|
jalview.ws.WSClient
jalview.ws.WSClient
|
1.0100%
|
|
|
jalview.util.LinkedIdentityHashSet
jalview.util.LinkedIdentityHashSet
|
0.7727272577.3%
|
|
|
jalview.util.LinkedIdentityHashSet.IdentityWrapper
jalview.util.LinkedIdentityHashSet.IdentityWrapper
|
0.7142857371.4%
|
|
|
jalview.datamodel.HiddenCursorPosition
jalview.datamodel.HiddenCursorPosition
|
0.4285714342.9%
|
|
|
jalview.io.AlignFile
jalview.io.AlignFile
|
0.356164435.6%
|
|
|
jalview.ws.jws2.MsaWSClient
jalview.ws.jws2.MsaWSClient
|
0.355704735.6%
|
|
|
jalview.workers.SecondaryStructureConsensusThread
jalview.workers.SecondaryStructureConsensusThread
|
0.3407407434.1%
|
|
|
jalview.io.FastaFile
jalview.io.FastaFile
|
0.315315331.5%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.3110236231.1%
|
|
|
jalview.ws.jws2.JabaPreset
jalview.ws.jws2.JabaPreset
|
0.2727272827.3%
|
|
|
jalview.util.MessageManager
jalview.util.MessageManager
|
0.2380952423.8%
|
|
|
jalview.util.MapList
jalview.util.MapList
|
0.2153846221.5%
|
|
|
jalview.ws.jws2.jabaws2.Jws2Instance
jalview.ws.jws2.jabaws2.Jws2Instance
|
0.2068965620.7%
|
|
|
jalview.gui.JvSwingUtils
jalview.gui.JvSwingUtils
|
0.1836734718.4%
|
|
|
jalview.datamodel.Profile
jalview.datamodel.Profile
|
0.1639344216.4%
|
|
|
jalview.workers.AlignCalcManager
jalview.workers.AlignCalcManager
|
0.1547619115.5%
|
|
|
jalview.io.FormatAdapter
jalview.io.FormatAdapter
|
0.1515%
|
|
|
jalview.ws.jws2.Jws2Discoverer
jalview.ws.jws2.Jws2Discoverer
|
0.1386138613.9%
|
|
|
jalview.datamodel.AlignedCodonFrame
jalview.datamodel.AlignedCodonFrame
|
0.1365187813.7%
|
|
|
jalview.io.FileParse
jalview.io.FileParse
|
0.1357340713.6%
|
|
|
jalview.util.QuickSort
jalview.util.QuickSort
|
0.10679611610.7%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.1029411810.3%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.086397068.6%
|
|
|
jalview.ws.jws2.Jws2Client
jalview.ws.jws2.Jws2Client
|
0.0843373468.4%
|
|
|
jalview.util.MappingUtils
jalview.util.MappingUtils
|
0.0775862047.8%
|
|
|
jalview.analysis.AAFrequency
jalview.analysis.AAFrequency
|
0.070175447%
|
|
|
jalview.log.JLogger
jalview.log.JLogger
|
0.065934076.6%
|
|
|
jalview.io.AppletFormatAdapter
jalview.io.AppletFormatAdapter
|
0.065217396.5%
|
|
|
jalview.analysis.AlignmentUtils
jalview.analysis.AlignmentUtils
|
0.064084516.4%
|
|
|
jalview.datamodel.Mapping
jalview.datamodel.Mapping
|
0.0519480525.2%
|
|
|
jalview.bin.Console
jalview.bin.Console
|
0.0492610824.9%
|
|
|
jalview.datamodel.SecondaryStructureCount
jalview.datamodel.SecondaryStructureCount
|
0.0468754.7%
|
|
|
jalview.ws.jws2.JabaParamStore
jalview.ws.jws2.JabaParamStore
|
0.0416666684.2%
|
|
|
jalview.analysis.AlignmentAnnotationUtils
jalview.analysis.AlignmentAnnotationUtils
|
0.033018873.3%
|
|
|
jalview.bin.Cache
jalview.bin.Cache
|
0.0316804423.2%
|
|
|
jalview.io.FileFormat
jalview.io.FileFormat
|
0.0300751893%
|
|
|
jalview.datamodel.AlignedCodonFrame.SequenceToSequenceMapping
jalview.datamodel.AlignedCodonFrame.SequenceToSequenceMapping
|
0.0267857152.7%
|
|
|
jalview.util.StringUtils
jalview.util.StringUtils
|
0.0202898552%
|
|
|
jalview.util.Platform
jalview.util.Platform
|
0.0188679251.9%
|
|
|
jalview.datamodel.HiddenColumnsCursor
jalview.datamodel.HiddenColumnsCursor
|
0.0156251.6%
|
|
|
jalview.viewmodel.styles.ViewStyle
jalview.viewmodel.styles.ViewStyle
|
0.0144927541.4%
|
|
|
jalview.analysis.AlignSeq
jalview.analysis.AlignSeq
|
0.01275510251.3%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.0127388541.3%
|
|
|
jalview.datamodel.HiddenSequences
jalview.datamodel.HiddenSequences
|
0.009132420.9%
|
|
|
jalview.gui.AlignFrame
jalview.gui.AlignFrame
|
0.0072891360.7%
|
|
|
jalview.viewmodel.AlignmentViewport
jalview.viewmodel.AlignmentViewport
|
0.0070323490.7%
|
|
|
jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
|
0.00235849060.2%
|
|
