|
jalview.renderer.ScaleRenderer.ScaleMark
jalview.renderer.ScaleRenderer.ScaleMark
|
1.0100%
|
|
|
jalview.util.MapUtils
jalview.util.MapUtils
|
0.695652269.6%
|
|
|
jalview.ws.SequenceFetcher
jalview.ws.SequenceFetcher
|
0.678571467.9%
|
|
|
jalview.util.ParseHtmlBodyAndLinks
jalview.util.ParseHtmlBodyAndLinks
|
0.594202959.4%
|
|
|
jalview.renderer.ScaleRenderer
jalview.renderer.ScaleRenderer
|
0.5656%
|
|
|
jalview.datamodel.HiddenCursorPosition
jalview.datamodel.HiddenCursorPosition
|
0.4285714342.9%
|
|
|
jalview.ws.dbsources.EmblSource
jalview.ws.dbsources.EmblSource
|
0.440%
|
|
|
org.json.simple.parser.Yylex
org.json.simple.parser.Yylex
|
0.3980891739.8%
|
|
|
jalview.gui.SequenceRenderer
jalview.gui.SequenceRenderer
|
0.3942307839.4%
|
|
|
jalview.datamodel.FloatContactMatrix
jalview.datamodel.FloatContactMatrix
|
0.3838%
|
|
|
jalview.ws.datamodel.alphafold.PAEContactMatrix
jalview.ws.datamodel.alphafold.PAEContactMatrix
|
0.3097345231%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.291338629.1%
|
|
|
jalview.ws.dbsources.EmblCdsSource
jalview.ws.dbsources.EmblCdsSource
|
0.285714328.6%
|
|
|
org.json.simple.parser.JSONParser
org.json.simple.parser.JSONParser
|
0.2846534628.5%
|
|
|
jalview.renderer.ResidueColourFinder
jalview.renderer.ResidueColourFinder
|
0.2619047826.2%
|
|
|
jalview.renderer.AnnotationRendererFactory
jalview.renderer.AnnotationRendererFactory
|
0.2525%
|
|
|
jalview.schemes.ZappoColourScheme
jalview.schemes.ZappoColourScheme
|
0.2525%
|
|
|
jalview.datamodel.ContactMapHolder
jalview.datamodel.ContactMapHolder
|
0.2307692323.1%
|
|
|
jalview.renderer.AnnotationRenderer
jalview.renderer.AnnotationRenderer
|
0.221920322.2%
|
|
|
jalview.gui.IdCanvas
jalview.gui.IdCanvas
|
0.2210526322.1%
|
|
|
jalview.gui.IdwidthAdjuster
jalview.gui.IdwidthAdjuster
|
0.1842105218.4%
|
|
|
jalview.gui.AnnotationLabels
jalview.gui.AnnotationLabels
|
0.1829689318.3%
|
|
|
jalview.gui.ScalePanel
jalview.gui.ScalePanel
|
0.179687518%
|
|
|
jalview.datamodel.Annotation
jalview.datamodel.Annotation
|
0.1428571514.3%
|
|
|
jalview.datamodel.AlignmentAnnotation
jalview.datamodel.AlignmentAnnotation
|
0.1237512.4%
|
|
|
jalview.workers.AlignCalcManager
jalview.workers.AlignCalcManager
|
0.1190476211.9%
|
|
|
jalview.viewmodel.styles.ViewStyle
jalview.viewmodel.styles.ViewStyle
|
0.117187511.7%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.0977508659.8%
|
|
|
org.json.simple.parser.Yytoken
org.json.simple.parser.Yytoken
|
0.096774199.7%
|
|
|
jalview.ws.dbsources.Xfam
jalview.ws.dbsources.Xfam
|
0.086956528.7%
|
|
|
jalview.ext.ensembl.EnsemblSequenceFetcher
jalview.ext.ensembl.EnsemblSequenceFetcher
|
0.0833333368.3%
|
|
|
jalview.gui.AlignmentPanel
jalview.gui.AlignmentPanel
|
0.081272098.1%
|
|
|
jalview.ws.dbsources.EBIAlfaFold
jalview.ws.dbsources.EBIAlfaFold
|
0.078358217.8%
|
|
|
jalview.gui.JvSwingUtils
jalview.gui.JvSwingUtils
|
0.074829937.5%
|
|
|
jalview.util.MessageManager
jalview.util.MessageManager
|
0.0714285757.1%
|
|
|
jalview.schemes.ResidueColourScheme
jalview.schemes.ResidueColourScheme
|
0.0714285757.1%
|
|
|
jalview.log.JLogger
jalview.log.JLogger
|
0.065934076.6%
|
|
|
jalview.gui.SeqCanvas
jalview.gui.SeqCanvas
|
0.064128266.4%
|
|
|
jalview.viewmodel.AlignmentViewport
jalview.viewmodel.AlignmentViewport
|
0.0622154776.2%
|
|
|
jalview.util.Platform
jalview.util.Platform
|
0.0613207566.1%
|
|
|
jalview.gui.AnnotationPanel
jalview.gui.AnnotationPanel
|
0.060924376.1%
|
|
|
jalview.ws.datamodel.alphafold.MappableContactMatrix
jalview.ws.datamodel.alphafold.MappableContactMatrix
|
0.0585774075.9%
|
|
|
jalview.ws.seqfetcher.ASequenceFetcher
jalview.ws.seqfetcher.ASequenceFetcher
|
0.0577777775.8%
|
|
|
jalview.ws.seqfetcher.DbSourceProxyImpl
jalview.ws.seqfetcher.DbSourceProxyImpl
|
0.0540540555.4%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.051210435.1%
|
|
|
jalview.bin.Console
jalview.bin.Console
|
0.0492610824.9%
|
|
|
jalview.structure.StructureMapping
jalview.structure.StructureMapping
|
0.0466321264.7%
|
|
|
jalview.ws.dbsources.Pdb
jalview.ws.dbsources.Pdb
|
0.042553194.3%
|
|
|
org.json.simple.JSONObject
org.json.simple.JSONObject
|
0.037735853.8%
|
|
|
jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
|
0.037735853.8%
|
|
|
jalview.util.MapList
jalview.util.MapList
|
0.0358255473.6%
|
|
|
jalview.bin.Cache
jalview.bin.Cache
|
0.0316804423.2%
|
|
|
jalview.renderer.ResidueShader
jalview.renderer.ResidueShader
|
0.0285714292.9%
|
|
|
jalview.datamodel.HiddenSequences
jalview.datamodel.HiddenSequences
|
0.027397262.7%
|
|
|
jalview.structure.StructureSelectionManager
jalview.structure.StructureSelectionManager
|
0.0266666672.7%
|
|
|
jalview.viewmodel.ViewportRanges
jalview.viewmodel.ViewportRanges
|
0.0264026412.6%
|
|
|
jalview.util.DBRefUtils
jalview.util.DBRefUtils
|
0.0211480372.1%
|
|
|
jalview.datamodel.ColumnSelection.IntList
jalview.datamodel.ColumnSelection.IntList
|
0.0186915881.9%
|
|
|
jalview.gui.AlignFrame
jalview.gui.AlignFrame
|
0.015764961.6%
|
|
|
jalview.datamodel.HiddenColumnsCursor
jalview.datamodel.HiddenColumnsCursor
|
0.0156251.6%
|
|
|
jalview.ws.dbsources.Uniprot
jalview.ws.dbsources.Uniprot
|
0.0155642021.6%
|
|
|
jalview.gui.AlignViewport
jalview.gui.AlignViewport
|
0.013698631.4%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.0127388541.3%
|
|
|
jalview.gui.IdPanel
jalview.gui.IdPanel
|
0.008968610.9%
|
|
|
jalview.gui.SequenceFetcher
jalview.gui.SequenceFetcher
|
0.0089285720.9%
|
|
|
jalview.datamodel.GroupSet
jalview.datamodel.GroupSet
|
0.008620690.9%
|
|
|
jalview.ext.ensembl.EnsemblGene
jalview.ext.ensembl.EnsemblGene
|
0.0081632650.8%
|
|
|
org.json.simple.JSONArray
org.json.simple.JSONArray
|
0.0080645160.8%
|
|
|
jalview.datamodel.ColumnSelection
jalview.datamodel.ColumnSelection
|
0.00687285230.7%
|
|
|
jalview.bin.Jalview
jalview.bin.Jalview
|
0.00361010830.4%
|
|
