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jalview.io.DataSourceType
jalview.io.DataSourceType
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jalview.ws2.api.WebService.Builder
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jalview.ws.params.ParamDatastoreI
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jalview.analysis.SeqsetUtils.SequenceInfo
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jalview.json.binding.biojs.BioJSReleasePojo
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jalview.ws2.api.WebService
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jalview.json.binding.biojs.BioJSRepositoryPojo
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jalview.ws2.client.ebi.JobDispatcherWSDiscoverer
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jalview.gui.ColourMenuHelper
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org.json.simple.parser.Yylex
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jalview.ws.jws2.JabaWsServerQuery
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jalview.datamodel.CigarArray
jalview.datamodel.CigarArray
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org.json.simple.parser.JSONParser
org.json.simple.parser.JSONParser
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jalview.ws2.actions.hmmer.PhmmerAction
jalview.ws2.actions.hmmer.PhmmerAction
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jalview.datamodel.CigarBase
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jalview.io.FileParse
jalview.io.FileParse
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jalview.gui.AlignViewport
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jalview.io.IdentifyFile
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jalview.datamodel.SeqCigar
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jalview.gui.JvSwingUtils
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jalview.gui.JalviewChangeSupport
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jalview.datamodel.SequenceCursor
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jalview.analysis.SeqsetUtils
jalview.analysis.SeqsetUtils
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jalview.util.HttpUtils
jalview.util.HttpUtils
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jalview.datamodel.Sequence
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jalview.ws2.client.api.AbstractWebServiceDiscoverer
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jalview.io.FormatAdapter
jalview.io.FormatAdapter
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jalview.log.JalviewAppender
jalview.log.JalviewAppender
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jalview.ws.jws1.WS1Client
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jalview.analysis.AnnotationSorter
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jalview.ws.rest.params.SeqGroupIndexVector
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jalview.schemes.Blosum62ColourScheme
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jalview.ws2.params.SimpleParamDatastore
jalview.ws2.params.SimpleParamDatastore
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jalview.util.StringUtils
jalview.util.StringUtils
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jalview.io.FileFormat
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jalview.ws.rest.params.AnnotationFile
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jalview.gui.AlignFrame
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jalview.ws.WSClient
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0.098039229.8%
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org.json.simple.parser.Yytoken
org.json.simple.parser.Yytoken
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jalview.ws2.client.jpred4.JPred4WSDiscoverer
jalview.ws2.client.jpred4.JPred4WSDiscoverer
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jalview.util.JSONUtils
jalview.util.JSONUtils
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jalview.renderer.ResidueShader
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jalview.ws.jws1.Discoverer
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jalview.analysis.scoremodels.ScoreModels
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jalview.datamodel.AlignmentView.ScGroup
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jalview.schemes.RNAHelicesColour
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jalview.util.Platform
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jalview.ws.jws2.Jws2Discoverer
jalview.ws.jws2.Jws2Discoverer
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jalview.schemes.HmmerLocalBackground
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jalview.datamodel.SequenceGroup
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jalview.gui.PaintRefresher
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jalview.gui.Desktop
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0.068004466.8%
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jalview.gui.IdPanel
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0.067264576.7%
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jalview.gui.Desktop.MyDesktopManager
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jalview.schemes.PIDColourScheme
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jalview.gui.IdwidthAdjuster
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jalview.analysis.CrossRef
jalview.analysis.CrossRef
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jalview.analysis.scoremodels.ScoreMatrix
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jalview.schemes.ColourSchemes
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jalview.bin.Cache
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jalview.analysis.GeneticCodes
jalview.analysis.GeneticCodes
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0.0496894425%
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jalview.gui.Desktop.MyDesktopPane
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0.047619054.8%
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jalview.schemes.HMMMatchScoreColourScheme
jalview.schemes.HMMMatchScoreColourScheme
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0.042553194.3%
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jalview.gui.AnnotationPanel
jalview.gui.AnnotationPanel
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jalview.schemes.HmmerColourScheme
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0.038461543.8%
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org.json.simple.JSONObject
org.json.simple.JSONObject
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0.037735853.8%
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jalview.datamodel.ColumnSelection.IntList
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0.0373831763.7%
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jalview.structure.StructureSelectionManager
jalview.structure.StructureSelectionManager
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jalview.ws.jws1.JPredClient
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jalview.analysis.AlignmentAnnotationUtils
jalview.analysis.AlignmentAnnotationUtils
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jalview.ws2.client.slivka.SlivkaWSDiscoverer
jalview.ws2.client.slivka.SlivkaWSDiscoverer
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0.0268456382.7%
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jalview.util.FileUtils
jalview.util.FileUtils
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0.0267857152.7%
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jalview.workers.ConsensusThread
jalview.workers.ConsensusThread
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0.0252.5%
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jalview.renderer.ResidueColourFinder
jalview.renderer.ResidueColourFinder
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0.0238095242.4%
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jalview.util.DBRefUtils
jalview.util.DBRefUtils
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jalview.gui.ScalePanel
jalview.gui.ScalePanel
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0.0235294122.4%
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jalview.gui.IdCanvas
jalview.gui.IdCanvas
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0.0232558142.3%
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jalview.util.ColorUtils
jalview.util.ColorUtils
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jalview.workers.SecondaryStructureConsensusThread
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jalview.datamodel.HiddenColumns
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jalview.workers.InformationThread
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jalview.datamodel.HiddenColumnsCursor
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jalview.gui.SequenceRenderer
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jalview.hmmer.HmmerCommand
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jalview.bin.Jalview
jalview.bin.Jalview
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0.01374292651.4%
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jalview.controller.AlignViewController
jalview.controller.AlignViewController
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jalview.gui.SeqPanel
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jalview.analysis.AlignSeq
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jalview.datamodel.features.SequenceFeatures
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jalview.io.SequenceAnnotationReport
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jalview.analysis.AlignmentUtils
jalview.analysis.AlignmentUtils
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jalview.ws2.client.ebi.PhmmerWSClient
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0.0101522841%
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jalview.gui.AnnotationLabels
jalview.gui.AnnotationLabels
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jalview.datamodel.HiddenSequences
jalview.datamodel.HiddenSequences
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jalview.bin.argparser.BootstrapArgs
jalview.bin.argparser.BootstrapArgs
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0.0082644620.8%
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jalview.gui.SeqCanvas
jalview.gui.SeqCanvas
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0.0080971660.8%
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org.json.simple.JSONArray
org.json.simple.JSONArray
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0.0080645160.8%
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jalview.renderer.seqfeatures.FeatureRenderer
jalview.renderer.seqfeatures.FeatureRenderer
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0.007547170.8%
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jalview.gui.QuitHandler
jalview.gui.QuitHandler
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0.00722021660.7%
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jalview.renderer.AnnotationRenderer
jalview.renderer.AnnotationRenderer
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0.00351185260.4%
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jalview.datamodel.ColumnSelection
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0.00343642620.3%
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