|
com.stevesoft.pat.patInf
com.stevesoft.pat.patInf
|
1.0100%
|
|
|
com.stevesoft.pat.Rthings
com.stevesoft.pat.Rthings
|
0.8461538684.6%
|
|
|
jalview.datamodel.Profiles
jalview.datamodel.Profiles
|
0.7333333573.3%
|
|
|
com.stevesoft.pat.OrMark
com.stevesoft.pat.OrMark
|
0.62562.5%
|
|
|
com.stevesoft.pat.wrap.StringWrap
com.stevesoft.pat.wrap.StringWrap
|
0.62562.5%
|
|
|
jalview.analysis.ParseProperties
jalview.analysis.ParseProperties
|
0.6176470561.8%
|
|
|
com.stevesoft.pat.SubMark
com.stevesoft.pat.SubMark
|
0.660%
|
|
|
com.stevesoft.pat.StrPos
com.stevesoft.pat.StrPos
|
0.523255852.3%
|
|
|
com.stevesoft.pat.oneChar
com.stevesoft.pat.oneChar
|
0.4571428645.7%
|
|
|
com.stevesoft.pat.Bracket
com.stevesoft.pat.Bracket
|
0.4545%
|
|
|
com.stevesoft.pat.Range
com.stevesoft.pat.Range
|
0.431818243.2%
|
|
|
jalview.workers.ConsensusThread
jalview.workers.ConsensusThread
|
0.3762376337.6%
|
|
|
com.stevesoft.pat.FastMulti
com.stevesoft.pat.FastMulti
|
0.361111136.1%
|
|
|
com.stevesoft.pat.DotMulti
com.stevesoft.pat.DotMulti
|
0.347826134.8%
|
|
|
jalview.datamodel.Profile
jalview.datamodel.Profile
|
0.344262334.4%
|
|
|
com.stevesoft.pat.Pattern
com.stevesoft.pat.Pattern
|
0.326388932.6%
|
|
|
com.stevesoft.pat.Or
com.stevesoft.pat.Or
|
0.294871829.5%
|
|
|
com.stevesoft.pat.Regex
com.stevesoft.pat.Regex
|
0.2727%
|
|
|
jalview.datamodel.ResidueCount
jalview.datamodel.ResidueCount
|
0.2290909122.9%
|
|
|
com.stevesoft.pat.patInt
com.stevesoft.pat.patInt
|
0.220%
|
|
|
jalview.analysis.AAFrequency
jalview.analysis.AAFrequency
|
0.1812865418.1%
|
|
|
com.stevesoft.pat.RegRes
com.stevesoft.pat.RegRes
|
0.152173915.2%
|
|
|
jalview.analysis.AnnotationSorter
jalview.analysis.AnnotationSorter
|
0.132812513.3%
|
|
|
jalview.datamodel.Annotation
jalview.datamodel.Annotation
|
0.11428571511.4%
|
|
|
com.stevesoft.pat.parsePerl
com.stevesoft.pat.parsePerl
|
0.098639469.9%
|
|
|
jalview.analysis.Conservation
jalview.analysis.Conservation
|
0.0772946857.7%
|
|
|
com.stevesoft.pat.RegOpt
com.stevesoft.pat.RegOpt
|
0.06474826.5%
|
|
|
jalview.datamodel.AlignmentAnnotation
jalview.datamodel.AlignmentAnnotation
|
0.064009666.4%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.059055125.9%
|
|
|
jalview.bin.Console
jalview.bin.Console
|
0.0541871945.4%
|
|
|
jalview.workers.AlignCalcManager
jalview.workers.AlignCalcManager
|
0.053571435.4%
|
|
|
jalview.util.ColorUtils
jalview.util.ColorUtils
|
0.0445682444.5%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.0367647073.7%
|
|
|
jalview.structure.StructureSelectionManager
jalview.structure.StructureSelectionManager
|
0.023543992.4%
|
|
|
jalview.util.Format
jalview.util.Format
|
0.0227743282.3%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.0197255572%
|
|
|
jalview.gui.AlignmentPanel
jalview.gui.AlignmentPanel
|
0.0164705891.6%
|
|
|
jalview.viewmodel.AlignmentViewport
jalview.viewmodel.AlignmentViewport
|
0.0139178851.4%
|
|
|
jalview.renderer.ResidueShader
jalview.renderer.ResidueShader
|
0.01219512151.2%
|
|
|
jalview.structures.models.AAStructureBindingModel
jalview.structures.models.AAStructureBindingModel
|
0.0104529621%
|
|
|
jalview.bin.argparser.BootstrapArgs
jalview.bin.argparser.BootstrapArgs
|
0.0082644620.8%
|
|
|
jalview.analysis.scoremodels.ScoreMatrix
jalview.analysis.scoremodels.ScoreMatrix
|
0.0082304520.8%
|
|
|
jalview.gui.AlignViewport
jalview.gui.AlignViewport
|
0.004566210.5%
|
|
|
jalview.bin.Jalview
jalview.bin.Jalview
|
0.00359712240.4%
|
|
|
jalview.gui.StructureViewerBase
jalview.gui.StructureViewerBase
|
0.00288600290.3%
|
|
|
com.stevesoft.pat.CaseMgr
com.stevesoft.pat.CaseMgr
|
0.00278551530.3%
|
|
