Class jalview.datamodel.AlignmentAnnotationTests

all > jalview.datamodel > AlignmentAnnotationTests

tests

failures

ignored

0.034s

duration

100%

successful

Tests
Standard output
Standard error

Test	Duration	Result
testAdjustForAlignment	0.002s	passed
testCopyConstructor	0.001s	passed
testGetDefaultRnaHelixSymbol	0.001s	passed
testIsQuantitative	0.001s	passed
testLiftOver	0.011s	passed
testMakeVisibleAnnotation	0.001s	passed
testMakeVisibleAnnotation_ExplicitFullWidthAndHideCols	0.003s	passed
testMakeVisibleAnnotation_ExplicitFullWidthAndHideCols2	0.001s	passed
testMakeVisibleAnnotation_HiddenRegionAndTrimEndBeyondSize	0.001s	passed
testMakeVisibleAnnotation_HiddenRegionAndTrimStartBeforeStart	0.001s	passed
testMakeVisibleAnnotation_HiddenRegionBeforeStart	0.001s	passed
testMakeVisibleAnnotation_HiddenRegionBeyondSize	0.001s	passed
testMakeVisibleAnnotation_HideCols	0.001s	passed
testMakeVisibleAnnotation_HideColsWithEmptyAnnots	0s	passed
testMakeVisibleAnnotation_HideColsWithNullAnnots	0s	passed
testMakeVisibleAnnotation_NoColsHidden	0s	passed
testMakeVisibleAnnotation_NullAnnotationsAndNoColsHidden	0.002s	passed
testMakeVisibleAnnotation_NullAnnotationsAndTrim	0s	passed
testMakeVisibleAnnotation_Truncate	0s	passed
testMakeVisibleAnnotation_TruncateAndHideColumns	0.001s	passed
testMakeVisibleAnnotation_TruncateEndBeyondSize	0.001s	passed
testMakeVisibleAnnotation_TruncateNegativeStart	0.001s	passed
testMakeVisibleAnnotation_TruncateNegativeStartAndEnd	0.002s	passed
testMakeVisibleAnnotation_TruncateStartAndEndBeyondSize	0.001s	passed

# STOCKHOLM 1.0
fromLong/10-18         QQQCDEWGH
fromLong/12-16         QCDEW
toShort/20-24          RCDEW
toShort/20-24          RCDEW
//

# STOCKHOLM 1.0
fromLong/12-16         QCDEW
toShort/20-24          RCDEW
//

Pos 0 mismatch

Warning : Unknown Stockholm annotation type: For fromLong
Warning : Unknown Stockholm annotation type: For toShort
Warning : Unknown Stockholm annotation type: For toShort
Warning : Unknown Stockholm annotation type: For fromLong