Class jalview.analysis.DnaTest
|
100%
successful |
| Test | Duration | Result |
|---|---|---|
| testCompareCodonPos | 0.006s | passed |
| testCompareCodonPos_isSymmetric | 0.003s | passed |
| testCompareCodonPos_oneOnly | 0s | passed |
| testConvertCodon | 0s | passed |
| testGetComplement | 0.001s | passed |
| testReverseCdna | 0.004s | passed |
| testReverseSequence | 0.001s | passed |
| testTranslateCdna_hiddenColumns | 0.002s | passed |
| testTranslateCdna_sequenceOrderIndependent | 0.004s | passed |
| testTranslateCdna_simple | 0.002s | passed |
| testTranslateCdna_withUntranslatableCodons | 0.011s | passed |
| testTranslateCdna_withUntranslatableCodonsAndHiddenColumns | 0.034s | passed |
K: AAA [0, 1, 2] G: GGG [0, 1, 2] K: GGG [0, 1, 2] G: AAA [0, 1, 2] K: AA-A [0, 1, 3] G: GGG [0, 1, 2] K: AAA [0, 1, 2] G: GG-G [0, 1, 3] K: A-AA [0, 2, 3] G: GG-G [0, 1, 3] K: A-A-A [0, 2, 4] G: GG-G [0, 1, 3] K: A-AA [0, 2, 3] G: GG--G [0, 1, 4] K: AA-A [0, 1, 3] G: G-GG [0, 2, 3] K: AA--A [0, 1, 4] G: G-GG [0, 2, 3] K: AAA [0, 1, 2] G: G-GG [0, 2, 3] K: -AAA [1, 2, 3] G: G-GG [0, 2, 3] K: -AA-A [1, 2, 4] G: G-GG [0, 2, 3] K: -AAA [1, 2, 3] G: G-G-G [0, 2, 4] K: -A-AA [1, 3, 4] G: G-G-G [0, 2, 4] K: -A-A-A [1, 3, 5] G: G-G-G [0, 2, 4] K: -A-AA [1, 3, 4] G: G-G--G [0, 2, 5] K: -AA-A [1, 2, 4] G: G--GG [0, 3, 4] K: -AA--A [1, 2, 5] G: G--GG [0, 3, 4] K: -AAA [1, 2, 3] G: G--GG [0, 3, 4] K: A-AA [0, 2, 3] G: -GGG [1, 2, 3] K: A-A-A [0, 2, 4] G: -GGG [1, 2, 3] K: A-AA [0, 2, 3] G: -GG-G [1, 2, 4] K: A--AA [0, 3, 4] G: -GG-G [1, 2, 4] K: A--AA [0, 3, 4] G: -GGG [1, 2, 3] K: A--AA [0, 3, 4] G: -GG--G [1, 2, 5] K: AA-A [0, 1, 3] G: -GGG [1, 2, 3] K: AA--A [0, 1, 4] G: -GGG [1, 2, 3] K: AAA [0, 1, 2] G: -GGG [1, 2, 3] K: AAA [0, 1, 2] G: GGG [0, 1, 2] K: GGG [0, 1, 2] G: AAA [0, 1, 2] K: AA-A [0, 1, 3] G: GGG [0, 1, 2] K: GGG [0, 1, 2] G: AA-A [0, 1, 3] K: AAA [0, 1, 2] G: GG-G [0, 1, 3] K: GG-G [0, 1, 3] G: AAA [0, 1, 2] K: A-AA [0, 2, 3] G: GG-G [0, 1, 3] K: GG-G [0, 1, 3] G: A-AA [0, 2, 3] K: A-A-A [0, 2, 4] G: GG-G [0, 1, 3] K: GG-G [0, 1, 3] G: A-A-A [0, 2, 4] K: A-AA [0, 2, 3] G: GG--G [0, 1, 4] K: GG--G [0, 1, 4] G: A-AA [0, 2, 3] K: AA-A [0, 1, 3] G: G-GG [0, 2, 3] K: G-GG [0, 2, 3] G: AA-A [0, 1, 3] K: AA--A [0, 1, 4] G: G-GG [0, 2, 3] K: G-GG [0, 2, 3] G: AA--A [0, 1, 4] K: AAA [0, 1, 2] G: G-GG [0, 2, 3] K: G-GG [0, 2, 3] G: AAA [0, 1, 2] K: -AAA [1, 2, 3] G: G-GG [0, 2, 3] K: G-GG [0, 2, 3] G: -AAA [1, 2, 3] K: -AA-A [1, 2, 4] G: G-GG [0, 2, 3] K: G-GG [0, 2, 3] G: -AA-A [1, 2, 4] K: -AAA [1, 2, 3] G: G-G-G [0, 2, 4] K: G-G-G [0, 2, 4] G: -AAA [1, 2, 3] K: -A-AA [1, 3, 4] G: G-G-G [0, 2, 4] K: G-G-G [0, 2, 4] G: -A-AA [1, 3, 4] K: -A-A-A [1, 3, 5] G: G-G-G [0, 2, 4] K: G-G-G [0, 2, 4] G: -A-A-A [1, 3, 5] K: -A-AA [1, 3, 4] G: G-G--G [0, 2, 5] K: G-G--G [0, 2, 5] G: -A-AA [1, 3, 4] K: -AA-A [1, 2, 4] G: G--GG [0, 3, 4] K: G--GG [0, 3, 4] G: -AA-A [1, 2, 4] K: -AA--A [1, 2, 5] G: G--GG [0, 3, 4] K: G--GG [0, 3, 4] G: -AA--A [1, 2, 5] K: -AAA [1, 2, 3] G: G--GG [0, 3, 4] K: G--GG [0, 3, 4] G: -AAA [1, 2, 3] K: A-AA [0, 2, 3] G: -GGG [1, 2, 3] K: -GGG [1, 2, 3] G: A-AA [0, 2, 3] K: A-A-A [0, 2, 4] G: -GGG [1, 2, 3] K: -GGG [1, 2, 3] G: A-A-A [0, 2, 4] K: A-AA [0, 2, 3] G: -GG-G [1, 2, 4] K: -GG-G [1, 2, 4] G: A-AA [0, 2, 3] K: A--AA [0, 3, 4] G: -GG-G [1, 2, 4] K: -GG-G [1, 2, 4] G: A--AA [0, 3, 4] K: A--AA [0, 3, 4] G: -GGG [1, 2, 3] K: -GGG [1, 2, 3] G: A--AA [0, 3, 4] K: A--AA [0, 3, 4] G: -GG--G [1, 2, 5] K: -GG--G [1, 2, 5] G: A--AA [0, 3, 4] K: AA-A [0, 1, 3] G: -GGG [1, 2, 3] K: -GGG [1, 2, 3] G: AA-A [0, 1, 3] K: AA--A [0, 1, 4] G: -GGG [1, 2, 3] K: -GGG [1, 2, 3] G: AA--A [0, 1, 4] K: AAA [0, 1, 2] G: -GGG [1, 2, 3] K: -GGG [1, 2, 3] G: AAA [0, 1, 2] K: -AA--A [1, 2, 5] G: G--GG [0, 3, 4] >SEQ1/1-12 CAGTTCGTAGAA >SEQ2/1-12 TAGTTCGTAGAA >SEQ3/1-12 CAGTTCGTAGAA >SEQ4/1-12 CAGTTCGTAGAA >SEQ5/1-12 CAGTTCGTAGAA >SEQ6/1-12 CAGTTCGTAGAA >SEQ7/1-12 CAGTTCGTAGAA >SEQ8/1-12 CAGTTCGTAGAA Original >SEQ1/1-4 QFVE >SEQ2/1-4 *FVE >SEQ3/1-4 QFVE >SEQ4/1-4 QFVE >SEQ5/1-4 QFVE >SEQ6/1-4 QFVE >SEQ7/1-4 QFVE >SEQ8/1-4 QFVE Sorted >SEQ7/1-4 QFVE >SEQ8/1-4 QFVE >SEQ4/1-4 QFVE >SEQ5/1-4 QFVE >SEQ3/1-4 QFVE >SEQ1/1-4 QFVE >SEQ2/1-4 *FVE >SEQ6/1-4 QFVE
trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon. trimming contigs for incomplete terminal codon.