview.gui.AlignViewport
|
0.00461893760.5%
|
|
|
jalview.gui.AlignFrame
jalview.gui.AlignFrame
|
0.00250469640.3%
|
|
