Class jalview.datamodel.AlignmentAnnotationTests

24

tests

0

failures

0

ignored

0.034s

duration

100%

successful

Test Duration Result
testAdjustForAlignment 0.002s passed
testCopyConstructor 0.001s passed
testGetDefaultRnaHelixSymbol 0.001s passed
testIsQuantitative 0.001s passed
testLiftOver 0.011s passed
testMakeVisibleAnnotation 0.001s passed
testMakeVisibleAnnotation_ExplicitFullWidthAndHideCols 0.003s passed
testMakeVisibleAnnotation_ExplicitFullWidthAndHideCols2 0.001s passed
testMakeVisibleAnnotation_HiddenRegionAndTrimEndBeyondSize 0.001s passed
testMakeVisibleAnnotation_HiddenRegionAndTrimStartBeforeStart 0.001s passed
testMakeVisibleAnnotation_HiddenRegionBeforeStart 0.001s passed
testMakeVisibleAnnotation_HiddenRegionBeyondSize 0.001s passed
testMakeVisibleAnnotation_HideCols 0.001s passed
testMakeVisibleAnnotation_HideColsWithEmptyAnnots 0s passed
testMakeVisibleAnnotation_HideColsWithNullAnnots 0s passed
testMakeVisibleAnnotation_NoColsHidden 0s passed
testMakeVisibleAnnotation_NullAnnotationsAndNoColsHidden 0.002s passed
testMakeVisibleAnnotation_NullAnnotationsAndTrim 0s passed
testMakeVisibleAnnotation_Truncate 0s passed
testMakeVisibleAnnotation_TruncateAndHideColumns 0.001s passed
testMakeVisibleAnnotation_TruncateEndBeyondSize 0.001s passed
testMakeVisibleAnnotation_TruncateNegativeStart 0.001s passed
testMakeVisibleAnnotation_TruncateNegativeStartAndEnd 0.002s passed
testMakeVisibleAnnotation_TruncateStartAndEndBeyondSize 0.001s passed
# STOCKHOLM 1.0
fromLong/10-18         QQQCDEWGH
fromLong/12-16         QCDEW
toShort/20-24          RCDEW
toShort/20-24          RCDEW
//

# STOCKHOLM 1.0
fromLong/12-16         QCDEW
toShort/20-24          RCDEW
//

Pos 0 mismatch
Warning : Unknown Stockholm annotation type: For fromLong
Warning : Unknown Stockholm annotation type: For toShort
Warning : Unknown Stockholm annotation type: For toShort
Warning : Unknown Stockholm annotation type: For fromLong