|
jalview.datamodel.SFSortByEnd
jalview.datamodel.SFSortByEnd
|
1.0100%
|
|
|
jalview.datamodel.AlignmentAnnotation.AnnotCharSequence
jalview.datamodel.AlignmentAnnotation.AnnotCharSequence
|
0.851851985.2%
|
|
|
com.stevesoft.pat.SubMark
com.stevesoft.pat.SubMark
|
0.880%
|
|
|
com.stevesoft.pat.wrap.StringWrap
com.stevesoft.pat.wrap.StringWrap
|
0.62562.5%
|
|
|
jalview.ws.jws2.jabaws2.Jws2InstanceFactory
jalview.ws.jws2.jabaws2.Jws2InstanceFactory
|
0.565217456.5%
|
|
|
com.stevesoft.pat.OrMark
com.stevesoft.pat.OrMark
|
0.5555%
|
|
|
jalview.io.AlignFile
jalview.io.AlignFile
|
0.547297354.7%
|
|
|
com.stevesoft.pat.Skip2
com.stevesoft.pat.Skip2
|
0.518518551.9%
|
|
|
com.stevesoft.pat.FastChar
com.stevesoft.pat.FastChar
|
0.550%
|
|
|
jalview.analysis.SecStrConsensus.SimpleBP
jalview.analysis.SecStrConsensus.SimpleBP
|
0.550%
|
|
|
com.stevesoft.pat.FastMulti
com.stevesoft.pat.FastMulti
|
0.4629629646.3%
|
|
|
jalview.analysis.Rna
jalview.analysis.Rna
|
0.45545.5%
|
|
|
jalview.datamodel.HiddenCursorPosition
jalview.datamodel.HiddenCursorPosition
|
0.4285714342.9%
|
|
|
jalview.bin.ApplicationSingletonProvider
jalview.bin.ApplicationSingletonProvider
|
0.37537.5%
|
|
|
com.stevesoft.pat.Start
com.stevesoft.pat.Start
|
0.3636363736.4%
|
|
|
jalview.ws.jws2.jabaws2.Jws2Instance
jalview.ws.jws2.jabaws2.Jws2Instance
|
0.3173076831.7%
|
|
|
jalview.io.FastaFile
jalview.io.FastaFile
|
0.315315331.5%
|
|
|
com.stevesoft.pat.End
com.stevesoft.pat.End
|
0.3103448231%
|
|
|
com.stevesoft.pat.DotMulti
com.stevesoft.pat.DotMulti
|
0.275362327.5%
|
|
|
com.stevesoft.pat.Bracket
com.stevesoft.pat.Bracket
|
0.27527.5%
|
|
|
jalview.ws.api.UIinfo
jalview.ws.api.UIinfo
|
0.2745098227.5%
|
|
|
jalview.io.FileParse
jalview.io.FileParse
|
0.2742382327.4%
|
|
|
com.stevesoft.pat.Range
com.stevesoft.pat.Range
|
0.2525%
|
|
|
jalview.datamodel.AlignmentAnnotation
jalview.datamodel.AlignmentAnnotation
|
0.2379835823.8%
|
|
|
jalview.io.AnnotationFile
jalview.io.AnnotationFile
|
0.1979010619.8%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.1968503919.7%
|
|
|
jalview.io.StockholmFile
jalview.io.StockholmFile
|
0.1890547318.9%
|
|
|
com.stevesoft.pat.Pattern
com.stevesoft.pat.Pattern
|
0.173611117.4%
|
|
|
com.stevesoft.pat.oneChar
com.stevesoft.pat.oneChar
|
0.1714285817.1%
|
|
|
jalview.log.JalviewAppender
jalview.log.JalviewAppender
|
0.1666666716.7%
|
|
|
com.stevesoft.pat.Or
com.stevesoft.pat.Or
|
0.1666666716.7%
|
|
|
jalview.log.JLogger
jalview.log.JLogger
|
0.1428571514.3%
|
|
|
com.stevesoft.pat.RegRes
com.stevesoft.pat.RegRes
|
0.1304347813%
|
|
|
jalview.log.JLoggerLog4j
jalview.log.JLoggerLog4j
|
0.10679611610.7%
|
|
|
com.stevesoft.pat.patInt
com.stevesoft.pat.patInt
|
0.110%
|
|
|
jalview.bin.Console
jalview.bin.Console
|
0.089622649%
|
|
|
jalview.ws.api.ServiceWithParameters
jalview.ws.api.ServiceWithParameters
|
0.0833333368.3%
|
|
|
com.stevesoft.pat.Regex
com.stevesoft.pat.Regex
|
0.077272737.7%
|
|
|
jalview.datamodel.Annotation
jalview.datamodel.Annotation
|
0.0714285757.1%
|
|
|
jalview.io.AppletFormatAdapter
jalview.io.AppletFormatAdapter
|
0.065217396.5%
|
|
|
jalview.datamodel.SequenceFeature
jalview.datamodel.SequenceFeature
|
0.06474826.5%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.062761516.3%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.0588760045.9%
|
|
|
com.stevesoft.pat.FastBracket
com.stevesoft.pat.FastBracket
|
0.0538922145.4%
|
|
|
jalview.ws.jws2.JabaWsServerQuery
jalview.ws.jws2.JabaWsServerQuery
|
0.0416666684.2%
|
|
|
jalview.io.FileFormat
jalview.io.FileFormat
|
0.041379314.1%
|
|
|
jalview.util.StringUtils
jalview.util.StringUtils
|
0.0310734453.1%
|
|
|
jalview.bin.Cache
jalview.bin.Cache
|
0.0284552852.8%
|
|
|
com.stevesoft.pat.Skip
com.stevesoft.pat.Skip
|
0.0270270282.7%
|
|
|
jalview.ws.jws2.Jws2Discoverer
jalview.ws.jws2.Jws2Discoverer
|
0.019230771.9%
|
|
|
jalview.ws.jws2.JabaParamStore
jalview.ws.jws2.JabaParamStore
|
0.0156251.6%
|
|
|
jalview.datamodel.HiddenColumnsCursor
jalview.datamodel.HiddenColumnsCursor
|
0.0156251.6%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.0127388541.3%
|
|
|
jalview.util.Platform
jalview.util.Platform
|
0.0123762381.2%
|
|
|
jalview.datamodel.HiddenSequences
jalview.datamodel.HiddenSequences
|
0.009132420.9%
|
|
|
jalview.bin.Jalview
jalview.bin.Jalview
|
0.0056588520.6%
|
|
|
jalview.gui.Desktop
jalview.gui.Desktop
|
0.00390189510.4%
|
|
|
jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
|
0.00235849060.2%
|
|
|
jalview.gui.AlignFrame
jalview.gui.AlignFrame
|
0.00219160920.2%
|
|
