Build #1

Build: #1 failed

Job: Clover and Tests failed

Stages & jobs

  1. Default Stage

Job result summary

Completed
Duration
12 minutes
Agent
Default Agent
Revision
13cb023f1bf8876cde68c524bb7b8a0d3526205f 13cb023f1bf8876cde68c524bb7b8a0d3526205f
Total tests
1899

Tests

  • 1,899 tests in total
  • 7 tests failed
  • 7 failures are new
  • 7 minutes taken in total.
New test failures 7
Status Test Duration
Collapse Failed ScoreMatrixTest testComputePairwiseScores History
< 1 sec
Classname: java.lang.AssertionError
Message: expected [15.0] but found [0.0]
Stacktrace:
java.lang.AssertionError: expected [15.0] but found [0.0]
	at org.testng.Assert.fail(Assert.java:94)
	at org.testng.Assert.failNotEquals(Assert.java:496)
	at org.testng.Assert.assertEquals(Assert.java:125)
	at org.testng.Assert.assertEquals(Assert.java:167)
(44 more lines...)
Collapse Failed ScoreMatrixTest testIsSymmetric History
< 1 sec
Classname: java.lang.AssertionError
Message: expected [true] but found [false]
Stacktrace:
java.lang.AssertionError: expected [true] but found [false]
	at org.testng.Assert.fail(Assert.java:94)
	at org.testng.Assert.failNotEquals(Assert.java:496)
	at org.testng.Assert.assertTrue(Assert.java:42)
	at org.testng.Assert.assertTrue(Assert.java:52)
(44 more lines...)
Collapse Failed HiDPISettingTest2 testHiDPISettings(1) History
10 secs
Classname: java.lang.AssertionError
Message: Did not find Debug scale message line 'Desktop graphics transform scale='
Stacktrace:
java.lang.AssertionError: Did not find Debug scale message line 'Desktop graphics transform scale='
	at org.testng.Assert.fail(Assert.java:94)
	at jalview.bin.HiDPISettingTest2.__CLR4_4_1j7qxj94asg(HiDPISettingTest2.java:222)
	at jalview.bin.HiDPISettingTest2.testHiDPISettings(HiDPISettingTest2.java:164)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
(41 more lines...)
Collapse Failed HiDPISettingTest2 testHiDPISettings(10) History
10 secs
Classname: java.lang.AssertionError
Message: Did not find Debug scale message line 'Desktop graphics transform scale='
Stacktrace:
java.lang.AssertionError: Did not find Debug scale message line 'Desktop graphics transform scale='
	at org.testng.Assert.fail(Assert.java:94)
	at jalview.bin.HiDPISettingTest2.__CLR4_4_1j7qxj94asg(HiDPISettingTest2.java:222)
	at jalview.bin.HiDPISettingTest2.testHiDPISettings(HiDPISettingTest2.java:164)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
(41 more lines...)
Collapse Failed HiDPISettingTest2 testHiDPISettings(2) History
10 secs
Classname: java.lang.AssertionError
Message: Did not find Debug scale message line 'Desktop graphics transform scale='
Stacktrace:
java.lang.AssertionError: Did not find Debug scale message line 'Desktop graphics transform scale='
	at org.testng.Assert.fail(Assert.java:94)
	at jalview.bin.HiDPISettingTest2.__CLR4_4_1j7qxj94asg(HiDPISettingTest2.java:222)
	at jalview.bin.HiDPISettingTest2.testHiDPISettings(HiDPISettingTest2.java:164)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
(41 more lines...)
Collapse Failed HiDPISettingTest2 testHiDPISettings(4) History
10 secs
Classname: java.lang.AssertionError
Message: Did not find Debug scale message line 'Desktop graphics transform scale='
Stacktrace:
java.lang.AssertionError: Did not find Debug scale message line 'Desktop graphics transform scale='
	at org.testng.Assert.fail(Assert.java:94)
	at jalview.bin.HiDPISettingTest2.__CLR4_4_1j7qxj94asg(HiDPISettingTest2.java:222)
	at jalview.bin.HiDPISettingTest2.testHiDPISettings(HiDPISettingTest2.java:164)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
(41 more lines...)
Collapse Failed Log4jTest testLog4j History
10 secs
Classname: java.lang.AssertionError
Message: Did not find Log4j Test message line 'Logging to STDERR'
Stacktrace:
java.lang.AssertionError: Did not find Log4j Test message line 'Logging to STDERR'
	at org.testng.Assert.fail(Assert.java:94)
	at jalview.util.Log4jTest.__CLR4_4_1kdolov3q0e(Log4jTest.java:194)
	at jalview.util.Log4jTest.testLog4j(Log4jTest.java:160)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
(41 more lines...)

Error summary

The build generated some errors. See the full build log for more details.

WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by jalview.gui.Desktop (file:/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDB723-JOB1/build/clover/clover-classes/) to field sun.awt.X11.XToolkit.awtAppClassName
WARNING: Please consider reporting this to the maintainers of jalview.gui.Desktop
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release

1819 tests completed, 7 failed
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by jalview.gui.Desktop (file:/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDB723-JOB1/build/clover/clover-classes/) to field sun.awt.X11.XToolkit.awtAppClassName
WARNING: Please consider reporting this to the maintainers of jalview.gui.Desktop
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by jalview.gui.Desktop (file:/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDB723-JOB1/build/clover/clover-classes/) to field sun.awt.X11.XToolkit.awtAppClassName
WARNING: Please consider reporting this to the maintainers of jalview.gui.Desktop
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release

FAILURE: Build failed with an exception.

* Where:
Build file '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDB723-JOB1/build.gradle' line: 1967

* What went wrong:
Failed tests!

* Try:
> Run with --stacktrace option to get the stack trace.
> Run with --info or --debug option to get more log output.
> Run with --scan to get full insights.

* Get more help at https://help.gradle.org

BUILD FAILED in 10m 55s