Class jalview.datamodel.SequenceTest

all > jalview.datamodel > SequenceTest
50

tests
0

failures
0

ignored
0.047s

duration
100%

successful
Test Duration Result
testAddAlignmentAnnotation 0s passed
testAddDBRef 0.001s passed
testAddPDBId 0.001s passed
testAddSequenceFeatures 0.001s passed
testCheckValidRange 0.002s passed
testCopyConstructor_noDataset 0.001s passed
testCopyConstructor_withDataset 0.001s passed
testCreateDatasetSequence 0.001s passed
testDeleteChars 0.001s passed
testDeleteChars_withDbRefsAndFeatures 0.001s passed
testDeleteChars_withGaps 0.001s passed
testDeriveSequence_existingDataset 0.002s passed
testDeriveSequence_noDatasetGapped 0.001s passed
testDeriveSequence_noDatasetUngapped 0.001s passed
testFindFeatures 0.001s passed
testFindIndex 0s passed
testFindIndex_withCursor 0s passed
testFindPosition 0.001s passed
testFindPositionMap 0.001s passed
testFindPosition_withCursor 0.001s passed
testFindPosition_withCursorAndEdits 0.001s passed
testFindPositions 0.001s passed
testGapBitset 0.001s passed
testGapMap 0.001s passed
testGetAlignmentAnnotations_forCalcIdAndLabel 0.001s passed
testGetAlignmentAnnotations_forCalcIdLabelAndDescription 0.001s passed
testGetAnnotation 0.001s passed
testGetAnnotation_forLabel 0.001s passed
testGetCharAt 0.001s passed
testGetPrimaryDBRefs_nucleotide 0.001s passed
testGetPrimaryDBRefs_peptide 0.001s passed
testGetRootDatasetSequence_datasetExplicit_returnDataset 0.001s passed
testGetRootDatasetSequence_datasetImplicit_returnDataset 0.001s passed
testGetRootDatasetSequence_datasetIsNull_returnNull 0.001s passed
testGetRootDatasetSequence_nestedDatasets_returnLastDataset 0.001s passed
testGetSequence 0.001s passed
testGetSequenceFeatures 0.001s passed
testGetStartGetEnd 0.001s passed
testGetSubsequence 0.001s passed
testInsertCharAt 0.001s passed
testInsertGapsAndGapmaps 0.001s passed
testIsProtein 0.001s passed
testIsProteinWithXorNAmbiguityCodes 0.001s passed
testLocateVisibleStartofSequence 0.002s passed
testReplace 0s passed
testSetDatasetSequence_cascading 0s passed
testSetDatasetSequence_toSelf 0s passed
testSetName 0.001s passed
testTransferAnnotation 0.001s passed
testUpdatePDBIds 0.001s passed 
>>>>>> 2
>SEQ1/1-50
PTEIICYRTWRAPNNPMRWNLIDVIILWTGQRPNKGNMIPESDFHI-WDWT
>SEQ2/1-50
PTEIKCYRTWEAPNNPMRWNLIDVIILWTGQRPNKENMIPESDFAI-WDWT
>SEQ3/1-50
PTEIICYRTWRNPNNPMRWNLIRVIILWTGMRPNKGNMIPESDFHI-WDWT
>SEQ4/1-50
PTEIICYRTWRAPNNPMRWNLIDVIILWTGQRSNKGNIIPESDFHI-WDWT
>SEQ5/1-50
PTEMICYRTWRAPNNPMRWNLIDVIILWTGQRPNKGNMIPASDFHI-WDWT
>SEQ6/1-50
PTEIICYRTNRAPNNPMRWNLIDVIILWTGQRPNKGNMIPESDFHR-WDWT
>SEQ7/1-50
PTEIICYRTWRAPNNPMRWNLIDVIILWHGQRPNKGNMIPESDFHI-WDWT
>SEQ8/1-50
PTEIICYFTWRAPNNPMRWNLIDVIILWTTQRPNKGNMIPESDFHI-WDAT
>SEQ9/1-50
PTEIVCYRTWRAPNNPMRWNIIDVIILWTGQRPNKGNMNPESDFHI-WDWV
>SEQ10/1-50
PTEIICYRTWRAPNNPMRWNLIDVIILWTGQRPNKGNMNPESDFHI-WDWT
>SEQ11/1-50
PTEAICYRTWRAPNNPMRWNLIDVIILWTQQRPNKGNMIPESDMHI-WDWT
>SEQ12/1-50
PTEIICYRTWRAPNNPMRWNLIDVIILWTGQRPNKGNMIPESDFHI-WDWT
>SEQ13/1-50
PTEIICYRTWRAPNNPMRWNLIDVIILWTGQRPNKGNMIPESDFHI-WDWT
>SEQ14/1-50
PTEIICYRTWRAPNQPMRWNLIDVIILWTGQRPNKGNMPPESDFHI-WDWT
>SEQ15/1-50
PTEIICYRTWRAPNNPMRWNLIDVIILWTGQRPNKGNMICESAFHI-WDWT
>SEQ16/1-50
PTEICCYRTWRAPNNPMRWNLIDVIILWTGQRPNKGNMIPESDFHI-WDWT
>SEQ17/1-50
PTEIICYRTWRAPNNPMTWNLIDVIILWTGQRPNKGNMIPESDFHI-WDWT
>SEQ18/1-50
PTEIICYRTIRAPNNPMRWNLIDVIILWTGQRPNKGWMIPESDFHI-WDWN
>SEQ19/1-50
PFEIICYRTWRAPNNPMRWNLIDVIILWTGQRPNCGNMIPESDFHI-WWWE
>SEQ20/1-50
TTEIICYRTWRAPNNPMRWNLIDVIILWTGQNPNKGNMIPESDFHI-WLWT


SequenceFeature type may not be null: 4 8 null desc
POSSIBLE IMPLEMENTATION ERROR: null sequence name passed to constructor.