|
jalview.ws.WSClient
jalview.ws.WSClient
|
1.0100%
|
|
|
jalview.datamodel.ResidueCount.SymbolCounts
jalview.datamodel.ResidueCount.SymbolCounts
|
1.0100%
|
|
|
jalview.schemes.HelixColourScheme
jalview.schemes.HelixColourScheme
|
1.0100%
|
|
|
jalview.schemes.TurnColourScheme
jalview.schemes.TurnColourScheme
|
1.0100%
|
|
|
jalview.schemes.StrandColourScheme
jalview.schemes.StrandColourScheme
|
1.0100%
|
|
|
jalview.schemes.BuriedColourScheme
jalview.schemes.BuriedColourScheme
|
1.0100%
|
|
|
jalview.datamodel.Profiles
jalview.datamodel.Profiles
|
0.866666786.7%
|
|
|
jalview.jbgui.GSliderPanel
jalview.jbgui.GSliderPanel
|
0.7323943473.2%
|
|
|
jalview.workers.SecondaryStructureConsensusThread
jalview.workers.SecondaryStructureConsensusThread
|
0.6747967667.5%
|
|
|
jalview.schemes.ScoreColourScheme
jalview.schemes.ScoreColourScheme
|
0.562556.2%
|
|
|
jalview.gui.SliderPanel
jalview.gui.SliderPanel
|
0.554263655.4%
|
|
|
jalview.schemes.TaylorColourScheme
jalview.schemes.TaylorColourScheme
|
0.550%
|
|
|
jalview.schemes.FlowerColourScheme
jalview.schemes.FlowerColourScheme
|
0.550%
|
|
|
jalview.schemes.ZappoColourScheme
jalview.schemes.ZappoColourScheme
|
0.550%
|
|
|
jalview.schemes.NucleotideAmbiguityColourScheme
jalview.schemes.NucleotideAmbiguityColourScheme
|
0.550%
|
|
|
jalview.schemes.PurinePyrimidineColourScheme
jalview.schemes.PurinePyrimidineColourScheme
|
0.550%
|
|
|
jalview.schemes.NucleotideColourScheme
jalview.schemes.NucleotideColourScheme
|
0.550%
|
|
|
jalview.schemes.BlossomColourScheme
jalview.schemes.BlossomColourScheme
|
0.550%
|
|
|
jalview.schemes.SunsetColourScheme
jalview.schemes.SunsetColourScheme
|
0.550%
|
|
|
jalview.schemes.OceanColourScheme
jalview.schemes.OceanColourScheme
|
0.550%
|
|
|
jalview.util.UrlLink
jalview.util.UrlLink
|
0.4886363748.9%
|
|
|
jalview.schemes.ResidueColourScheme
jalview.schemes.ResidueColourScheme
|
0.4285714342.9%
|
|
|
jalview.util.ShortcutKeyMaskExWrapper11
jalview.util.ShortcutKeyMaskExWrapper11
|
0.4166666641.7%
|
|
|
jalview.gui.ColourMenuHelper
jalview.gui.ColourMenuHelper
|
0.4152542441.5%
|
|
|
jalview.datamodel.Profile
jalview.datamodel.Profile
|
0.4098360541%
|
|
|
jalview.schemes.HydrophobicColourScheme
jalview.schemes.HydrophobicColourScheme
|
0.440%
|
|
|
jalview.util.MessageManager
jalview.util.MessageManager
|
0.3571428735.7%
|
|
|
jalview.gui.PopupMenu
jalview.gui.PopupMenu
|
0.3339399433.4%
|
|
|
jalview.workers.AlignCalcManager
jalview.workers.AlignCalcManager
|
0.3154761831.5%
|
|
|
jalview.ws.rest.RestServiceDescription
jalview.ws.rest.RestServiceDescription
|
0.31531.5%
|
|
|
jalview.schemes.JalviewColourScheme
jalview.schemes.JalviewColourScheme
|
0.285714328.6%
|
|
|
jalview.datamodel.ResidueCount
jalview.datamodel.ResidueCount
|
0.2727272827.3%
|
|
|
jalview.analysis.Conservation
jalview.analysis.Conservation
|
0.253623225.4%
|
|
|
jalview.analysis.AAFrequency
jalview.analysis.AAFrequency
|
0.253411325.3%
|
|
|
jalview.gui.PaintRefresher
jalview.gui.PaintRefresher
|
0.2464788724.6%
|
|
|
jalview.schemes.ColourSchemes
jalview.schemes.ColourSchemes
|
0.2456140424.6%
|
|
|
jalview.ws.rest.params.Alignment
jalview.ws.rest.params.Alignment
|
0.2435897424.4%
|
|
|
jalview.io.FileFormats
jalview.io.FileFormats
|
0.2424%
|
|
|
jalview.ws.rest.InputType
jalview.ws.rest.InputType
|
0.2056074720.6%
|
|
|
jalview.renderer.ResidueShader
jalview.renderer.ResidueShader
|
0.2012195120.1%
|
|
|
jalview.schemes.IdColourScheme
jalview.schemes.IdColourScheme
|
0.1739130517.4%
|
|
|
jalview.analysis.AlignmentAnnotationUtils
jalview.analysis.AlignmentAnnotationUtils
|
0.1603773516%
|
|
|
jalview.gui.Desktop.MyDesktopManager
jalview.gui.Desktop.MyDesktopManager
|
0.1555555615.6%
|
|
|
jalview.schemes.TCoffeeColourScheme
jalview.schemes.TCoffeeColourScheme
|
0.1475409914.8%
|
|
|
jalview.datamodel.SequenceGroup
jalview.datamodel.SequenceGroup
|
0.1407702614.1%
|
|
|
jalview.analysis.AnnotationSorter
jalview.analysis.AnnotationSorter
|
0.132812513.3%
|
|
|
jalview.viewmodel.AlignmentViewport
jalview.viewmodel.AlignmentViewport
|
0.1287404312.9%
|
|
|
jalview.ws.rest.params.SeqGroupIndexVector
jalview.ws.rest.params.SeqGroupIndexVector
|
0.12408759412.4%
|
|
|
jalview.schemes.Blosum62ColourScheme
jalview.schemes.Blosum62ColourScheme
|
0.1176470611.8%
|
|
|
jalview.util.ShortcutKeyMaskExWrapper
jalview.util.ShortcutKeyMaskExWrapper
|
0.1111111111.1%
|
|
|
jalview.ws.rest.RestClient
jalview.ws.rest.RestClient
|
0.1111111111.1%
|
|
|
jalview.ws.rest.params.AnnotationFile
jalview.ws.rest.params.AnnotationFile
|
0.10256410410.3%
|
|
|
jalview.util.StringUtils
jalview.util.StringUtils
|
0.094395289.4%
|
|
|
jalview.gui.Console
jalview.gui.Console
|
0.082568818.3%
|
|
|
jalview.schemes.RNAHelicesColour
jalview.schemes.RNAHelicesColour
|
0.082191788.2%
|
|
|
jalview.gui.JvSwingUtils
jalview.gui.JvSwingUtils
|
0.081632658.2%
|
|
|
jalview.urls.UrlProvider
jalview.urls.UrlProvider
|
0.079207927.9%
|
|
|
jalview.datamodel.Annotation
jalview.datamodel.Annotation
|
0.0714285757.1%
|
|
|
jalview.schemes.PIDColourScheme
jalview.schemes.PIDColourScheme
|
0.066666676.7%
|
|
|
jalview.viewmodel.styles.ViewStyle
jalview.viewmodel.styles.ViewStyle
|
0.065217396.5%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.063694276.4%
|
|
|
jalview.gui.AlignmentPanel
jalview.gui.AlignmentPanel
|
0.066%
|
|
|
jalview.io.FileFormat
jalview.io.FileFormat
|
0.058394165.8%
|
|
|
jalview.urls.CustomUrlProvider
jalview.urls.CustomUrlProvider
|
0.0569620245.7%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.0540308775.4%
|
|
|
jalview.datamodel.SecondaryStructureCount
jalview.datamodel.SecondaryStructureCount
|
0.0468754.7%
|
|
|
jalview.ws.jws2.JabaWsServerQuery
jalview.ws.jws2.JabaWsServerQuery
|
0.0416666684.2%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.0413602934.1%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.039370083.9%
|
|
|
jalview.urls.IdentifiersUrlProvider
jalview.urls.IdentifiersUrlProvider
|
0.0366972463.7%
|
|
|
jalview.gui.Desktop
jalview.gui.Desktop
|
0.036446473.6%
|
|
|
jalview.bin.Cache
jalview.bin.Cache
|
0.028925622.9%
|
|
|
jalview.gui.AlignFrame
jalview.gui.AlignFrame
|
0.0280879872.8%
|
|
|
jalview.gui.AnnotationPanel
jalview.gui.AnnotationPanel
|
0.0252100842.5%
|
|
|
jalview.util.Platform
jalview.util.Platform
|
0.0235849062.4%
|
|
|
jalview.datamodel.AlignmentAnnotation
jalview.datamodel.AlignmentAnnotation
|
0.021739132.2%
|
|
|
jalview.analysis.AlignmentUtils
jalview.analysis.AlignmentUtils
|
0.0206117022.1%
|
|
|
jalview.structure.StructureSelectionManager
jalview.structure.StructureSelectionManager
|
0.0198265182%
|
|
|
jalview.datamodel.HiddenSequences
jalview.datamodel.HiddenSequences
|
0.018264841.8%
|
|
|
jalview.schemes.ClustalxColourScheme
jalview.schemes.ClustalxColourScheme
|
0.0169491531.7%
|
|
|
jalview.ws.jws2.Jws2Discoverer
jalview.ws.jws2.Jws2Discoverer
|
0.0158415851.6%
|
|
|
jalview.gui.AlignViewport
jalview.gui.AlignViewport
|
0.013698631.4%
|
|
|
jalview.util.DBRefUtils
jalview.util.DBRefUtils
|
0.0120481921.2%
|
|
|
jalview.gui.IdPanel
jalview.gui.IdPanel
|
0.008968610.9%
|
|
|
jalview.gui.SequenceFetcher
jalview.gui.SequenceFetcher
|
0.0085106380.9%
|
|
|
jalview.gui.IdCanvas
jalview.gui.IdCanvas
|
0.0070175440.7%
|
|
