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Coverage Report

Test testFindColumnsWithFeature

Test
testFindColumnsWithFeature 1PASS 28 Nov 18:08:25 0.019
 
testFindColumnsWithFeature
jalview.ws.WSClient   jalview.ws.WSClient 1.0100%
jalview.datamodel.ResidueCount.SymbolCounts   jalview.datamodel.ResidueCount.SymbolCounts 1.0100%
jalview.jbgui.GAlignmentPanel   jalview.jbgui.GAlignmentPanel 0.9494%
jalview.analysis.Conservation   jalview.analysis.Conservation 0.896551789.7%
jalview.util.LinkedIdentityHashSet   jalview.util.LinkedIdentityHashSet 0.7727272577.3%
jalview.datamodel.Profiles   jalview.datamodel.Profiles 0.7333333573.3%
jalview.gui.FeatureRenderer   jalview.gui.FeatureRenderer 0.7142857371.4%
jalview.util.LinkedIdentityHashSet.IdentityWrapper   jalview.util.LinkedIdentityHashSet.IdentityWrapper 0.7142857371.4%
jalview.workers.ConsensusThread   jalview.workers.ConsensusThread 0.696969769.7%
jalview.ws.SequenceFetcher   jalview.ws.SequenceFetcher 0.678571467.9%
jalview.workers.ConservationThread   jalview.workers.ConservationThread 0.6206896362.1%
jalview.jbgui.GAlignFrame   jalview.jbgui.GAlignFrame 0.581220758.1%
jalview.viewmodel.ViewportProperties   jalview.viewmodel.ViewportProperties 0.550%
jalview.schemes.TaylorColourScheme   jalview.schemes.TaylorColourScheme 0.550%
jalview.schemes.FlowerColourScheme   jalview.schemes.FlowerColourScheme 0.550%
jalview.schemes.ZappoColourScheme   jalview.schemes.ZappoColourScheme 0.550%
jalview.schemes.NucleotideAmbiguityColourScheme   jalview.schemes.NucleotideAmbiguityColourScheme 0.550%
jalview.schemes.PurinePyrimidineColourScheme   jalview.schemes.PurinePyrimidineColourScheme 0.550%
jalview.schemes.NucleotideColourScheme   jalview.schemes.NucleotideColourScheme 0.550%
jalview.schemes.BlossomColourScheme   jalview.schemes.BlossomColourScheme 0.550%
jalview.schemes.SunsetColourScheme   jalview.schemes.SunsetColourScheme 0.550%
jalview.schemes.OceanColourScheme   jalview.schemes.OceanColourScheme 0.550%
jalview.datamodel.ResidueCount   jalview.datamodel.ResidueCount 0.4763636347.6%
jalview.gui.ColourMenuHelper   jalview.gui.ColourMenuHelper 0.4322033843.2%
jalview.datamodel.HiddenCursorPosition   jalview.datamodel.HiddenCursorPosition 0.4285714342.9%
jalview.util.ShortcutKeyMaskExWrapper11   jalview.util.ShortcutKeyMaskExWrapper11 0.4166666641.7%
jalview.ws.dbsources.EmblSource   jalview.ws.dbsources.EmblSource 0.440%
jalview.util.SparseCount   jalview.util.SparseCount 0.440%
jalview.schemes.HydrophobicColourScheme   jalview.schemes.HydrophobicColourScheme 0.440%
jalview.schemes.HelixColourScheme   jalview.schemes.HelixColourScheme 0.440%
jalview.schemes.TurnColourScheme   jalview.schemes.TurnColourScheme 0.440%
jalview.schemes.StrandColourScheme   jalview.schemes.StrandColourScheme 0.440%
jalview.schemes.BuriedColourScheme   jalview.schemes.BuriedColourScheme 0.440%
jalview.datamodel.features.FeatureStore   jalview.datamodel.features.FeatureStore 0.389728139%
jalview.workers.AlignCalcManager   jalview.workers.AlignCalcManager 0.380952438.1%
jalview.datamodel.Profile   jalview.datamodel.Profile 0.37537.5%
jalview.util.MessageManager   jalview.util.MessageManager 0.3571428735.7%
jalview.schemes.ResidueColourScheme   jalview.schemes.ResidueColourScheme 0.3571428735.7%
jalview.ws.jws2.MsaWSClient   jalview.ws.jws2.MsaWSClient 0.348993334.9%
jalview.datamodel.features.SequenceFeatures   jalview.datamodel.features.SequenceFeatures 0.305732530.6%
jalview.util.Comparison   jalview.util.Comparison 0.295275629.5%
jalview.viewmodel.styles.ViewStyle   jalview.viewmodel.styles.ViewStyle 0.2929687529.3%
jalview.ws.dbsources.EmblCdsSource   jalview.ws.dbsources.EmblCdsSource 0.285714328.6%
jalview.schemes.JalviewColourScheme   jalview.schemes.JalviewColourScheme 0.285714328.6%
jalview.ws.jws2.JabaPreset   jalview.ws.jws2.JabaPreset 0.2727272827.3%
jalview.gui.AlignViewport   jalview.gui.AlignViewport 0.2694063826.9%
jalview.workers.AlignCalcWorker   jalview.workers.AlignCalcWorker 0.2619047826.2%
jalview.ext.android.ContainerHelpers   jalview.ext.android.ContainerHelpers 0.2592592525.9%
jalview.ws.jws2.jabaws2.Jws2Instance   jalview.ws.jws2.jabaws2.Jws2Instance 0.2528735725.3%
jalview.gui.JalviewChangeSupport   jalview.gui.JalviewChangeSupport 0.2525%
jalview.ext.android.SparseShortArray   jalview.ext.android.SparseShortArray 0.2485875624.9%
jalview.datamodel.SequenceCursor   jalview.datamodel.SequenceCursor 0.2333333323.3%
jalview.gui.JvSwingUtils   jalview.gui.JvSwingUtils 0.2312925223.1%
jalview.datamodel.Sequence   jalview.datamodel.Sequence 0.2309688623.1%
jalview.gui.AlignmentPanel   jalview.gui.AlignmentPanel 0.2249705522.5%
jalview.log.JalviewAppender   jalview.log.JalviewAppender 0.2222222222.2%
jalview.util.ColorUtils   jalview.util.ColorUtils 0.2096774121%
jalview.analysis.AAFrequency   jalview.analysis.AAFrequency 0.2088607520.9%
jalview.viewmodel.seqfeatures.FeatureRendererModel   jalview.viewmodel.seqfeatures.FeatureRendererModel 0.2065727720.7%
jalview.io.FileFormats   jalview.io.FileFormats 0.220%
jalview.ws.jws2.Jws2Discoverer   jalview.ws.jws2.Jws2Discoverer 0.198019819.8%
jalview.schemes.FeatureColour   jalview.schemes.FeatureColour 0.1873684218.7%
jalview.viewmodel.AlignmentViewport   jalview.viewmodel.AlignmentViewport 0.1843702618.4%
jalview.schemes.IdColourScheme   jalview.schemes.IdColourScheme 0.1739130517.4%
jalview.controller.AlignViewController   jalview.controller.AlignViewController 0.1706484717.1%
jalview.analysis.AnnotationSorter   jalview.analysis.AnnotationSorter 0.1674876816.7%
jalview.util.Format   jalview.util.Format 0.1490683314.9%
jalview.schemes.TCoffeeColourScheme   jalview.schemes.TCoffeeColourScheme 0.1475409914.8%
jalview.gui.PaintRefresher   jalview.gui.PaintRefresher 0.1408450814.1%
jalview.ws.jws2.Jws2Client   jalview.ws.jws2.Jws2Client 0.1385542213.9%
jalview.viewmodel.ViewportRanges   jalview.viewmodel.ViewportRanges 0.1287128812.9%
jalview.viewmodel.seqfeatures.FeaturesDisplayed   jalview.viewmodel.seqfeatures.FeaturesDisplayed 0.12512.5%
jalview.datamodel.Alignment   jalview.datamodel.Alignment 0.11824953611.8%
jalview.schemes.Blosum62ColourScheme   jalview.schemes.Blosum62ColourScheme 0.1176470611.8%
jalview.analysis.scoremodels.ScoreModels   jalview.analysis.scoremodels.ScoreModels 0.11538461611.5%
jalview.datamodel.Annotation   jalview.datamodel.Annotation 0.11428571511.4%
jalview.util.ShortcutKeyMaskExWrapper   jalview.util.ShortcutKeyMaskExWrapper 0.1111111111.1%
jalview.schemes.ColourSchemeProperty   jalview.schemes.ColourSchemeProperty 0.1111111111.1%
jalview.util.QuickSort   jalview.util.QuickSort 0.10679611610.7%
jalview.gui.Desktop.MyDesktopPane   jalview.gui.Desktop.MyDesktopPane 0.09523819.5%
jalview.gui.AlignFrame   jalview.gui.AlignFrame 0.089931939%
jalview.ws.dbsources.Xfam   jalview.ws.dbsources.Xfam 0.086956528.7%
jalview.ext.ensembl.EnsemblSequenceFetcher   jalview.ext.ensembl.EnsemblSequenceFetcher 0.0833333368.3%
jalview.gui.Console   jalview.gui.Console 0.082568818.3%
jalview.schemes.RNAHelicesColour   jalview.schemes.RNAHelicesColour 0.082191788.2%
jalview.gui.ProgressBar   jalview.gui.ProgressBar 0.081300818.1%
jalview.datamodel.SequenceFeature   jalview.datamodel.SequenceFeature 0.079136697.9%
jalview.datamodel.AlignmentAnnotation   jalview.datamodel.AlignmentAnnotation 0.0757.5%
jalview.schemes.ColourSchemes   jalview.schemes.ColourSchemes 0.070175447%
jalview.bin.Console   jalview.bin.Console 0.068965526.9%
jalview.gui.IdPanel   jalview.gui.IdPanel 0.067264576.7%
jalview.schemes.PIDColourScheme   jalview.schemes.PIDColourScheme 0.066666676.7%
jalview.log.JLogger   jalview.log.JLogger 0.065934076.6%
jalview.gui.IdwidthAdjuster   jalview.gui.IdwidthAdjuster 0.0657894766.6%
jalview.renderer.ResidueShader   jalview.renderer.ResidueShader 0.064285726.4%
jalview.analysis.CrossRef   jalview.analysis.CrossRef 0.063524596.4%
jalview.io.FileFormat   jalview.io.FileFormat 0.0620155046.2%
jalview.analysis.scoremodels.ScoreMatrix   jalview.analysis.scoremodels.ScoreMatrix 0.0617283966.2%
jalview.gui.ViewSelectionMenu   jalview.gui.ViewSelectionMenu 0.059405945.9%
jalview.ws.seqfetcher.ASequenceFetcher   jalview.ws.seqfetcher.ASequenceFetcher 0.0577777775.8%
jalview.ws.seqfetcher.DbSourceProxyImpl   jalview.ws.seqfetcher.DbSourceProxyImpl 0.0540540555.4%
jalview.analysis.GeneticCodes   jalview.analysis.GeneticCodes 0.0496894425%
jalview.ws.uimodel.AlignAnalysisUIText   jalview.ws.uimodel.AlignAnalysisUIText 0.0487804864.9%
jalview.util.Platform   jalview.util.Platform 0.0471698124.7%
jalview.util.DBRefUtils   jalview.util.DBRefUtils 0.045317224.5%
jalview.gui.AnnotationPanel   jalview.gui.AnnotationPanel 0.044117654.4%
jalview.ws.dbsources.Pdb   jalview.ws.dbsources.Pdb 0.042553194.3%
jalview.ws.jws2.JabaParamStore   jalview.ws.jws2.JabaParamStore 0.0416666684.2%
jalview.datamodel.SequenceGroup   jalview.datamodel.SequenceGroup 0.0393343423.9%
jalview.bin.Cache   jalview.bin.Cache 0.0385674953.9%
jalview.datamodel.ColumnSelection.IntList   jalview.datamodel.ColumnSelection.IntList 0.0373831763.7%
jalview.structure.StructureSelectionManager   jalview.structure.StructureSelectionManager 0.0373333323.7%
jalview.ws.jws2.SequenceAnnotationWSClient   jalview.ws.jws2.SequenceAnnotationWSClient 0.0322580643.2%
jalview.gui.IdCanvas   jalview.gui.IdCanvas 0.0245614032.5%
jalview.renderer.ResidueColourFinder   jalview.renderer.ResidueColourFinder 0.0238095242.4%
jalview.gui.ScalePanel   jalview.gui.ScalePanel 0.02343752.3%
jalview.schemes.ClustalxColourScheme   jalview.schemes.ClustalxColourScheme 0.0169491531.7%
jalview.datamodel.HiddenColumnsCursor   jalview.datamodel.HiddenColumnsCursor 0.0156251.6%
jalview.ws.dbsources.Uniprot   jalview.ws.dbsources.Uniprot 0.0155642021.6%
jalview.gui.SequenceRenderer   jalview.gui.SequenceRenderer 0.0144230771.4%
jalview.analysis.AlignSeq   jalview.analysis.AlignSeq 0.0128205131.3%
jalview.gui.SeqPanel   jalview.gui.SeqPanel 0.0125412541.3%
jalview.io.SequenceAnnotationReport   jalview.io.SequenceAnnotationReport 0.0122699381.2%
jalview.gui.AnnotationLabels   jalview.gui.AnnotationLabels 0.01150747951.2%
jalview.gui.SeqCanvas   jalview.gui.SeqCanvas 0.010020041%
jalview.datamodel.HiddenSequences   jalview.datamodel.HiddenSequences 0.009132420.9%
jalview.ext.ensembl.EnsemblGene   jalview.ext.ensembl.EnsemblGene 0.0081632650.8%
jalview.renderer.seqfeatures.FeatureRenderer   jalview.renderer.seqfeatures.FeatureRenderer 0.007547170.8%
jalview.datamodel.HiddenColumns   jalview.datamodel.HiddenColumns 0.0070754720.7%
jalview.gui.Desktop   jalview.gui.Desktop 0.0056947610.6%
jalview.bin.Jalview   jalview.bin.Jalview 0.0045703840.5%
jalview.renderer.AnnotationRenderer   jalview.renderer.AnnotationRenderer 0.00362318850.4%
jalview.datamodel.ColumnSelection   jalview.datamodel.ColumnSelection 0.00343642620.3%