Class jalview.datamodel.AlignmentAnnotationTests
Test |
Duration |
Result |
testAdjustForAlignment |
0.002s |
passed |
testCopyConstructor |
0.001s |
passed |
testGetDefaultRnaHelixSymbol |
0.001s |
passed |
testIsQuantitative |
0.001s |
passed |
testLiftOver |
0.011s |
passed |
testMakeVisibleAnnotation |
0.001s |
passed |
testMakeVisibleAnnotation_ExplicitFullWidthAndHideCols |
0.003s |
passed |
testMakeVisibleAnnotation_ExplicitFullWidthAndHideCols2 |
0.001s |
passed |
testMakeVisibleAnnotation_HiddenRegionAndTrimEndBeyondSize |
0.001s |
passed |
testMakeVisibleAnnotation_HiddenRegionAndTrimStartBeforeStart |
0.001s |
passed |
testMakeVisibleAnnotation_HiddenRegionBeforeStart |
0.001s |
passed |
testMakeVisibleAnnotation_HiddenRegionBeyondSize |
0.001s |
passed |
testMakeVisibleAnnotation_HideCols |
0.001s |
passed |
testMakeVisibleAnnotation_HideColsWithEmptyAnnots |
0s |
passed |
testMakeVisibleAnnotation_HideColsWithNullAnnots |
0s |
passed |
testMakeVisibleAnnotation_NoColsHidden |
0s |
passed |
testMakeVisibleAnnotation_NullAnnotationsAndNoColsHidden |
0.002s |
passed |
testMakeVisibleAnnotation_NullAnnotationsAndTrim |
0s |
passed |
testMakeVisibleAnnotation_Truncate |
0s |
passed |
testMakeVisibleAnnotation_TruncateAndHideColumns |
0.001s |
passed |
testMakeVisibleAnnotation_TruncateEndBeyondSize |
0.001s |
passed |
testMakeVisibleAnnotation_TruncateNegativeStart |
0.001s |
passed |
testMakeVisibleAnnotation_TruncateNegativeStartAndEnd |
0.002s |
passed |
testMakeVisibleAnnotation_TruncateStartAndEndBeyondSize |
0.001s |
passed |
# STOCKHOLM 1.0
fromLong/10-18 QQQCDEWGH
fromLong/12-16 QCDEW
toShort/20-24 RCDEW
toShort/20-24 RCDEW
//
# STOCKHOLM 1.0
fromLong/12-16 QCDEW
toShort/20-24 RCDEW
//
Pos 0 mismatch
Warning : Unknown Stockholm annotation type: For fromLong
Warning : Unknown Stockholm annotation type: For toShort
Warning : Unknown Stockholm annotation type: For toShort
Warning : Unknown Stockholm annotation type: For fromLong