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jalview.io.DataSourceType
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jalview.schemes.TaylorColourScheme
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1.0100%
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1.0100%
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1.0100%
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1.0100%
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1.0100%
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0.550%
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jalview.viewmodel.ViewportProperties
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jalview.io.BioJsHTMLOutput
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jalview.schemes.Consensus
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jalview.util.ShortcutKeyMaskExWrapper11
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jalview.ws.jws2.JabaWsServerQuery
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org.json.simple.parser.Yylex
org.json.simple.parser.Yylex
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jalview.io.FileFormats
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jalview.util.MessageManager
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jalview.io.AlignFile
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jalview.io.FileLoader
jalview.io.FileLoader
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0.3511705735.1%
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jalview.schemes.IdColourScheme
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0.347826134.8%
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jalview.schemes.RNAHelicesColour
jalview.schemes.RNAHelicesColour
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jalview.io.FastaFile
jalview.io.FastaFile
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0.315315331.5%
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jalview.util.Comparison
jalview.util.Comparison
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0.3110236231.1%
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org.json.simple.parser.JSONParser
org.json.simple.parser.JSONParser
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0.2945544429.5%
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jalview.viewmodel.styles.ViewStyle
jalview.viewmodel.styles.ViewStyle
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ext.vamsas.ServiceHandle
ext.vamsas.ServiceHandle
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jalview.gui.AlignViewport
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jalview.schemes.ColourSchemes
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jalview.io.IdentifyFile
jalview.io.IdentifyFile
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0.279365127.9%
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jalview.ws.jws1.Discoverer
jalview.ws.jws1.Discoverer
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0.262820526.3%
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jalview.gui.AlignmentPanel
jalview.gui.AlignmentPanel
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jalview.util.HttpUtils
jalview.util.HttpUtils
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0.2397660824%
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jalview.schemes.Blosum62ColourScheme
jalview.schemes.Blosum62ColourScheme
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0.2352941223.5%
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jalview.gui.PaintRefresher
jalview.gui.PaintRefresher
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0.2323943723.2%
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jalview.log.JalviewAppender
jalview.log.JalviewAppender
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0.2222222222.2%
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jalview.viewmodel.AlignmentViewport
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jalview.analysis.AAFrequency
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0.1940928319.4%
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jalview.io.JalviewFileChooser
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0.1743869217.4%
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jalview.analysis.AnnotationSorter
jalview.analysis.AnnotationSorter
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jalview.io.FileParse
jalview.io.FileParse
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0.164345416.4%
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jalview.gui.Desktop.MyDesktopManager
jalview.gui.Desktop.MyDesktopManager
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jalview.util.Format
jalview.util.Format
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0.1490683314.9%
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jalview.gui.Desktop.MyDesktopPane
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jalview.viewmodel.ViewportRanges
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jalview.datamodel.Alignment
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jalview.io.FormatAdapter
jalview.io.FormatAdapter
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0.1212%
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jalview.gui.JvSwingUtils
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jalview.analysis.scoremodels.ScoreModels
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jalview.datamodel.Annotation
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jalview.util.ShortcutKeyMaskExWrapper
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jalview.io.FileFormat
jalview.io.FileFormat
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jalview.bin.Console
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jalview.io.AppletFormatAdapter
jalview.io.AppletFormatAdapter
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0.0993788849.9%
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org.json.simple.parser.Yytoken
org.json.simple.parser.Yytoken
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jalview.util.ChannelProperties
jalview.util.ChannelProperties
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jalview.workers.AlignCalcWorker
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jalview.datamodel.Sequence
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jalview.util.JSONUtils
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jalview.gui.Desktop
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jalview.util.ColorUtils
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jalview.gui.Console
jalview.gui.Console
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jalview.util.Platform
jalview.util.Platform
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0.0707547147.1%
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jalview.gui.IdPanel
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0.067264576.7%
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jalview.log.JLogger
jalview.log.JLogger
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0.065934076.6%
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jalview.gui.IdwidthAdjuster
jalview.gui.IdwidthAdjuster
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0.0657894766.6%
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jalview.renderer.ResidueShader
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jalview.analysis.CrossRef
jalview.analysis.CrossRef
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jalview.structure.StructureSelectionManager
jalview.structure.StructureSelectionManager
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jalview.analysis.scoremodels.ScoreMatrix
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jalview.gui.ViewSelectionMenu
jalview.gui.ViewSelectionMenu
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0.059405945.9%
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jalview.urls.CustomUrlProvider
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jalview.gui.AnnotationPanel
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jalview.analysis.GeneticCodes
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jalview.bin.Cache
jalview.bin.Cache
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0.0413223134.1%
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jalview.util.UrlLink
jalview.util.UrlLink
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0.037878793.8%
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org.json.simple.JSONObject
org.json.simple.JSONObject
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0.037735853.8%
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jalview.datamodel.ColumnSelection.IntList
jalview.datamodel.ColumnSelection.IntList
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0.0373831763.7%
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jalview.urls.IdentifiersUrlProvider
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jalview.gui.IdCanvas
jalview.gui.IdCanvas
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0.0245614032.5%
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jalview.util.DBRefUtils
jalview.util.DBRefUtils
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0.0241691842.4%
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jalview.renderer.ResidueColourFinder
jalview.renderer.ResidueColourFinder
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0.0238095242.4%
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jalview.gui.ScalePanel
jalview.gui.ScalePanel
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0.02343752.3%
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jalview.util.StringUtils
jalview.util.StringUtils
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0.021538462.2%
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jalview.datamodel.HiddenColumnsCursor
jalview.datamodel.HiddenColumnsCursor
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0.0156251.6%
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jalview.gui.SequenceRenderer
jalview.gui.SequenceRenderer
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jalview.controller.AlignViewController
jalview.controller.AlignViewController
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jalview.analysis.AlignSeq
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jalview.datamodel.features.SequenceFeatures
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jalview.gui.SeqPanel
jalview.gui.SeqPanel
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jalview.io.SequenceAnnotationReport
jalview.io.SequenceAnnotationReport
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jalview.renderer.AnnotationRenderer
jalview.renderer.AnnotationRenderer
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jalview.gui.AnnotationLabels
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jalview.bin.Jalview
jalview.bin.Jalview
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jalview.ws.jws2.Jws2Discoverer
jalview.ws.jws2.Jws2Discoverer
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jalview.datamodel.HiddenSequences
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jalview.bin.argparser.BootstrapArgs
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0.0082644620.8%
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org.json.simple.JSONArray
org.json.simple.JSONArray
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0.0080645160.8%
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jalview.gui.SeqCanvas
jalview.gui.SeqCanvas
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0.0080160320.8%
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jalview.renderer.seqfeatures.FeatureRenderer
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jalview.gui.QuitHandler
jalview.gui.QuitHandler
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jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
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jalview.datamodel.ColumnSelection
jalview.datamodel.ColumnSelection
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0.00343642620.3%
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