|
com.stevesoft.pat.patInf
com.stevesoft.pat.patInf
|
1.0100%
|
|
|
com.stevesoft.pat.OrMark
com.stevesoft.pat.OrMark
|
0.990%
|
|
|
com.stevesoft.pat.Rthings
com.stevesoft.pat.Rthings
|
0.8461538684.6%
|
|
|
com.stevesoft.pat.SubMark
com.stevesoft.pat.SubMark
|
0.880%
|
|
|
com.stevesoft.pat.wrap.StringWrap
com.stevesoft.pat.wrap.StringWrap
|
0.7575%
|
|
|
com.stevesoft.pat.Bracket
com.stevesoft.pat.Bracket
|
0.770%
|
|
|
com.stevesoft.pat.oneChar
com.stevesoft.pat.oneChar
|
0.685714368.6%
|
|
|
jalview.ws.SequenceFetcher
jalview.ws.SequenceFetcher
|
0.6470588464.7%
|
|
|
com.stevesoft.pat.Range
com.stevesoft.pat.Range
|
0.636363663.6%
|
|
|
com.stevesoft.pat.Pattern
com.stevesoft.pat.Pattern
|
0.62562.5%
|
|
|
com.stevesoft.pat.StrPos
com.stevesoft.pat.StrPos
|
0.6162790761.6%
|
|
|
jalview.analysis.SequenceIdMatcher.SeqIdName
jalview.analysis.SequenceIdMatcher.SeqIdName
|
0.605263260.5%
|
|
|
jalview.analysis.SequenceIdMatcher
jalview.analysis.SequenceIdMatcher
|
0.5526315655.3%
|
|
|
com.stevesoft.pat.Multi_stage2
com.stevesoft.pat.Multi_stage2
|
0.522222252.2%
|
|
|
jalview.io.NewickFile
jalview.io.NewickFile
|
0.520491852%
|
|
|
com.stevesoft.pat.FastChar
com.stevesoft.pat.FastChar
|
0.550%
|
|
|
com.stevesoft.pat.Multi
com.stevesoft.pat.Multi
|
0.550%
|
|
|
com.stevesoft.pat.FastMulti
com.stevesoft.pat.FastMulti
|
0.550%
|
|
|
com.stevesoft.pat.parsePerl
com.stevesoft.pat.parsePerl
|
0.448979644.9%
|
|
|
jalview.datamodel.BinaryNode
jalview.datamodel.BinaryNode
|
0.4393939443.9%
|
|
|
com.stevesoft.pat.Or
com.stevesoft.pat.Or
|
0.4102564241%
|
|
|
jalview.ws.dbsources.EmblSource
jalview.ws.dbsources.EmblSource
|
0.440%
|
|
|
jalview.bin.ApplicationSingletonProvider
jalview.bin.ApplicationSingletonProvider
|
0.37537.5%
|
|
|
com.stevesoft.pat.patInt
com.stevesoft.pat.patInt
|
0.3535%
|
|
|
com.stevesoft.pat.Regex
com.stevesoft.pat.Regex
|
0.3363636433.6%
|
|
|
com.stevesoft.pat.RegRes
com.stevesoft.pat.RegRes
|
0.2898550629%
|
|
|
jalview.ws.dbsources.EmblCdsSource
jalview.ws.dbsources.EmblCdsSource
|
0.285714328.6%
|
|
|
jalview.analysis.TreeModel
jalview.analysis.TreeModel
|
0.2596899326%
|
|
|
com.stevesoft.pat.NullPattern
com.stevesoft.pat.NullPattern
|
0.2525%
|
|
|
com.stevesoft.pat.StringRule
com.stevesoft.pat.StringRule
|
0.2525%
|
|
|
jalview.datamodel.SequenceNode
jalview.datamodel.SequenceNode
|
0.2307692323.1%
|
|
|
jalview.log.JalviewAppender
jalview.log.JalviewAppender
|
0.2222222222.2%
|
|
|
com.stevesoft.pat.Boundary
com.stevesoft.pat.Boundary
|
0.2222222222.2%
|
|
|
jalview.util.MessageManager
jalview.util.MessageManager
|
0.190476219%
|
|
|
jalview.ws.jws2.Jws2Discoverer
jalview.ws.jws2.Jws2Discoverer
|
0.1858974418.6%
|
|
|
com.stevesoft.pat.RegOpt
com.stevesoft.pat.RegOpt
|
0.1726618717.3%
|
|
|
com.stevesoft.pat.Branch
com.stevesoft.pat.Branch
|
0.140939614.1%
|
|
|
jalview.gui.JvSwingUtils
jalview.gui.JvSwingUtils
|
0.1379310313.8%
|
|
|
jalview.gui.Desktop.MyDesktopPane
jalview.gui.Desktop.MyDesktopPane
|
0.09523819.5%
|
|
|
com.stevesoft.pat.Replacer
com.stevesoft.pat.Replacer
|
0.091891899.2%
|
|
|
jalview.io.FileParse
jalview.io.FileParse
|
0.0914127459.1%
|
|
|
com.stevesoft.pat.ReplaceRule
com.stevesoft.pat.ReplaceRule
|
0.08771938.8%
|
|
|
jalview.ws.dbsources.Xfam
jalview.ws.dbsources.Xfam
|
0.086956528.7%
|
|
|
jalview.ext.ensembl.EnsemblSequenceFetcher
jalview.ext.ensembl.EnsemblSequenceFetcher
|
0.0833333368.3%
|
|
|
jalview.bin.Console
jalview.bin.Console
|
0.0707547147.1%
|
|
|
jalview.log.JLogger
jalview.log.JLogger
|
0.065934076.6%
|
|
|
jalview.ws.seqfetcher.ASequenceFetcher
jalview.ws.seqfetcher.ASequenceFetcher
|
0.0577777775.8%
|
|
|
jalview.ws.seqfetcher.DbSourceProxyImpl
jalview.ws.seqfetcher.DbSourceProxyImpl
|
0.0540540555.4%
|
|
|
jalview.gui.JalviewDialog
jalview.gui.JalviewDialog
|
0.0487804864.9%
|
|
|
jalview.ws.dbsources.Pdb
jalview.ws.dbsources.Pdb
|
0.0408163264.1%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.0401673654%
|
|
|
jalview.util.Platform
jalview.util.Platform
|
0.0371287133.7%
|
|
|
jalview.ws.jws2.JabaWsServerQuery
jalview.ws.jws2.JabaWsServerQuery
|
0.031253.1%
|
|
|
jalview.bin.Cache
jalview.bin.Cache
|
0.0284552852.8%
|
|
|
jalview.gui.BlogReader
jalview.gui.BlogReader
|
0.0248618782.5%
|
|
|
jalview.util.DBRefUtils
jalview.util.DBRefUtils
|
0.0208333342.1%
|
|
|
jalview.ws.dbsources.Uniprot
jalview.ws.dbsources.Uniprot
|
0.015325671.5%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.0127388541.3%
|
|
|
jalview.gui.AlignFrame
jalview.gui.AlignFrame
|
0.0125234821.3%
|
|
|
jalview.ext.ensembl.EnsemblGene
jalview.ext.ensembl.EnsemblGene
|
0.0081632650.8%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.0078740160.8%
|
|
|
jalview.gui.Desktop
jalview.gui.Desktop
|
0.006131550.6%
|
|
|
jalview.bin.Jalview
jalview.bin.Jalview
|
0.0056588520.6%
|
|
|
com.stevesoft.pat.CaseMgr
com.stevesoft.pat.CaseMgr
|
0.00278551530.3%
|
|
