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Test testCopyViewSettings

Test
testCopyViewSettings 1PASS 18 Nov 09:59:26 3.905
 
testCopyViewSettings
com.stevesoft.pat.patInf   com.stevesoft.pat.patInf 1.0100%
jalview.io.DataSourceType   jalview.io.DataSourceType 1.0100%
jalview.xml.binding.jalview.JalviewModel.JSeq.Pdbids   jalview.xml.binding.jalview.JalviewModel.JSeq.Pdbids 1.0100%
jalview.renderer.ScaleRenderer.ScaleMark   jalview.renderer.ScaleRenderer.ScaleMark 1.0100%
jalview.ws.WSClient   jalview.ws.WSClient 1.0100%
jalview.project.Jalview2XML.JvAnnotRow   jalview.project.Jalview2XML.JvAnnotRow 1.0100%
jalview.datamodel.HiddenCursorPosition   jalview.datamodel.HiddenCursorPosition 1.0100%
jalview.datamodel.SecondaryStructureCount.SymbolCounts   jalview.datamodel.SecondaryStructureCount.SymbolCounts 1.0100%
jalview.datamodel.ResidueCount.SymbolCounts   jalview.datamodel.ResidueCount.SymbolCounts 1.0100%
jalview.schemes.ZappoColourScheme   jalview.schemes.ZappoColourScheme 1.0100%
jalview.jbgui.GAlignmentPanel   jalview.jbgui.GAlignmentPanel 0.9494%
jalview.viewmodel.styles.ViewStyle   jalview.viewmodel.styles.ViewStyle 0.8985507589.9%
jalview.datamodel.HiddenColumnsCursor   jalview.datamodel.HiddenColumnsCursor 0.89062589.1%
jalview.analysis.Conservation   jalview.analysis.Conservation 0.8854415488.5%
jalview.datamodel.Profiles   jalview.datamodel.Profiles 0.866666786.7%
jalview.util.QuickSort.IntComparator   jalview.util.QuickSort.IntComparator 0.8571428785.7%
com.stevesoft.pat.OrMark   com.stevesoft.pat.OrMark 0.8585%
com.stevesoft.pat.Rthings   com.stevesoft.pat.Rthings 0.8461538684.6%
mc_view.Residue   mc_view.Residue 0.8461538684.6%
jalview.datamodel.VisibleContigsIterator   jalview.datamodel.VisibleContigsIterator 0.8085106680.9%
jalview.structure.PDBEntryUtils   jalview.structure.PDBEntryUtils 0.808219280.8%
com.stevesoft.pat.SubMark   com.stevesoft.pat.SubMark 0.880%
jalview.util.LinkedIdentityHashSet   jalview.util.LinkedIdentityHashSet 0.7727272577.3%
jalview.datamodel.StructureViewerModel   jalview.datamodel.StructureViewerModel 0.7676%
jalview.structures.models.SequenceStructureBindingModel   jalview.structures.models.SequenceStructureBindingModel 0.7575%
jalview.schemes.ResidueColourScheme   jalview.schemes.ResidueColourScheme 0.738095273.8%
jalview.datamodel.Profile   jalview.datamodel.Profile 0.7377049373.8%
jalview.xml.binding.jalview.SequenceSet   jalview.xml.binding.jalview.SequenceSet 0.736842173.7%
jalview.workers.SecondaryStructureConsensusThread   jalview.workers.SecondaryStructureConsensusThread 0.735294173.5%
jalview.workers.ConsensusThread   jalview.workers.ConsensusThread 0.717171771.7%
jalview.gui.FeatureRenderer   jalview.gui.FeatureRenderer 0.7142857371.4%
jalview.util.LinkedIdentityHashSet.IdentityWrapper   jalview.util.LinkedIdentityHashSet.IdentityWrapper 0.7142857371.4%
jalview.jbgui.GStructureViewer   jalview.jbgui.GStructureViewer 0.703296770.3%
com.stevesoft.pat.Bracket   com.stevesoft.pat.Bracket 0.770%
jalview.datamodel.StartRegionIterator   jalview.datamodel.StartRegionIterator 0.694444469.4%
com.stevesoft.pat.oneChar   com.stevesoft.pat.oneChar 0.685714368.6%
jalview.workers.AlignCalcManager   jalview.workers.AlignCalcManager 0.678571467.9%
jalview.ws.SequenceFetcher   jalview.ws.SequenceFetcher 0.678571467.9%
jalview.xml.binding.jalview.JalviewModel.FeatureSettings   jalview.xml.binding.jalview.JalviewModel.FeatureSettings 0.666666766.7%
jalview.xml.binding.jalview.JalviewModel.JSeq   jalview.xml.binding.jalview.JalviewModel.JSeq 0.666666766.7%
jalview.gui.IdCanvas   jalview.gui.IdCanvas 0.656140365.6%
jalview.workers.ConservationThread   jalview.workers.ConservationThread 0.6565%
jalview.io.PDBFeatureSettings   jalview.io.PDBFeatureSettings 0.6428571364.3%
com.stevesoft.pat.Range   com.stevesoft.pat.Range 0.636363663.6%
com.stevesoft.pat.wrap.StringWrap   com.stevesoft.pat.wrap.StringWrap 0.62562.5%
jalview.datamodel.StructureViewerModel.StructureData   jalview.datamodel.StructureViewerModel.StructureData 0.62562.5%
com.stevesoft.pat.StrPos   com.stevesoft.pat.StrPos 0.6162790761.6%
jalview.xml.binding.jalview.JalviewModel   jalview.xml.binding.jalview.JalviewModel 0.6153846461.5%
jalview.xml.binding.jalview.Pdbentry   jalview.xml.binding.jalview.Pdbentry 0.611111161.1%
jalview.analysis.SequenceIdMatcher.SeqIdName   jalview.analysis.SequenceIdMatcher.SeqIdName 0.605263260.5%
jalview.util.ParseHtmlBodyAndLinks   jalview.util.ParseHtmlBodyAndLinks 0.594202959.4%
jalview.gui.TreePanel.TreeLoader   jalview.gui.TreePanel.TreeLoader 0.589743659%
jalview.xml.binding.jalview.Feature   jalview.xml.binding.jalview.Feature 0.588235358.8%
jalview.jbgui.GTreePanel   jalview.jbgui.GTreePanel 0.587301658.7%
jalview.jbgui.GAlignFrame   jalview.jbgui.GAlignFrame 0.580496858%
jalview.schemes.FeatureSettingsAdapter   jalview.schemes.FeatureSettingsAdapter 0.571428657.1%
jalview.util.CaseInsensitiveString   jalview.util.CaseInsensitiveString 0.565217456.5%
jalview.renderer.ScaleRenderer   jalview.renderer.ScaleRenderer 0.5656%
jalview.gui.PaintRefresher   jalview.gui.PaintRefresher 0.5211267552.1%
com.stevesoft.pat.Boundary   com.stevesoft.pat.Boundary 0.518518551.9%
jalview.analysis.AAFrequency   jalview.analysis.AAFrequency 0.5184426351.8%
jalview.ext.jmol.JmolParser   jalview.ext.jmol.JmolParser 0.509333350.9%
jalview.datamodel.BinaryNode   jalview.datamodel.BinaryNode 0.5087719650.9%
com.stevesoft.pat.Pattern   com.stevesoft.pat.Pattern 0.506944450.7%
mc_view.PDBChain   mc_view.PDBChain 0.505208350.5%
jalview.gui.JalviewChangeSupport   jalview.gui.JalviewChangeSupport 0.550%
com.stevesoft.pat.FastChar   com.stevesoft.pat.FastChar 0.550%
com.stevesoft.pat.FastMulti   com.stevesoft.pat.FastMulti 0.550%
jalview.viewmodel.ViewportProperties   jalview.viewmodel.ViewportProperties 0.550%
jalview.xml.binding.jalview.Feature.OtherData   jalview.xml.binding.jalview.Feature.OtherData 0.550%
jalview.xml.binding.jalview.AnnotationElement   jalview.xml.binding.jalview.AnnotationElement 0.550%
jalview.xml.binding.jalview.SequenceType   jalview.xml.binding.jalview.SequenceType 0.550%
jalview.xml.binding.jalview.JalviewModel.FeatureSettings.Group   jalview.xml.binding.jalview.JalviewModel.FeatureSettings.Group 0.550%
jalview.xml.binding.jalview.JalviewModel.Viewport.HiddenColumns   jalview.xml.binding.jalview.JalviewModel.Viewport.HiddenColumns 0.550%
jalview.xml.binding.jalview.Annotation   jalview.xml.binding.jalview.Annotation 0.550%
jalview.xml.binding.jalview.Sequence.DBRef   jalview.xml.binding.jalview.Sequence.DBRef 0.550%
mc_view.Bond   mc_view.Bond 0.550%
jalview.schemes.TaylorColourScheme   jalview.schemes.TaylorColourScheme 0.550%
jalview.schemes.FlowerColourScheme   jalview.schemes.FlowerColourScheme 0.550%
jalview.schemes.NucleotideAmbiguityColourScheme   jalview.schemes.NucleotideAmbiguityColourScheme 0.550%
jalview.schemes.PurinePyrimidineColourScheme   jalview.schemes.PurinePyrimidineColourScheme 0.550%
jalview.schemes.NucleotideColourScheme   jalview.schemes.NucleotideColourScheme 0.550%
jalview.schemes.BlossomColourScheme   jalview.schemes.BlossomColourScheme 0.550%
jalview.schemes.SunsetColourScheme   jalview.schemes.SunsetColourScheme 0.550%
jalview.schemes.OceanColourScheme   jalview.schemes.OceanColourScheme 0.550%
jalview.datamodel.PDBEntry   jalview.datamodel.PDBEntry 0.4913043449.1%
jalview.analysis.SequenceIdMatcher   jalview.analysis.SequenceIdMatcher 0.4912280749.1%
jalview.gui.SequenceRenderer   jalview.gui.SequenceRenderer 0.4855769348.6%
jalview.xml.binding.jalview.JalviewModel.Viewport   jalview.xml.binding.jalview.JalviewModel.Viewport 0.4836601348.4%
jalview.xml.binding.jalview.JalviewModel.JGroup   jalview.xml.binding.jalview.JalviewModel.JGroup 0.476562547.7%
jalview.xml.binding.jalview.JalviewModel.Tree   jalview.xml.binding.jalview.JalviewModel.Tree 0.4761904847.6%
jalview.util.MessageManager   jalview.util.MessageManager 0.4761904847.6%
jalview.gui.ColourMenuHelper   jalview.gui.ColourMenuHelper 0.466101746.6%
jalview.datamodel.features.SequenceFeatures   jalview.datamodel.features.SequenceFeatures 0.4649681446.5%
jalview.xml.binding.jalview.JalviewModel.JSeq.Pdbids.StructureState   jalview.xml.binding.jalview.JalviewModel.JSeq.Pdbids.StructureState 0.464285746.4%
jalview.renderer.AnnotationRenderer   jalview.renderer.AnnotationRenderer 0.4589285945.9%
jalview.renderer.ResidueColourFinder   jalview.renderer.ResidueColourFinder 0.4523809645.2%
jalview.datamodel.ResidueCount   jalview.datamodel.ResidueCount 0.4509090845.1%
com.stevesoft.pat.parsePerl   com.stevesoft.pat.parsePerl 0.448979644.9%
jalview.gui.SeqCanvas   jalview.gui.SeqCanvas 0.4438877744.4%
jalview.analysis.AlignSeq   jalview.analysis.AlignSeq 0.4410256444.1%
jalview.xml.binding.jalview.Sequence   jalview.xml.binding.jalview.Sequence 0.4285714342.9%
jalview.io.StructureFile   jalview.io.StructureFile 0.4186046441.9%
jalview.util.ShortcutKeyMaskExWrapper11   jalview.util.ShortcutKeyMaskExWrapper11 0.4166666641.7%
com.stevesoft.pat.Or   com.stevesoft.pat.Or 0.4102564241%
jalview.util.Comparison   jalview.util.Comparison 0.4094488340.9%
jalview.viewmodel.ViewportRanges   jalview.viewmodel.ViewportRanges 0.4092409340.9%
jalview.viewmodel.AlignmentViewport   jalview.viewmodel.AlignmentViewport 0.408192140.8%
jalview.gui.AlignViewport   jalview.gui.AlignViewport 0.405579440.6%
jalview.ws.dbsources.EmblSource   jalview.ws.dbsources.EmblSource 0.440%
jalview.schemes.HydrophobicColourScheme   jalview.schemes.HydrophobicColourScheme 0.440%
jalview.schemes.HelixColourScheme   jalview.schemes.HelixColourScheme 0.440%
jalview.schemes.TurnColourScheme   jalview.schemes.TurnColourScheme 0.440%
jalview.schemes.StrandColourScheme   jalview.schemes.StrandColourScheme 0.440%
jalview.schemes.BuriedColourScheme   jalview.schemes.BuriedColourScheme 0.440%
jalview.datamodel.Range   jalview.datamodel.Range 0.388888938.9%
jalview.datamodel.SequenceFeature   jalview.datamodel.SequenceFeature 0.3776978637.8%
jalview.analysis.TreeModel   jalview.analysis.TreeModel 0.3740157537.4%
jalview.gui.AlignmentPanel   jalview.gui.AlignmentPanel 0.3733804537.3%
jalview.util.Format   jalview.util.Format 0.3685300436.9%
jalview.io.NewickFile   jalview.io.NewickFile 0.3672055336.7%
jalview.datamodel.features.FeatureStore   jalview.datamodel.features.FeatureStore 0.3564954735.6%
jalview.renderer.ResidueShader   jalview.renderer.ResidueShader 0.3536585335.4%
jalview.datamodel.Sequence   jalview.datamodel.Sequence 0.3512110735.1%
jalview.ext.jmol.JalviewJmolBinding   jalview.ext.jmol.JalviewJmolBinding 0.3504950435%
jalview.datamodel.AlignmentAnnotation   jalview.datamodel.AlignmentAnnotation 0.3495024735%
jalview.ws.jws2.MsaWSClient   jalview.ws.jws2.MsaWSClient 0.348993334.9%
jalview.xml.binding.jalview.VAMSAS   jalview.xml.binding.jalview.VAMSAS 0.3333333433.3%
com.stevesoft.pat.Regex   com.stevesoft.pat.Regex 0.3263636232.6%
jalview.io.FileLoader   jalview.io.FileLoader 0.3177257531.8%
jalview.ws.rest.RestServiceDescription   jalview.ws.rest.RestServiceDescription 0.31531.5%
jalview.renderer.seqfeatures.FeatureRenderer   jalview.renderer.seqfeatures.FeatureRenderer 0.3132075431.3%
jalview.datamodel.PDBEntry.Type   jalview.datamodel.PDBEntry.Type 0.312531.2%
jalview.gui.IdwidthAdjuster   jalview.gui.IdwidthAdjuster 0.302631630.3%
jalview.datamodel.HiddenSequences   jalview.datamodel.HiddenSequences 0.2876712428.8%
jalview.ws.dbsources.EmblCdsSource   jalview.ws.dbsources.EmblCdsSource 0.285714328.6%
jalview.datamodel.Annotation   jalview.datamodel.Annotation 0.285714328.6%
jalview.schemes.JalviewColourScheme   jalview.schemes.JalviewColourScheme 0.285714328.6%
jalview.structure.StructureImportSettings   jalview.structure.StructureImportSettings 0.285714328.6%
jalview.datamodel.annotations.AnnotationRowBuilder   jalview.datamodel.annotations.AnnotationRowBuilder 0.282051328.2%
mc_view.Atom   mc_view.Atom 0.282051328.2%
jalview.viewmodel.seqfeatures.FeaturesDisplayed   jalview.viewmodel.seqfeatures.FeaturesDisplayed 0.2812528.1%
jalview.ws.jws2.JabaPreset   jalview.ws.jws2.JabaPreset 0.2727272827.3%
jalview.structure.StructureSelectionManager   jalview.structure.StructureSelectionManager 0.2727272827.3%
jalview.util.QuickSort   jalview.util.QuickSort 0.2653721626.5%
jalview.gui.ScalePanel   jalview.gui.ScalePanel 0.2621722826.2%
jalview.schemes.IdColourScheme   jalview.schemes.IdColourScheme 0.2608695626.1%
jalview.viewmodel.seqfeatures.FeatureRendererModel   jalview.viewmodel.seqfeatures.FeatureRendererModel 0.25665125.7%
jalview.project.Jalview2XML   jalview.project.Jalview2XML 0.2566124225.7%
com.stevesoft.pat.NullPattern   com.stevesoft.pat.NullPattern 0.2525%
com.stevesoft.pat.StringRule   com.stevesoft.pat.StringRule 0.2525%
jalview.renderer.AnnotationRendererFactory   jalview.renderer.AnnotationRendererFactory 0.2525%
jalview.schemes.ColourSchemeProperty   jalview.schemes.ColourSchemeProperty 0.2525%
jalview.schemes.ColourSchemes   jalview.schemes.ColourSchemes 0.2456140424.6%
jalview.ws.rest.params.Alignment   jalview.ws.rest.params.Alignment 0.2435897424.4%
jalview.io.FileParse   jalview.io.FileParse 0.2423398324.2%
jalview.io.FileFormats   jalview.io.FileFormats 0.2424%
jalview.datamodel.DBRefEntry   jalview.datamodel.DBRefEntry 0.2397260224%
com.stevesoft.pat.RegRes   com.stevesoft.pat.RegRes 0.2391304423.9%
jalview.gui.TreePanel   jalview.gui.TreePanel 0.2390670623.9%
jalview.datamodel.SequenceCursor   jalview.datamodel.SequenceCursor 0.2333333323.3%
jalview.gui.JvSwingUtils   jalview.gui.JvSwingUtils 0.2312925223.1%
jalview.datamodel.SequenceNode   jalview.datamodel.SequenceNode 0.2307692323.1%
jalview.gui.StructureViewerBase   jalview.gui.StructureViewerBase 0.2253313722.5%
jalview.datamodel.features.FeatureAttributes   jalview.datamodel.features.FeatureAttributes 0.224806222.5%
jalview.datamodel.SequenceGroup   jalview.datamodel.SequenceGroup 0.224719122.5%
jalview.gui.AnnotationLabels   jalview.gui.AnnotationLabels 0.2187845321.9%
jalview.structure.StructureMapping   jalview.structure.StructureMapping 0.2176165721.8%
jalview.gui.AppJmol   jalview.gui.AppJmol 0.2142857221.4%
jalview.datamodel.features.FeatureAttributes.AttributeData   jalview.datamodel.features.FeatureAttributes.AttributeData 0.2127659621.3%
jalview.ws.jws2.jabaws2.Jws2Instance   jalview.ws.jws2.jabaws2.Jws2Instance 0.2068965620.7%
jalview.ws.rest.InputType   jalview.ws.rest.InputType 0.2056074720.6%
jalview.datamodel.Alignment   jalview.datamodel.Alignment 0.2022263420.2%
com.stevesoft.pat.patInt   com.stevesoft.pat.patInt 0.220%
jalview.analysis.scoremodels.ScoreModels   jalview.analysis.scoremodels.ScoreModels 0.220%
jalview.structure.StructureCommand   jalview.structure.StructureCommand 0.220%
jalview.io.AlignFile   jalview.io.AlignFile 0.1986301419.9%
jalview.analysis.AnnotationSorter   jalview.analysis.AnnotationSorter 0.1970443319.7%
jalview.gui.AppJmolBinding   jalview.gui.AppJmolBinding 0.1962616919.6%
jalview.xml.binding.jalview.JalviewModel.FeatureSettings.Setting   jalview.xml.binding.jalview.JalviewModel.FeatureSettings.Setting 0.1935483819.4%
jalview.datamodel.SecondaryStructureCount   jalview.datamodel.SecondaryStructureCount 0.1914062519.1%
jalview.structures.models.AAStructureBindingModel   jalview.structures.models.AAStructureBindingModel 0.1816065218.2%
jalview.schemes.TCoffeeColourScheme   jalview.schemes.TCoffeeColourScheme 0.1803278618%
jalview.schemes.Blosum62ColourScheme   jalview.schemes.Blosum62ColourScheme 0.176470617.6%
jalview.util.StringUtils   jalview.util.StringUtils 0.1723076917.2%
jalview.io.IdentifyFile   jalview.io.IdentifyFile 0.1650793716.5%
jalview.gui.AnnotationPanel   jalview.gui.AnnotationPanel 0.1628151216.3%
jalview.ws.jws1.WS1Client   jalview.ws.jws1.WS1Client 0.1616%
jalview.gui.Desktop.MyDesktopManager   jalview.gui.Desktop.MyDesktopManager 0.1555555615.6%
jalview.viewmodel.seqfeatures.FeatureRendererSettings   jalview.viewmodel.seqfeatures.FeatureRendererSettings 0.1555555615.6%
jalview.gui.AlignFrame   jalview.gui.AlignFrame 0.1454162314.5%
jalview.workers.AlignCalcWorker   jalview.workers.AlignCalcWorker 0.1428571514.3%
jalview.gui.Desktop.MyDesktopPane   jalview.gui.Desktop.MyDesktopPane 0.1428571514.3%
jalview.ws.jws2.Jws2Discoverer   jalview.ws.jws2.Jws2Discoverer 0.1425742514.3%
com.stevesoft.pat.Branch   com.stevesoft.pat.Branch 0.140939614.1%
jalview.datamodel.HiddenColumns   jalview.datamodel.HiddenColumns 0.1367924513.7%
jalview.schemes.PIDColourScheme   jalview.schemes.PIDColourScheme 0.1333333413.3%
jalview.ws.rest.params.SeqGroupIndexVector   jalview.ws.rest.params.SeqGroupIndexVector 0.12408759412.4%
jalview.analysis.CrossRef   jalview.analysis.CrossRef 0.1229508212.3%
jalview.gui.Desktop   jalview.gui.Desktop 0.12015945512%
jalview.ws.rest.RestClient   jalview.ws.rest.RestClient 0.11538461611.5%
jalview.util.MapList   jalview.util.MapList 0.11526479611.5%
jalview.util.ShortcutKeyMaskExWrapper   jalview.util.ShortcutKeyMaskExWrapper 0.1111111111.1%
jalview.analysis.scoremodels.ScoreMatrix   jalview.analysis.scoremodels.ScoreMatrix 0.1111111111.1%
jalview.ws.sifts.SiftsSettings   jalview.ws.sifts.SiftsSettings 0.1111111111.1%
jalview.log.JLogger   jalview.log.JLogger 0.1098901111%
jalview.schemes.RNAHelicesColour   jalview.schemes.RNAHelicesColour 0.1095890411%
jalview.schemes.FeatureColour   jalview.schemes.FeatureColour 0.10736842510.7%
jalview.util.DBRefUtils   jalview.util.DBRefUtils 0.1057401810.6%
jalview.datamodel.Mapping   jalview.datamodel.Mapping 0.10389610410.4%
jalview.ws.rest.params.AnnotationFile   jalview.ws.rest.params.AnnotationFile 0.10256410410.3%
jalview.util.ColorUtils   jalview.util.ColorUtils 0.096774199.7%
jalview.bin.Console   jalview.bin.Console 0.0935960569.4%
com.stevesoft.pat.ReplaceRule   com.stevesoft.pat.ReplaceRule 0.08771938.8%
jalview.ws.dbsources.Xfam   jalview.ws.dbsources.Xfam 0.086956528.7%
jalview.ws.jws2.Jws2Client   jalview.ws.jws2.Jws2Client 0.0843373468.4%
jalview.ext.ensembl.EnsemblSequenceFetcher   jalview.ext.ensembl.EnsemblSequenceFetcher 0.0833333368.3%
jalview.gui.Console   jalview.gui.Console 0.082568818.3%
jalview.gui.ProgressBar   jalview.gui.ProgressBar 0.081300818.1%
jalview.ws.seqfetcher.DbSourceProxyImpl   jalview.ws.seqfetcher.DbSourceProxyImpl 0.081081088.1%
jalview.datamodel.ColumnSelection.IntList   jalview.datamodel.ColumnSelection.IntList 0.074766357.5%
jalview.ws.dbsources.Pdb   jalview.ws.dbsources.Pdb 0.072727277.3%
jalview.util.Platform   jalview.util.Platform 0.0707547147.1%
jalview.gui.IdPanel   jalview.gui.IdPanel 0.067264576.7%
com.stevesoft.pat.RegOpt   com.stevesoft.pat.RegOpt 0.06474826.5%
jalview.gui.TreeCanvas   jalview.gui.TreeCanvas 0.062721896.3%
jalview.io.FileFormat   jalview.io.FileFormat 0.0620155046.2%
ext.vamsas.ServiceHandle   ext.vamsas.ServiceHandle 0.061224496.1%
jalview.gui.ViewSelectionMenu   jalview.gui.ViewSelectionMenu 0.059405945.9%
jalview.ws.seqfetcher.ASequenceFetcher   jalview.ws.seqfetcher.ASequenceFetcher 0.0577777775.8%
jalview.datamodel.ContactMapHolder   jalview.datamodel.ContactMapHolder 0.0576923085.8%
jalview.ws.jws1.Discoverer   jalview.ws.jws1.Discoverer 0.0512820525.1%
jalview.analysis.GeneticCodes   jalview.analysis.GeneticCodes 0.0496894425%
jalview.bin.Cache   jalview.bin.Cache 0.0482093654.8%
jalview.io.AppletFormatAdapter   jalview.io.AppletFormatAdapter 0.043478264.3%
jalview.ws.jws2.JabaParamStore   jalview.ws.jws2.JabaParamStore 0.0416666684.2%
jalview.gui.SliderPanel   jalview.gui.SliderPanel 0.0348837233.5%
jalview.gui.StructureViewer   jalview.gui.StructureViewer 0.0346534663.5%
jalview.ws.jws1.JPredClient   jalview.ws.jws1.JPredClient 0.0310559013.1%
jalview.ext.jmol.JmolCommands   jalview.ext.jmol.JmolCommands 0.0275590552.8%
jalview.schemes.ClustalxColourScheme   jalview.schemes.ClustalxColourScheme 0.0254237282.5%
jalview.controller.AlignViewController   jalview.controller.AlignViewController 0.0238907862.4%
jalview.analysis.AlignmentUtils   jalview.analysis.AlignmentUtils 0.0229809582.3%
jalview.datamodel.ColumnSelection   jalview.datamodel.ColumnSelection 0.017182131.7%
jalview.ws.dbsources.Uniprot   jalview.ws.dbsources.Uniprot 0.0155642021.6%
mc_view.PDBfile   mc_view.PDBfile 0.0150375941.5%
jalview.datamodel.SearchResults   jalview.datamodel.SearchResults 0.0128205131.3%
jalview.gui.SeqPanel   jalview.gui.SeqPanel 0.0125082291.3%
jalview.io.SequenceAnnotationReport   jalview.io.SequenceAnnotationReport 0.0122699381.2%
jalview.util.HttpUtils   jalview.util.HttpUtils 0.01169590651.2%
jalview.bin.Jalview   jalview.bin.Jalview 0.0099277981%
jalview.gui.SequenceFetcher   jalview.gui.SequenceFetcher 0.0089285720.9%
jalview.ext.ensembl.EnsemblGene   jalview.ext.ensembl.EnsemblGene 0.0081632650.8%
jalview.gui.QuitHandler   jalview.gui.QuitHandler 0.00722021660.7%
com.stevesoft.pat.CaseMgr   com.stevesoft.pat.CaseMgr 0.00278551530.3%
jalview.schemes.ResidueProperties   jalview.schemes.ResidueProperties 0.00105042020.1%