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com.stevesoft.pat.patInf
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com.stevesoft.pat.Rthings
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mc_view.Residue
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mc_view.PDBChain
mc_view.PDBChain
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mc_view.Bond
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jalview.schemes.PurinePyrimidineColourScheme
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org.json.simple.parser.Yylex
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jalview.datamodel.ResidueCount
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jalview.util.Format
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jalview.util.Comparison
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jalview.datamodel.Annotation
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org.json.simple.parser.JSONParser
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com.stevesoft.pat.oneChar
com.stevesoft.pat.oneChar
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jalview.schemes.JalviewColourScheme
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mc_view.Atom
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jalview.io.IdentifyFile
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jalview.io.FileParse
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jalview.ws.jws1.WS1Client
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com.stevesoft.pat.Range
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com.stevesoft.pat.Bracket
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com.stevesoft.pat.Regex
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jalview.io.JalviewFileChooser
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com.stevesoft.pat.Pattern
com.stevesoft.pat.Pattern
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com.stevesoft.pat.patInt
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jalview.util.StringUtils
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jalview.util.ColorUtils
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jalview.datamodel.Alignment
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jalview.ws.seqfetcher.ASequenceFetcher
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jalview.schemes.TCoffeeColourScheme
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jalview.io.AppletFormatAdapter
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jalview.ws.dbsources.EBIAlfaFold
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jalview.fts.service.threedbeacons.TDBeaconsFTSRestClient
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jalview.bin.Console
jalview.bin.Console
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jalview.datamodel.GroupSet
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jalview.gui.AlignFrame
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jalview.io.FormatAdapter
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jalview.util.ShortcutKeyMaskExWrapper
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jalview.datamodel.Mapping
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com.stevesoft.pat.parsePerl
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jalview.datamodel.ContactMatrixI
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org.json.simple.parser.Yytoken
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jalview.fts.service.pdb.PDBFTSRestClient
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jalview.gui.SeqCanvas
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jalview.util.JSONUtils
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com.stevesoft.pat.Or
com.stevesoft.pat.Or
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jalview.ws.dbsources.Pfam
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jalview.util.CaseInsensitiveString
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jalview.ws.jws1.Discoverer
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jalview.gui.Desktop
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jalview.gui.Console
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jalview.schemes.RNAHelicesColour
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jalview.gui.ProgressBar
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jalview.ws.seqfetcher.DbSourceProxyImpl
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com.stevesoft.pat.OrMark
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jalview.datamodel.ColumnSelection.IntList
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com.stevesoft.pat.FastMulti
com.stevesoft.pat.FastMulti
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jalview.schemes.ColourSchemes
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jalview.gui.IdPanel
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jalview.schemes.PIDColourScheme
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com.stevesoft.pat.RegOpt
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jalview.ws.dbsources.Pdb
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jalview.analysis.CrossRef
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jalview.gui.StructureChooser
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jalview.datamodel.DBRefEntry
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ext.vamsas.ServiceHandle
ext.vamsas.ServiceHandle
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jalview.gui.ViewSelectionMenu
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jalview.ws.jws2.AAConClient
jalview.ws.jws2.AAConClient
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0.0571428575.7%
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jalview.structure.StructureImportSettings
jalview.structure.StructureImportSettings
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jalview.analysis.GeneticCodes
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0.0496894425%
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jalview.bin.Cache
jalview.bin.Cache
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jalview.structure.StructureMapping
jalview.structure.StructureMapping
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jalview.util.DBRefUtils
jalview.util.DBRefUtils
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jalview.datamodel.ColumnSelection
jalview.datamodel.ColumnSelection
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jalview.ws.jws1.JPredClient
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jalview.gui.WsParamSetManager
jalview.gui.WsParamSetManager
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jalview.analysis.AlignmentUtils
jalview.analysis.AlignmentUtils
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org.json.simple.JSONObject
org.json.simple.JSONObject
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jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
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jalview.gui.structurechooser.ThreeDBStructureChooserQuerySource
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jalview.ws.jws1.SeqSearchWSClient
jalview.ws.jws1.SeqSearchWSClient
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0.029629633%
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jalview.ext.ensembl.EnsemblRestClient
jalview.ext.ensembl.EnsemblRestClient
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jalview.datamodel.HiddenSequences
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jalview.ws.jws1.MsaWSClient
jalview.ws.jws1.MsaWSClient
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jalview.util.MappingUtils
jalview.util.MappingUtils
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jalview.ws.dbsources.Uniprot
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jalview.gui.structurechooser.PDBStructureChooserQuerySource
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jalview.schemes.ClustalxColourScheme
jalview.schemes.ClustalxColourScheme
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jalview.ext.ensembl.EnsemblGene
jalview.ext.ensembl.EnsemblGene
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jalview.datamodel.HiddenColumnsCursor
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jalview.gui.StructureViewer
jalview.gui.StructureViewer
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jalview.controller.AlignViewController
jalview.controller.AlignViewController
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jalview.gui.SequenceFetcher
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jalview.datamodel.SearchResults
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jalview.gui.SeqPanel
jalview.gui.SeqPanel
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jalview.io.SequenceAnnotationReport
jalview.io.SequenceAnnotationReport
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jalview.bin.Jalview
jalview.bin.Jalview
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jalview.ws.jws2.RNAalifoldClient
jalview.ws.jws2.RNAalifoldClient
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jalview.bin.argparser.BootstrapArgs
jalview.bin.argparser.BootstrapArgs
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org.json.simple.JSONArray
org.json.simple.JSONArray
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jalview.renderer.seqfeatures.FeatureRenderer
jalview.renderer.seqfeatures.FeatureRenderer
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com.stevesoft.pat.RegRes
com.stevesoft.pat.RegRes
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jalview.gui.QuitHandler
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jalview.ext.ensembl.EnsemblSeqProxy
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jalview.ext.jmol.JalviewJmolBinding
jalview.ext.jmol.JalviewJmolBinding
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com.stevesoft.pat.CaseMgr
com.stevesoft.pat.CaseMgr
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jalview.schemes.ResidueProperties
jalview.schemes.ResidueProperties
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