Class Jalview2xmlTests

Class	Tests	Fail	Error	Time (secs)	% Tests Success
Jalview2xmlTests	2828	11	00	90.307	0.9642857396.4%

Tests	Started	Status	Time (secs)	Message
Jalview2xmlTests.noDuplicatePdbMappingsMadeJalview2xmlTests.noDuplicatePdbMappingsMade	17647816467073 Dec 17:07:26	3FAIL	1.7411.741	Expected only two mappings for 1A70 expected [2] but found [0] Expected only two mappings for 1A70 expected [2] but found [0] java.lang.AssertionError: Expected only two mappings for 1A70 expected [2] but found [0] at org.testng.Assert.fail(Assert.java:110) at org.testng.Assert.failNotEquals(Assert.java:1413) at org.testng.Assert.assertEqualsImpl(Assert.java:149) at org.testng.Assert.assertEquals(Assert.java:131) at org.testng.Assert.assertEquals(Assert.java:1240) at jalview.project.Jalview2xmlTests.noDuplicatePdbMappingsMade(Jalview2xmlTests.java:355) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:566) at org.testng.internal.invokers.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:139) at org.testng.internal.invokers.TestInvoker.invokeMethod(TestInvoker.java:677) at org.testng.internal.invokers.TestInvoker.invokeTestMethod(TestInvoker.java:221) at org.testng.internal.invokers.MethodRunner.runInSequence(MethodRunner.java:50) at org.testng.internal.invokers.TestInvoker$MethodInvocationAgent.invoke(TestInvoker.java:969) at org.testng.internal.invokers.TestInvoker.invokeTestMethods(TestInvoker.java:194) at org.testng.internal.invokers.TestMethodWorker.invokeTestMethods(TestMethodWorker.java:148) at org.testng.internal.invokers.TestMethodWorker.run(TestMethodWorker.java:128) at java.base/java.util.ArrayList.forEach(ArrayList.java:1541) at org.testng.TestRunner.privateRun(TestRunner.java:829) at org.testng.TestRunner.run(TestRunner.java:602) at org.testng.SuiteRunner.runTest(SuiteRunner.java:437) at org.testng.SuiteRunner.runSequentially(SuiteRunner.java:431) at org.testng.SuiteRunner.privateRun(SuiteRunner.java:391) at org.testng.SuiteRunner.run(SuiteRunner.java:330) at org.testng.SuiteRunnerWorker.runSuite(SuiteRunnerWorker.java:52) at org.testng.SuiteRunnerWorker.run(SuiteRunnerWorker.java:95) at org.testng.TestNG.runSuitesSequentially(TestNG.java:1256) at org.testng.TestNG.runSuitesLocally(TestNG.java:1176) at org.testng.TestNG.runSuites(TestNG.java:1099) at org.testng.TestNG.run(TestNG.java:1067) at org.gradle.api.internal.tasks.testing.testng.TestNGTestClassProcessor.runTests(TestNGTestClassProcessor.java:141) at org.gradle.api.internal.tasks.testing.testng.TestNGTestClassProcessor.stop(TestNGTestClassProcessor.java:90) at org.gradle.api.internal.tasks.testing.SuiteTestClassProcessor.stop(SuiteTestClassProcessor.java:61) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:566) at org.gradle.internal.dispatch.ReflectionDispatch.dispatch(ReflectionDispatch.java:36) at org.gradle.internal.dispatch.ReflectionDispatch.dispatch(ReflectionDispatch.java:24) at org.gradle.internal.dispatch.ContextClassLoaderDispatch.dispatch(ContextClassLoaderDispatch.java:33) at org.gradle.internal.dispatch.ProxyDispatchAdapter$DispatchingInvocationHandler.invoke(ProxyDispatchAdapter.java:94) at com.sun.proxy.$Proxy2.stop(Unknown Source) at org.gradle.api.internal.tasks.testing.worker.TestWorker$3.run(TestWorker.java:193) at org.gradle.api.internal.tasks.testing.worker.TestWorker.executeAndMaintainThreadName(TestWorker.java:129) at org.gradle.api.internal.tasks.testing.worker.TestWorker.execute(TestWorker.java:100) at org.gradle.api.internal.tasks.testing.worker.TestWorker.execute(TestWorker.java:60) at org.gradle.process.internal.worker.child.ActionExecutionWorker.execute(ActionExecutionWorker.java:56) at org.gradle.process.internal.worker.child.SystemApplicationClassLoaderWorker.call(SystemApplicationClassLoaderWorker.java:133) at org.gradle.process.internal.worker.child.SystemApplicationClassLoaderWorker.call(SystemApplicationClassLoaderWorker.java:71) at worker.org.gradle.process.internal.worker.GradleWorkerMain.run(GradleWorkerMain.java:69) at worker.org.gradle.process.internal.worker.GradleWorkerMain.main(GradleWorkerMain.java:74)
Jalview2xmlTests.testMergeDatasetsforViewsJalview2xmlTests.testMergeDatasetsforViews	17647816675873 Dec 17:07:47	1PASS	0.1020.102
Jalview2xmlTests.testStoreAndRecoverReferenceSeqSettingsJalview2xmlTests.testStoreAndRecoverReferenceSeqSettings	17647817016343 Dec 17:08:21	1PASS	22.99522.995
Jalview2xmlTests.testStoreAndRecoverGroupRepSeqsJalview2xmlTests.testStoreAndRecoverGroupRepSeqs	17647816993433 Dec 17:08:19	1PASS	0.2280.228
Jalview2xmlTests.testSaveAndLoadAnnotationsPropertiesJalview2xmlTests.testSaveAndLoadAnnotationsProperties	17647816735923 Dec 17:07:53	1PASS	4.0354.035
Jalview2xmlTests.testMergeDatasetsforManyViewsJalview2xmlTests.testMergeDatasetsforManyViews	17647816670913 Dec 17:07:47	1PASS	0.4820.482
Jalview2xmlTests.testSaveAndLoadAnnotationBasedTreeJalview2xmlTests.testSaveAndLoadAnnotationBasedTree	17647816687593 Dec 17:07:48	1PASS	4.8054.805
Jalview2xmlTests.gatherViewsHereJalview2xmlTests.gatherViewsHere	17647816449003 Dec 17:07:24	1PASS	1.7711.771
Jalview2xmlTests.testStoreAndRecoverColourThresholdsJalview2xmlTests.testStoreAndRecoverColourThresholds	17647816780443 Dec 17:07:58	1PASS	0.1480.148
Jalview2xmlTests.testMatrixToFloatsAndBackJalview2xmlTests.testMatrixToFloatsAndBack	17647816655543 Dec 17:07:45	1PASS	1.5351.535
Jalview2xmlTests.testPcaViewAssociationJalview2xmlTests.testPcaViewAssociation	17647816680143 Dec 17:07:48	1PASS	0.3490.349
Jalview2xmlTests.testStoreAndRecoverAnnotationRowElementColoursJalview2xmlTests.testStoreAndRecoverAnnotationRowElementColours	17647816777903 Dec 17:07:57	1PASS	0.2480.248
Jalview2xmlTests.testStoreAndRecoverHmmProfileJalview2xmlTests.testStoreAndRecoverHmmProfile	17647816995743 Dec 17:08:19	1PASS	0.3320.332
Jalview2xmlTests.testStoreAndRecoverNoOverviewJalview2xmlTests.testStoreAndRecoverNoOverview	17647816999133 Dec 17:08:19	1PASS	0.1090.109
Jalview2xmlTests.testPAEsaveRestoreJalview2xmlTests.testPAEsaveRestore	17647816676923 Dec 17:07:47	1PASS	0.3170.317
Jalview2xmlTests.testStoreAndRestoreIDwidthAndAnnotationHeightJalview2xmlTests.testStoreAndRestoreIDwidthAndAnnotationHeight	17647817246693 Dec 17:08:44	1PASS	0.5470.547
Jalview2xmlTests.testIsVersionStringLaterThanJalview2xmlTests.testIsVersionStringLaterThan	17647816655523 Dec 17:07:45	1PASS	0.0010.001
Jalview2xmlTests.testAutoShowOverviewForLegacyProjectsJalview2xmlTests.testAutoShowOverviewForLegacyProjects	17647816484663 Dec 17:07:28	1PASS	7.3297.329
Jalview2xmlTests.testSaveLoadFeatureColoursAndFiltersJalview2xmlTests.testSaveLoadFeatureColoursAndFilters	17647816776533 Dec 17:07:57	1PASS	0.1340.134
Jalview2xmlTests.testCopyViewSettingsJalview2xmlTests.testCopyViewSettings	17647816562913 Dec 17:07:36	1PASS	9.2519.251
Jalview2xmlTests.testStoreAndRecoverOverviewJalview2xmlTests.testStoreAndRecoverOverview	17647817000253 Dec 17:08:20	1PASS	0.3020.302
Jalview2xmlTests.testStoreAndRecoverPDBEntryJalview2xmlTests.testStoreAndRecoverPDBEntry	17647817003373 Dec 17:08:20	1PASS	1.2941.294
Jalview2xmlTests.testRNAStructureRecoveryJalview2xmlTests.testRNAStructureRecovery	17647816683783 Dec 17:07:48	1PASS	0.3780.378
Jalview2xmlTests.viewRefPdbAnnotationJalview2xmlTests.viewRefPdbAnnotation	17647817254033 Dec 17:08:45	1PASS	10.0910.09
Jalview2xmlTests.testTCoffeeScoresJalview2xmlTests.testTCoffeeScores	17647817252293 Dec 17:08:45	1PASS	0.1710.171
Jalview2xmlTests.testColourByAnnotScoresJalview2xmlTests.testColourByAnnotScores	17647816558113 Dec 17:07:35	1PASS	0.4760.476
Jalview2xmlTests.testStoreAndRecoverExpandedviewsJalview2xmlTests.testStoreAndRecoverExpandedviews	17647816781963 Dec 17:07:58	1PASS	21.0521.05
Jalview2xmlTests.testStoreAndRecoverGeneLocusJalview2xmlTests.testStoreAndRecoverGeneLocus	17647816992533 Dec 17:08:19	1PASS	0.0870.087

Coverage Report

Class Jalview2xmlTests