Class jalview.io.gff.ExonerateHelperTest

6

tests

0

failures

0

ignored

0.018s

duration

100%

successful

Test Duration Result
testAddExonerateGffToAlignment 0.015s passed
testGetMappingType 0s passed
testProcessGffSimilarity_protein2dna_forward_querygff 0.001s passed
testProcessGffSimilarity_protein2dna_forward_targetgff 0.001s passed
testProcessGffSimilarity_protein2dna_reverse_querygff 0s passed
testProcessGffSimilarity_protein2dna_reverse_targetgff 0.001s passed
File format identified as Fasta
File format identified as Features
INFO - Rebuiling WS menu
INFO - Building web service menu for slivka
Ignoring unknown pragma: ##source-version exonerate:protein2genome:local 2.2.0
Ignoring unknown pragma: ##date 2015-01-16
Ignoring unknown pragma: ##type DNA
INFO - Building web services menu for jobs dispatcher
INFO - Building web services menu for jpred4
ERROR - SO term cds invalid