|
jalview.datamodel.Profiles
jalview.datamodel.Profiles
|
0.866666786.7%
|
|
|
jalview.workers.ConsensusThread
jalview.workers.ConsensusThread
|
0.77577.5%
|
|
|
jalview.workers.SecondaryStructureConsensusThread
jalview.workers.SecondaryStructureConsensusThread
|
0.735849173.6%
|
|
|
jalview.datamodel.Profile
jalview.datamodel.Profile
|
0.672131167.2%
|
|
|
jalview.io.gff.SequenceOntologyFactory
jalview.io.gff.SequenceOntologyFactory
|
0.660%
|
|
|
jalview.datamodel.features.FeatureAttributes.AttributeData
jalview.datamodel.features.FeatureAttributes.AttributeData
|
0.4363636443.6%
|
|
|
jalview.io.gff.InterProScanHelper
jalview.io.gff.InterProScanHelper
|
0.4333333443.3%
|
|
|
jalview.datamodel.HiddenCursorPosition
jalview.datamodel.HiddenCursorPosition
|
0.4285714342.9%
|
|
|
jalview.io.gff.Gff3Helper
jalview.io.gff.Gff3Helper
|
0.3834586438.3%
|
|
|
jalview.bin.ApplicationSingletonProvider
jalview.bin.ApplicationSingletonProvider
|
0.37537.5%
|
|
|
jalview.io.gff.GffHelperBase
jalview.io.gff.GffHelperBase
|
0.336492933.6%
|
|
|
jalview.datamodel.features.FeatureAttributes
jalview.datamodel.features.FeatureAttributes
|
0.2887323828.9%
|
|
|
jalview.analysis.AAFrequency
jalview.analysis.AAFrequency
|
0.2707993427.1%
|
|
|
jalview.datamodel.SequenceDummy
jalview.datamodel.SequenceDummy
|
0.2222222222.2%
|
|
|
jalview.workers.AlignCalcManager2.SimpleWorkerManager
jalview.workers.AlignCalcManager2.SimpleWorkerManager
|
0.2142857221.4%
|
|
|
jalview.datamodel.SequenceFeature
jalview.datamodel.SequenceFeature
|
0.2122302221.2%
|
|
|
jalview.datamodel.ResidueCount
jalview.datamodel.ResidueCount
|
0.2055749120.6%
|
|
|
jalview.datamodel.features.FeatureStore
jalview.datamodel.features.FeatureStore
|
0.2024169120.2%
|
|
|
jalview.ext.so.SequenceOntology
jalview.ext.so.SequenceOntology
|
0.187518.8%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.1847133818.5%
|
|
|
jalview.workers.AlignCalcManager2.WorkerManager
jalview.workers.AlignCalcManager2.WorkerManager
|
0.1666666716.7%
|
|
|
jalview.log.JalviewAppender
jalview.log.JalviewAppender
|
0.1666666716.7%
|
|
|
jalview.log.JLogger
jalview.log.JLogger
|
0.1428571514.3%
|
|
|
jalview.analysis.AnnotationSorter
jalview.analysis.AnnotationSorter
|
0.132812513.3%
|
|
|
jalview.datamodel.Annotation
jalview.datamodel.Annotation
|
0.11428571511.4%
|
|
|
jalview.log.JLoggerLog4j
jalview.log.JLoggerLog4j
|
0.10679611610.7%
|
|
|
jalview.datamodel.AlignedCodonFrame
jalview.datamodel.AlignedCodonFrame
|
0.095563149.6%
|
|
|
jalview.bin.Console
jalview.bin.Console
|
0.089622649%
|
|
|
jalview.analysis.Conservation
jalview.analysis.Conservation
|
0.084541068.5%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.078740167.9%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.075313817.5%
|
|
|
jalview.util.StringUtils
jalview.util.StringUtils
|
0.0734463267.3%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.0490633364.9%
|
|
|
jalview.viewmodel.AlignmentViewport
jalview.viewmodel.AlignmentViewport
|
0.047868854.8%
|
|
|
jalview.datamodel.SecondaryStructureCount
jalview.datamodel.SecondaryStructureCount
|
0.0468754.7%
|
|
|
jalview.util.MapList
jalview.util.MapList
|
0.04644.6%
|
|
|
jalview.util.ColorUtils
jalview.util.ColorUtils
|
0.0441988974.4%
|
|
|
jalview.datamodel.Mapping
jalview.datamodel.Mapping
|
0.0346320353.5%
|
|
|
jalview.analysis.AlignmentAnnotationUtils
jalview.analysis.AlignmentAnnotationUtils
|
0.0296610173%
|
|
|
jalview.datamodel.AlignedCodonFrame.SequenceToSequenceMapping
jalview.datamodel.AlignedCodonFrame.SequenceToSequenceMapping
|
0.0267857152.7%
|
|
|
jalview.renderer.ResidueShader
jalview.renderer.ResidueShader
|
0.0243902432.4%
|
|
|
jalview.gui.AlignmentPanel
jalview.gui.AlignmentPanel
|
0.0242872222.4%
|
|
|
jalview.util.Format
jalview.util.Format
|
0.0227743282.3%
|
|
|
jalview.viewmodel.styles.ViewStyle
jalview.viewmodel.styles.ViewStyle
|
0.021739132.2%
|
|
|
jalview.structure.StructureSelectionManager
jalview.structure.StructureSelectionManager
|
0.0203562342%
|
|
|
jalview.datamodel.HiddenColumnsCursor
jalview.datamodel.HiddenColumnsCursor
|
0.0156251.6%
|
|
|
jalview.analysis.AlignmentUtils
jalview.analysis.AlignmentUtils
|
0.0130975771.3%
|
|
|
jalview.analysis.AlignSeq
jalview.analysis.AlignSeq
|
0.01275510251.3%
|
|
|
jalview.gui.AnnotationPanel
jalview.gui.AnnotationPanel
|
0.01034126151%
|
|
|
jalview.datamodel.AlignmentAnnotation
jalview.datamodel.AlignmentAnnotation
|
0.0093786630.9%
|
|
|
jalview.datamodel.HiddenSequences
jalview.datamodel.HiddenSequences
|
0.009132420.9%
|
|
|
jalview.analysis.scoremodels.ScoreMatrix
jalview.analysis.scoremodels.ScoreMatrix
|
0.0082304520.8%
|
|
|
jalview.bin.Jalview
jalview.bin.Jalview
|
0.0056588520.6%
|
|
|
jalview.util.Platform
jalview.util.Platform
|
0.0049019610.5%
|
|
|
jalview.gui.AlignViewport
jalview.gui.AlignViewport
|
0.00461893760.5%
|
|
|
jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
|
0.00235849060.2%
|
|
|
jalview.gui.Desktop
jalview.gui.Desktop
|
0.00167224080.2%
|
|
