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Coverage Report

Test pfamFileDataExtraction

Test
pfamFileDataExtraction 1PASS 11 Nov 20:44:11 0.101
 
pfamFileDataExtraction
com.stevesoft.pat.patInf   com.stevesoft.pat.patInf 1.0100%
com.stevesoft.pat.FastChar   com.stevesoft.pat.FastChar 1.0100%
com.stevesoft.pat.OrMark   com.stevesoft.pat.OrMark 0.8585%
com.stevesoft.pat.Rthings   com.stevesoft.pat.Rthings 0.8461538684.6%
com.stevesoft.pat.SubMark   com.stevesoft.pat.SubMark 0.880%
com.stevesoft.pat.StrPos   com.stevesoft.pat.StrPos 0.779069877.9%
com.stevesoft.pat.Skip2   com.stevesoft.pat.Skip2 0.777777877.8%
com.stevesoft.pat.FastBracket   com.stevesoft.pat.FastBracket 0.7544910375.4%
com.stevesoft.pat.Bracket   com.stevesoft.pat.Bracket 0.7575%
com.stevesoft.pat.oneChar   com.stevesoft.pat.oneChar 0.685714368.6%
com.stevesoft.pat.Range   com.stevesoft.pat.Range 0.681818268.2%
com.stevesoft.pat.patInt   com.stevesoft.pat.patInt 0.662566.3%
com.stevesoft.pat.wrap.StringWrap   com.stevesoft.pat.wrap.StringWrap 0.62562.5%
com.stevesoft.pat.FastMulti   com.stevesoft.pat.FastMulti 0.601851960.2%
com.stevesoft.pat.Or   com.stevesoft.pat.Or 0.589743659%
com.stevesoft.pat.Pattern   com.stevesoft.pat.Pattern 0.583333358.3%
com.stevesoft.pat.Start   com.stevesoft.pat.Start 0.5454545654.5%
com.stevesoft.pat.RegOpt   com.stevesoft.pat.RegOpt 0.5251798652.5%
com.stevesoft.pat.NullPattern   com.stevesoft.pat.NullPattern 0.550%
jalview.io.AlignFile   jalview.io.AlignFile 0.4931506849.3%
jalview.gui.SplashScreen.SplashImage   jalview.gui.SplashScreen.SplashImage 0.4705882447.1%
com.stevesoft.pat.Branch   com.stevesoft.pat.Branch 0.4630872646.3%
com.stevesoft.pat.Skip   com.stevesoft.pat.Skip 0.4594594545.9%
jalview.datamodel.HiddenCursorPosition   jalview.datamodel.HiddenCursorPosition 0.4285714342.9%
jalview.io.StockholmFile   jalview.io.StockholmFile 0.4037433340.4%
com.stevesoft.pat.Regex   com.stevesoft.pat.Regex 0.392727339.3%
com.stevesoft.pat.DotMulti   com.stevesoft.pat.DotMulti 0.3623188436.2%
jalview.util.Comparison   jalview.util.Comparison 0.3385826633.9%
com.stevesoft.pat.StringRule   com.stevesoft.pat.StringRule 0.2525%
jalview.io.FileParse   jalview.io.FileParse 0.2451253524.5%
jalview.datamodel.SequenceCursor   jalview.datamodel.SequenceCursor 0.2333333323.3%
jalview.io.IdentifyFile   jalview.io.IdentifyFile 0.2222222222.2%
com.stevesoft.pat.RegRes   com.stevesoft.pat.RegRes 0.217391321.7%
com.stevesoft.pat.End   com.stevesoft.pat.End 0.2068965620.7%
jalview.datamodel.Sequence   jalview.datamodel.Sequence 0.1859861618.6%
jalview.datamodel.AlignmentAnnotation   jalview.datamodel.AlignmentAnnotation 0.1722846517.2%
jalview.datamodel.DBRefEntry   jalview.datamodel.DBRefEntry 0.1643835616.4%
com.stevesoft.pat.parsePerl   com.stevesoft.pat.parsePerl 0.1598639516%
jalview.util.DBRefUtils   jalview.util.DBRefUtils 0.1057401810.6%
jalview.gui.SplashScreen   jalview.gui.SplashScreen 0.0974025959.7%
jalview.gui.Desktop.MyDesktopPane   jalview.gui.Desktop.MyDesktopPane 0.09523819.5%
com.stevesoft.pat.ReplaceRule   com.stevesoft.pat.ReplaceRule 0.08771938.8%
jalview.util.CaseInsensitiveString   jalview.util.CaseInsensitiveString 0.086956528.7%
jalview.gui.Console   jalview.gui.Console 0.082568818.3%
jalview.datamodel.Annotation   jalview.datamodel.Annotation 0.0714285757.1%
jalview.log.JLogger   jalview.log.JLogger 0.065934076.6%
jalview.io.AppletFormatAdapter   jalview.io.AppletFormatAdapter 0.065217396.5%
jalview.datamodel.PDBEntry   jalview.datamodel.PDBEntry 0.065217396.5%
jalview.bin.Console   jalview.bin.Console 0.05911335.9%
jalview.datamodel.Alignment   jalview.datamodel.Alignment 0.0456238354.6%
jalview.bin.Cache   jalview.bin.Cache 0.0316804423.2%
jalview.io.FileFormat   jalview.io.FileFormat 0.0310077523.1%
jalview.util.Platform   jalview.util.Platform 0.0188679251.9%
jalview.datamodel.HiddenColumnsCursor   jalview.datamodel.HiddenColumnsCursor 0.0156251.6%
jalview.datamodel.features.SequenceFeatures   jalview.datamodel.features.SequenceFeatures 0.0127388541.3%
jalview.gui.Desktop   jalview.gui.Desktop 0.00964812751%
jalview.datamodel.HiddenSequences   jalview.datamodel.HiddenSequences 0.009132420.9%
jalview.schemes.ResidueProperties   jalview.schemes.ResidueProperties 0.0089285720.9%
com.stevesoft.pat.CaseMgr   com.stevesoft.pat.CaseMgr 0.00278551530.3%
jalview.datamodel.HiddenColumns   jalview.datamodel.HiddenColumns 0.00235849060.2%