Class jalview.structures.models.AAStructureBindingModelTest
| Test |
Duration |
Result |
| testBuildColoursMap |
0.028s |
passed |
| testFindSuperposableResidues |
0.001s |
passed |
| testFindSuperposableResidues_hiddenColumn |
0s |
passed |
| testImportPDBPreservesChainMappings |
0.749s |
passed |
Operating headless display=null nographicsallowed=true
(C) 2015 Jmol Development
Jmol Version: 15.1.3 2018-01-29 21:09
java.vendor: Java: Eclipse Adoptium
java.version: Java 11.0.25
os.name: Linux
Access: ALL
memory: 450.1/891.3
processors available: 4
useCommandThread: false
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@67ff833b
The Resolver thinks Pdb
COMPLEX (ANTI-ONCOGENE/ANKYRIN REPEATS) 30-SEP-96 1YCS
1YCS
reading 10 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
Default Van der Waals type for model set to Jmol
10 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Time for creating model: 0 ms
Operating headless display=null nographicsallowed=true
(C) 2015 Jmol Development
Jmol Version: 15.1.3 2018-01-29 21:09
java.vendor: Java: Eclipse Adoptium
java.version: Java 11.0.25
os.name: Linux
Access: ALL
memory: 435.8/891.3
processors available: 4
useCommandThread: false
The Resolver thinks Pdb
HYDROLASE 09-SEP-09 3A6S
3A6S
reading 5 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
Default Van der Waals type for model set to Jmol
5 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Time for creating model: 1 ms
Operating headless display=null nographicsallowed=true
(C) 2015 Jmol Development
Jmol Version: 15.1.3 2018-01-29 21:09
java.vendor: Java: Eclipse Adoptium
java.version: Java 11.0.25
os.name: Linux
Access: ALL
memory: 436.5/891.3
processors available: 4
useCommandThread: false
The Resolver thinks Pdb
STRUCTURAL GENOMICS 04-MAR-03 1OOT
1OOT
reading 5 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
model 1.1 alternative locations: A
Default Van der Waals type for model set to Jmol
5 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Time for creating model: 0 ms
File format identified as Fasta
Attempting to connect with ClustalWS...
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@2f2265e9
Attempting to connect with ClustalOWS...
Operating headless display=null nographicsallowed=true
(C) 2015 Jmol Development
Jmol Version: 15.1.3 2018-01-29 21:09
java.vendor: Java: Eclipse Adoptium
java.version: Java 11.0.25
os.name: Linux
Access: ALL
memory: 444.4/891.3
processors available: 4
useCommandThread: false
The Resolver thinks Pdb
COMPLEX (ANTI-ONCOGENE/ANKYRIN REPEATS) 30-SEP-96 1YCS
1YCS
reading 10 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
Default Van der Waals type for model set to Jmol
10 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Time for creating model: 1 ms
Operating headless display=null nographicsallowed=true
(C) 2015 Jmol Development
Jmol Version: 15.1.3 2018-01-29 21:09
java.vendor: Java: Eclipse Adoptium
java.version: Java 11.0.25
os.name: Linux
Access: ALL
memory: 437.2/891.3
processors available: 4
useCommandThread: false
The Resolver thinks Pdb
HYDROLASE 09-SEP-09 3A6S
3A6S
reading 5 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
Default Van der Waals type for model set to Jmol
5 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@7510c024
Time for creating model: 0 ms
Operating headless display=null nographicsallowed=true
(C) 2015 Jmol Development
Jmol Version: 15.1.3 2018-01-29 21:09
java.vendor: Java: Eclipse Adoptium
java.version: Java 11.0.25
os.name: Linux
Access: ALL
memory: 437.5/891.3
processors available: 4
useCommandThread: false
The Resolver thinks Pdb
STRUCTURAL GENOMICS 04-MAR-03 1OOT
1OOT
reading 5 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
model 1.1 alternative locations: A
Default Van der Waals type for model set to Jmol
5 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Attempting to connect with TcoffeeWS...
Time for creating model: 0 ms
Operating headless display=null nographicsallowed=true
(C) 2015 Jmol Development
Jmol Version: 15.1.3 2018-01-29 21:09
java.vendor: Java: Eclipse Adoptium
java.version: Java 11.0.25
os.name: Linux
Access: ALL
memory: 437.4/891.3
processors available: 4
useCommandThread: false
The Resolver thinks Pdb
COMPLEX (ANTI-ONCOGENE/ANKYRIN REPEATS) 30-SEP-96 1YCS
1YCS
reading 10 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
Default Van der Waals type for model set to Jmol
10 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Time for creating model: 1 ms
Operating headless display=null nographicsallowed=true
(C) 2015 Jmol Development
Jmol Version: 15.1.3 2018-01-29 21:09
java.vendor: Java: Eclipse Adoptium
java.version: Java 11.0.25
os.name: Linux
Access: ALL
memory: 437.7/891.3
processors available: 4
useCommandThread: false
The Resolver thinks Pdb
HYDROLASE 09-SEP-09 3A6S
3A6S
reading 5 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
Default Van der Waals type for model set to Jmol
5 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Time for creating model: 0 ms
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@5675b333
Operating headless display=null nographicsallowed=true
(C) 2015 Jmol Development
Jmol Version: 15.1.3 2018-01-29 21:09
java.vendor: Java: Eclipse Adoptium
java.version: Java 11.0.25
os.name: Linux
Access: ALL
memory: 438.0/891.3
processors available: 4
useCommandThread: false
Attempting to connect with ProbconsWS...
The Resolver thinks Pdb
STRUCTURAL GENOMICS 04-MAR-03 1OOT
1OOT
reading 5 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
model 1.1 alternative locations: A
Default Van der Waals type for model set to Jmol
5 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Time for creating model: 0 ms
Operating headless display=null nographicsallowed=true
(C) 2015 Jmol Development
Jmol Version: 15.1.3 2018-01-29 21:09
java.vendor: Java: Eclipse Adoptium
java.version: Java 11.0.25
os.name: Linux
Access: ALL
memory: 439.5/891.3
processors available: 4
useCommandThread: false
The Resolver thinks Pdb
COMPLEX (ANTI-ONCOGENE/ANKYRIN REPEATS) 30-SEP-96 1YCS
1YCS
reading 10 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
Default Van der Waals type for model set to Jmol
10 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Time for creating model: 1 ms
Operating headless display=null nographicsallowed=true
(C) 2015 Jmol Development
Jmol Version: 15.1.3 2018-01-29 21:09
java.vendor: Java: Eclipse Adoptium
java.version: Java 11.0.25
os.name: Linux
Access: ALL
memory: 438.5/891.3
processors available: 4
useCommandThread: false
The Resolver thinks Pdb
HYDROLASE 09-SEP-09 3A6S
3A6S
reading 5 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
Default Van der Waals type for model set to Jmol
5 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Time for creating model: 0 ms
Discovered service: http://www.compbio.dundee.ac.uk/jabaws jalview.ws.jws2.jabaws2.Jws2Instance@740f9fb9
Operating headless display=null nographicsallowed=true
(C) 2015 Jmol Development
Jmol Version: 15.1.3 2018-01-29 21:09
java.vendor: Java: Eclipse Adoptium
java.version: Java 11.0.25
os.name: Linux
Access: ALL
memory: 438.3/891.3
processors available: 4
useCommandThread: false
The Resolver thinks Pdb
STRUCTURAL GENOMICS 04-MAR-03 1OOT
1OOT
reading 5 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
model 1.1 alternative locations: A
Default Van der Waals type for model set to Jmol
5 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Time for creating model: 1 ms
Attempting to connect with MSAprobsWS...
Operating headless display=null nographicsallowed=true
(C) 2015 Jmol Development
Jmol Version: 15.1.3 2018-01-29 21:09
java.vendor: Java: Eclipse Adoptium
java.version: Java 11.0.25
os.name: Linux
Access: ALL
memory: 439.4/891.3
processors available: 4
useCommandThread: false
The Resolver thinks Pdb
HYDROLASE 09-SEP-09 3A6S
3A6S
reading 10 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
Default Van der Waals type for model set to Jmol
10 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Time for creating model: 1 ms
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
Feb 28, 2025 2:55:49 PM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
INFO - Building web services menu for jpred4
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
INFO - Building web services menu for jpred4
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
INFO - Building web services menu for jpred4
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
INFO - Building web services menu for jpred4
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
Feb 28, 2025 2:55:51 PM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
WARN - java.lang.NullPointerException
java.lang.NullPointerException: null
at jalview.ws2.gui.WebServicesMenuManager.isActionEnabled(WebServicesMenuManager.java:440) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addEntriesForAction(WebServicesMenuManager.java:180) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.addOneshotEntries(WebServicesMenuManager.java:172) ~[clover-classes/:?]
at jalview.ws2.gui.WebServicesMenuManager.setServices(WebServicesMenuManager.java:110) ~[clover-classes/:?]
at jalview.gui.AlignFrame.lambda$new$1(AlignFrame.java:986) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.fireServicesChanged(AbstractWebServiceDiscoverer.java:199) ~[clover-classes/:?]
at jalview.ws2.client.api.AbstractWebServiceDiscoverer.lambda$startDiscoverer$1(AbstractWebServiceDiscoverer.java:178) ~[clover-classes/:?]
at java.util.concurrent.CompletableFuture.uniHandle(CompletableFuture.java:930) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:907) [?:?]
at java.util.concurrent.CompletableFuture.postComplete(CompletableFuture.java:506) [?:?]
at java.util.concurrent.CompletableFuture.postFire(CompletableFuture.java:610) [?:?]
at java.util.concurrent.CompletableFuture$UniHandle.tryFire(CompletableFuture.java:910) [?:?]
at java.util.concurrent.CompletableFuture$Completion.exec(CompletableFuture.java:479) [?:?]
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:290) [?:?]
at java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1020) [?:?]
at java.util.concurrent.ForkJoinPool.scan(ForkJoinPool.java:1656) [?:?]
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1594) [?:?]
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:183) [?:?]
INFO - Reloading services for jalview.ws2.client.jpred4.JPred4WSDiscoverer
INFO - Building web service menu for slivka
INFO - Fetching list of services from https://www.compbio.dundee.ac.uk/jpred4/
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
Feb 28, 2025 2:55:52 PM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
Feb 28, 2025 2:55:55 PM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
Feb 28, 2025 2:55:56 PM compbio.ws.client.Jws2Client connect
INFO: Connected successfully!
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka