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Coverage Report

  1. Project Clover database Wed Dec 3 2025 15:58:31 GMT
  2. Package jalview.structures.models
  3. Class AAStructureBindingModelTest

Test testImportPDBPreservesChainMappings

Test
testImportPDBPreservesChainMappings 1PASS 3 Dec 16:00:14 0.421
 
testImportPDBPreservesChainMappings
com.stevesoft.pat.patInf   com.stevesoft.pat.patInf 1.0100%
jalview.ws.WSClient   jalview.ws.WSClient 1.0100%
com.stevesoft.pat.Rthings   com.stevesoft.pat.Rthings 0.8461538684.6%
mc_view.Residue   mc_view.Residue 0.8461538684.6%
com.stevesoft.pat.StrPos   com.stevesoft.pat.StrPos 0.523255852.3%
com.stevesoft.pat.OrMark   com.stevesoft.pat.OrMark 0.550%
mc_view.Bond   mc_view.Bond 0.550%
com.stevesoft.pat.wrap.StringWrap   com.stevesoft.pat.wrap.StringWrap 0.550%
com.stevesoft.pat.oneChar   com.stevesoft.pat.oneChar 0.485714348.6%
jalview.structure.StructureImportSettings   jalview.structure.StructureImportSettings 0.485714348.6%
jalview.ws.jws2.MsaWSClient   jalview.ws.jws2.MsaWSClient 0.4429530244.3%
jalview.ext.jmol.JmolParser   jalview.ext.jmol.JmolParser 0.4289405642.9%
jalview.datamodel.HiddenCursorPosition   jalview.datamodel.HiddenCursorPosition 0.4285714342.9%
jalview.io.StructureFile   jalview.io.StructureFile 0.4186046441.9%
jalview.ws.jws2.Jws2Discoverer   jalview.ws.jws2.Jws2Discoverer 0.3623762436.2%
jalview.io.AlignFile   jalview.io.AlignFile 0.321917832.2%
jalview.util.Comparison   jalview.util.Comparison 0.3188976331.9%
jalview.ws.rest.RestServiceDescription   jalview.ws.rest.RestServiceDescription 0.31531.5%
mc_view.PDBChain   mc_view.PDBChain 0.314814831.5%
com.stevesoft.pat.Pattern   com.stevesoft.pat.Pattern 0.3055555530.6%
jalview.ws.jws2.SequenceAnnotationWSClient   jalview.ws.jws2.SequenceAnnotationWSClient 0.2903225729%
jalview.datamodel.annotations.AnnotationRowBuilder   jalview.datamodel.annotations.AnnotationRowBuilder 0.282051328.2%
mc_view.Atom   mc_view.Atom 0.282051328.2%
jalview.ws.jws2.JabaPreset   jalview.ws.jws2.JabaPreset 0.2727272827.3%
com.stevesoft.pat.Or   com.stevesoft.pat.Or 0.2692307826.9%
jalview.ws.jws2.jabaws2.Jws2Instance   jalview.ws.jws2.jabaws2.Jws2Instance 0.2528735725.3%
com.stevesoft.pat.Regex   com.stevesoft.pat.Regex 0.250909125.1%
jalview.gui.JalviewChangeSupport   jalview.gui.JalviewChangeSupport 0.2525%
jalview.ws.uimodel.AlignAnalysisUIText   jalview.ws.uimodel.AlignAnalysisUIText 0.2439024424.4%
jalview.ws.rest.params.Alignment   jalview.ws.rest.params.Alignment 0.2435897424.4%
jalview.util.MessageManager   jalview.util.MessageManager 0.2380952423.8%
jalview.datamodel.SequenceCursor   jalview.datamodel.SequenceCursor 0.2333333323.3%
com.stevesoft.pat.Range   com.stevesoft.pat.Range 0.2272727322.7%
com.stevesoft.pat.Bracket   com.stevesoft.pat.Bracket 0.22522.5%
jalview.util.Format   jalview.util.Format 0.2236024922.4%
jalview.ws.jws2.Jws2Client   jalview.ws.jws2.Jws2Client 0.2228915722.3%
jalview.util.QuickSort   jalview.util.QuickSort 0.2135922321.4%
jalview.gui.JvSwingUtils   jalview.gui.JvSwingUtils 0.2108843521.1%
jalview.ws.rest.InputType   jalview.ws.rest.InputType 0.2056074720.6%
jalview.datamodel.features.FeatureStore   jalview.datamodel.features.FeatureStore 0.1842900418.4%
jalview.datamodel.Sequence   jalview.datamodel.Sequence 0.1766723817.7%
com.stevesoft.pat.patInt   com.stevesoft.pat.patInt 0.17517.5%
jalview.util.CaseInsensitiveString   jalview.util.CaseInsensitiveString 0.1739130517.4%
jalview.ws.jws1.WS1Client   jalview.ws.jws1.WS1Client 0.1616%
jalview.io.FormatAdapter   jalview.io.FormatAdapter 0.1515%
jalview.datamodel.Annotation   jalview.datamodel.Annotation 0.1428571514.3%
jalview.io.FileFormats   jalview.io.FileFormats 0.1414%
jalview.datamodel.AlignmentAnnotation   jalview.datamodel.AlignmentAnnotation 0.138888913.9%
jalview.datamodel.PDBEntry   jalview.datamodel.PDBEntry 0.1281138812.8%
jalview.ws.rest.params.SeqGroupIndexVector   jalview.ws.rest.params.SeqGroupIndexVector 0.12408759412.4%
jalview.ws.rest.RestClient   jalview.ws.rest.RestClient 0.1111111111.1%
jalview.ws.rest.params.AnnotationFile   jalview.ws.rest.params.AnnotationFile 0.10256410410.3%
com.stevesoft.pat.parsePerl   com.stevesoft.pat.parsePerl 0.098639469.9%
jalview.gui.SplashScreen   jalview.gui.SplashScreen 0.0974025959.7%
jalview.util.StringUtils   jalview.util.StringUtils 0.094395289.4%
jalview.io.AppletFormatAdapter   jalview.io.AppletFormatAdapter 0.090062119%
jalview.datamodel.SequenceFeature   jalview.datamodel.SequenceFeature 0.0863309358.6%
jalview.io.FileParse   jalview.io.FileParse 0.0831024948.3%
jalview.gui.Console   jalview.gui.Console 0.082568818.3%
com.stevesoft.pat.FastMulti   com.stevesoft.pat.FastMulti 0.0740740757.4%
jalview.datamodel.features.SequenceFeatures   jalview.datamodel.features.SequenceFeatures 0.0700636957%
jalview.log.JLogger   jalview.log.JLogger 0.065934076.6%
com.stevesoft.pat.RegOpt   com.stevesoft.pat.RegOpt 0.06474826.5%
jalview.datamodel.DBRefEntry   jalview.datamodel.DBRefEntry 0.0616438356.2%
ext.vamsas.ServiceHandle   ext.vamsas.ServiceHandle 0.061224496.1%
jalview.workers.AlignCalcManager   jalview.workers.AlignCalcManager 0.059523816%
jalview.bin.Console   jalview.bin.Console 0.05911335.9%
jalview.ws.jws1.Discoverer   jalview.ws.jws1.Discoverer 0.0512820525.1%
jalview.structures.models.AAStructureBindingModel   jalview.structures.models.AAStructureBindingModel 0.051103375.1%
jalview.io.FileFormat   jalview.io.FileFormat 0.043795624.4%
jalview.datamodel.Alignment   jalview.datamodel.Alignment 0.042279414.2%
jalview.ws.jws2.JabaParamStore   jalview.ws.jws2.JabaParamStore 0.0416666684.2%
jalview.bin.Cache   jalview.bin.Cache 0.0413223134.1%
jalview.gui.AlignFrame   jalview.gui.AlignFrame 0.0318104923.2%
jalview.ws.jws1.JPredClient   jalview.ws.jws1.JPredClient 0.0310559013.1%
com.stevesoft.pat.RegRes   com.stevesoft.pat.RegRes 0.0289855082.9%
jalview.ws.jws2.JabaWsServerQuery   jalview.ws.jws2.JabaWsServerQuery 0.0208333342.1%
jalview.util.Platform   jalview.util.Platform 0.0188679251.9%
jalview.datamodel.HiddenColumnsCursor   jalview.datamodel.HiddenColumnsCursor 0.0156251.6%
jalview.gui.Desktop   jalview.gui.Desktop 0.0113895221.1%
jalview.datamodel.HiddenSequences   jalview.datamodel.HiddenSequences 0.009132420.9%
jalview.gui.SequenceFetcher   jalview.gui.SequenceFetcher 0.0085106380.9%
jalview.viewmodel.AlignmentViewport   jalview.viewmodel.AlignmentViewport 0.00417536540.4%
jalview.ext.jmol.JalviewJmolBinding   jalview.ext.jmol.JalviewJmolBinding 0.0040485830.4%
com.stevesoft.pat.CaseMgr   com.stevesoft.pat.CaseMgr 0.00278551530.3%
jalview.datamodel.HiddenColumns   jalview.datamodel.HiddenColumns 0.00235849060.2%
jalview.schemes.ResidueProperties   jalview.schemes.ResidueProperties 0.00105042020.1%
  • Report generated by OpenClover v 4.4.1 on Wed Dec 3 2025 16:08:47 GMT using coverage data from Wed Dec 3 2025 16:08:32 GMT.
  • OpenClover is free and open-source software.