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jalview.io.gff.ExonerateHelperTest.testAddExonerateGffToAlignmentjalview.io.gff.ExonerateHelperTest.testAddExonerateGffToAlignment
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jalview.project.Jalview2xmlTests.testTCoffeeScoresjalview.project.Jalview2xmlTests.testTCoffeeScores
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jalview.io.StockholmFileTest.stockholmFileRnaSSAlphaCharsjalview.io.StockholmFileTest.stockholmFileRnaSSAlphaChars
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jalview.project.Jalview2xmlTests.testColourByAnnotScoresjalview.project.Jalview2xmlTests.testColourByAnnotScores
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jalview.gui.DesktopTests.testInternalCopyPastejalview.gui.DesktopTests.testInternalCopyPaste
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jalview.gui.SeqPanelTest.testFindMousePosition_wrapped_noAnnotationsjalview.gui.SeqPanelTest.testFindMousePosition_wrapped_noAnnotations
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jalview.gui.SeqPanelTest.testFindColumn_unwrappedjalview.gui.SeqPanelTest.testFindColumn_unwrapped
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jalview.gui.AlignViewportTest.testSetGetHasSearchResultsjalview.gui.AlignViewportTest.testSetGetHasSearchResults
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jalview.gui.AlignViewportTest.testSetGlobalColourSchemejalview.gui.AlignViewportTest.testSetGlobalColourScheme
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jalview.project.Jalview2xmlTests.testRNAStructureRecoveryjalview.project.Jalview2xmlTests.testRNAStructureRecovery
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jalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTestjalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTest
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jalview.bin.CommandsTest.commandsOpenTestjalview.bin.CommandsTest.commandsOpenTest
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jalview.project.Jalview2xmlTests.testStoreAndRecoverGroupRepSeqsjalview.project.Jalview2xmlTests.testStoreAndRecoverGroupRepSeqs
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jalview.bin.CommandsTest.commandsOpenTestjalview.bin.CommandsTest.commandsOpenTest
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jalview.gui.QuitHandlerTest.testInstantQuitjalview.gui.QuitHandlerTest.testInstantQuit
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jalview.gui.SeqPanelTest.testFindMousePosition_wrapped_annotationsjalview.gui.SeqPanelTest.testFindMousePosition_wrapped_annotations
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1PASS
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jalview.io.FeaturesFileTest.testPrintGffFormatjalview.io.FeaturesFileTest.testPrintGffFormat
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jalview.io.FeaturesFileTest.testPrintJalviewFormat_withFiltersjalview.io.FeaturesFileTest.testPrintJalviewFormat_withFilters
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jalview.io.FeaturesFileTest.testPrintGffFormat_withFiltersjalview.io.FeaturesFileTest.testPrintGffFormat_withFilters
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jalview.io.FeaturesFileTest.testParsejalview.io.FeaturesFileTest.testParse
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jalview.io.StockholmFileTest.pfamFileDataExtractionjalview.io.StockholmFileTest.pfamFileDataExtraction
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1PASS
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0.23955432
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mc_view.PDBfileTest.testParse_withJmol_noAnnotationsmc_view.PDBfileTest.testParse_withJmol_noAnnotations
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1PASS
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0.23955432
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mc_view.PDBfileTest.testParse_withJmolAddAlignmentAnnotationsmc_view.PDBfileTest.testParse_withJmolAddAlignmentAnnotations
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1PASS
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0.2339833
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jalview.project.Jalview2xmlTests.testStoreAndRecoverReferenceSeqSettingsjalview.project.Jalview2xmlTests.testStoreAndRecoverReferenceSeqSettings
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|
0.2339833
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverExpandedviewsjalview.project.Jalview2xmlTests.testStoreAndRecoverExpandedviews
|
1PASS
|
|
|
0.23119777
|
jalview.project.Jalview2xmlTests.gatherViewsHerejalview.project.Jalview2xmlTests.gatherViewsHere
|
1PASS
|
|
|
0.23119777
|
jalview.project.Jalview2xmlTests.viewRefPdbAnnotationjalview.project.Jalview2xmlTests.viewRefPdbAnnotation
|
1PASS
|
|
|
0.23119777
|
jalview.project.Jalview2xmlTests.noDuplicatePdbMappingsMadejalview.project.Jalview2xmlTests.noDuplicatePdbMappingsMade
|
1PASS
|
|
|
0.23119777
|
jalview.project.Jalview2xmlTests.testCopyViewSettingsjalview.project.Jalview2xmlTests.testCopyViewSettings
|
1PASS
|
|
|
0.22841226
|
jalview.io.FeaturesFileTest.readGff3Filejalview.io.FeaturesFileTest.readGff3File
|
1PASS
|
|
|
0.22284123
|
jalview.io.EmblFlatFileTest.testParsejalview.io.EmblFlatFileTest.testParse
|
1PASS
|
|
|
0.22284123
|
jalview.io.GenBankFileTest.testParsejalview.io.GenBankFileTest.testParse
|
1PASS
|
|
|
0.22284123
|
jalview.io.FeaturesFileTest.simpleGff3RelaxedIdMatchingjalview.io.FeaturesFileTest.simpleGff3RelaxedIdMatching
|
1PASS
|
|
|
0.22284123
|
jalview.io.PhylipFileTests.testSequentialDataExtractionjalview.io.PhylipFileTests.testSequentialDataExtraction
|
1PASS
|
|
|
0.22284123
|
jalview.io.EmblFlatFileTest.testParseToRNAjalview.io.EmblFlatFileTest.testParseToRNA
|
1PASS
|
|
|
0.22284123
|
jalview.io.FeaturesFileTest.simpleGff3FileClassjalview.io.FeaturesFileTest.simpleGff3FileClass
|
1PASS
|
|
|
0.22284123
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_aaIndexBlosum80jalview.io.ScoreMatrixFileTest.testParseMatrix_aaIndexBlosum80
|
1PASS
|
|
|
0.22284123
|
jalview.io.PhylipFileTests.testInterleavedDataExtractionjalview.io.PhylipFileTests.testInterleavedDataExtraction
|
1PASS
|
|
|
0.2172702
|
jalview.project.Jalview2xmlTests.testStoreAndRestoreIDwidthAndAnnotationHeightjalview.project.Jalview2xmlTests.testStoreAndRestoreIDwidthAndAnnotationHeight
|
1PASS
|
|
|
0.21448468
|
jalview.project.Jalview2xmlTests.testAutoShowOverviewForLegacyProjectsjalview.project.Jalview2xmlTests.testAutoShowOverviewForLegacyProjects
|
1PASS
|
|
|
0.20891365
|
jalview.io.FileIOTester.testGzipIojalview.io.FileIOTester.testGzipIo
|
1PASS
|
|
|
0.20334262
|
jalview.io.AnnotatedPDBFileInputTest.testJalviewProjectRelocationAnnotationjalview.io.AnnotatedPDBFileInputTest.testJalviewProjectRelocationAnnotation
|
1PASS
|
|
|
0.20334262
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverPDBEntryjalview.project.Jalview2xmlTests.testStoreAndRecoverPDBEntry
|
1PASS
|
|
|
0.20334262
|
jalview.bin.CommandsTest.structureImageOutputTestjalview.bin.CommandsTest.structureImageOutputTest
|
3FAIL
|
|
|
0.20334262
|
jalview.ext.jmol.JmolViewerTest.testAddStrToSingleSeqViewJMoljalview.ext.jmol.JmolViewerTest.testAddStrToSingleSeqViewJMol
|
1PASS
|
|
|
0.20334262
|
jalview.ext.jmol.JmolViewerTest.testSingleSeqViewJMoljalview.ext.jmol.JmolViewerTest.testSingleSeqViewJMol
|
1PASS
|
|
|
0.20334262
|
jalview.bin.CommandsTest.structureImageOutputTestjalview.bin.CommandsTest.structureImageOutputTest
|
1PASS
|
|
|
0.1977716
|
jalview.io.FileIOTester.testGziplocalFileIOjalview.io.FileIOTester.testGziplocalFileIO
|
1PASS
|
|
|
0.1977716
|
jalview.io.FileIOTester.testNonGzipURLIOjalview.io.FileIOTester.testNonGzipURLIO
|
1PASS
|
|
|
0.18941504
|
jalview.io.AnnotationFileIOTest.testAnnotateAlignmentViewjalview.io.AnnotationFileIOTest.testAnnotateAlignmentView
|
1PASS
|
|
|
0.18941504
|
jalview.io.gff.GffTests.testResolveExonerateGffjalview.io.gff.GffTests.testResolveExonerateGff
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.FileIOTester.testNonGziplocalFileIOjalview.io.FileIOTester.testNonGziplocalFileIO
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.FileIOTester.testStarsInFasta1jalview.io.FileIOTester.testStarsInFasta1
|
1PASS
|
|
|
0.18662953
|
jalview.project.Jalview2xmlTests.testMergeDatasetsforManyViewsjalview.project.Jalview2xmlTests.testMergeDatasetsforManyViews
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.CrossRef2xmlTests.openCrossrefsForEnsemblTwicejalview.io.CrossRef2xmlTests.openCrossrefsForEnsemblTwice
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.project.Jalview2xmlTests.testMergeDatasetsforViewsjalview.project.Jalview2xmlTests.testMergeDatasetsforViews
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.ext.jmol.JmolParserTest.testFileParserjalview.ext.jmol.JmolParserTest.testFileParser
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.IdentifyFileTest.testIdentifyjalview.io.IdentifyFileTest.testIdentify
|
1PASS
|
|
|
0.18662953
|
jalview.io.FileIOTester.testStarsInFasta2jalview.io.FileIOTester.testStarsInFasta2
|
1PASS
|
|
|
0.18384402
|
jalview.io.JSONFileTest.testGrpParsed_colourNonejalview.io.JSONFileTest.testGrpParsed_colourNone
|
1PASS
|
|
|
0.17548746
|
jalview.io.TCoffeeScoreFileTest.testGetAsArrayjalview.io.TCoffeeScoreFileTest.testGetAsArray
|
1PASS
|
|
|
0.17548746
|
jalview.io.TCoffeeScoreFileTest.testGetAsListjalview.io.TCoffeeScoreFileTest.testGetAsList
|
1PASS
|
|
|
0.17548746
|
jalview.io.TCoffeeScoreFileTest.testReadHeaderjalview.io.TCoffeeScoreFileTest.testReadHeader
|
1PASS
|
|
|
0.16991644
|
jalview.ext.jmol.JmolParserTest.testLocalPDBIdjalview.ext.jmol.JmolParserTest.testLocalPDBId
|
1PASS
|
|
|
0.16991644
|
mc_view.PDBfileTest.testParse_withAnnotations_noSSmc_view.PDBfileTest.testParse_withAnnotations_noSS
|
1PASS
|
|
|
0.16991644
|
jalview.gui.AssociatePDBFileTest.testAssociatePDBFilejalview.gui.AssociatePDBFileTest.testAssociatePDBFile
|
1PASS
|
|
|
0.16991644
|
jalview.structure.StructureSelectionManagerTest.testSetMapping_seqFeaturesjalview.structure.StructureSelectionManagerTest.testSetMapping_seqFeatures
|
1PASS
|
|
|
0.16991644
|
jalview.io.RNAMLfileTest.testRnamlSeqImportjalview.io.RNAMLfileTest.testRnamlSeqImport
|
1PASS
|
|
|
0.16991644
|
mc_view.PDBfileTest.testParsemc_view.PDBfileTest.testParse
|
1PASS
|
|
|
0.16991644
|
jalview.io.TCoffeeScoreFileTest.testHeightAndWidthjalview.io.TCoffeeScoreFileTest.testHeightAndWidth
|
1PASS
|
|
|
0.16991644
|
jalview.io.TCoffeeScoreFileTest.testHeightAndWidthWithResidueNumbersjalview.io.TCoffeeScoreFileTest.testHeightAndWidthWithResidueNumbers
|
1PASS
|
|
|
0.16991644
|
jalview.io.TCoffeeScoreFileTest.testWrongFilejalview.io.TCoffeeScoreFileTest.testWrongFile
|
1PASS
|
|
|
0.1643454
|
jalview.schemes.PIDColourSchemeTest.testFindColour_ignoreGapsjalview.schemes.PIDColourSchemeTest.testFindColour_ignoreGaps
|
1PASS
|
|
|
0.1643454
|
jalview.renderer.ScaleRendererTest.testCalculateMarksjalview.renderer.ScaleRendererTest.testCalculateMarks
|
1PASS
|
|
|
0.1643454
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFindDistancesjalview.analysis.scoremodels.FeatureDistanceModelTest.testFindDistances
|
1PASS
|
|
|
0.1643454
|
jalview.structures.models.AAStructureBindingModelTest.testBuildColoursMapjalview.structures.models.AAStructureBindingModelTest.testBuildColoursMap
|
1PASS
|
|
|
0.1643454
|
jalview.schemes.ClustalxColourSchemeTest.testFindColour_ignoreGapsjalview.schemes.ClustalxColourSchemeTest.testFindColour_ignoreGaps
|
1PASS
|
|
|
0.1643454
|
jalview.gui.PairwiseAlignmentPanelTest.testConstructor_noSelectionGroupjalview.gui.PairwiseAlignmentPanelTest.testConstructor_noSelectionGroup
|
1PASS
|
|
|
0.1643454
|
jalview.io.StockholmFileTest.descriptionLineOutputjalview.io.StockholmFileTest.descriptionLineOutput
|
1PASS
|
|
|
0.1643454
|
jalview.datamodel.AlignmentViewTest.testGetVisibleContigsjalview.datamodel.AlignmentViewTest.testGetVisibleContigs
|
1PASS
|
|
|
0.1643454
|
jalview.renderer.seqfeatures.FeatureRendererTest.testGetColourjalview.renderer.seqfeatures.FeatureRendererTest.testGetColour
|
1PASS
|
|
|
0.1643454
|
jalview.io.TCoffeeScoreFileTest.testParsejalview.io.TCoffeeScoreFileTest.testParse
|
1PASS
|
|
|
0.1643454
|
jalview.io.vcf.VCFLoaderTest.testDoLoad_vepCsqjalview.io.vcf.VCFLoaderTest.testDoLoad_vepCsq
|
1PASS
|
|
|
0.1643454
|
jalview.gui.ScalePanelTest.testSelectColumns_withHiddenjalview.gui.ScalePanelTest.testSelectColumns_withHidden
|
1PASS
|
|
|
0.1643454
|
jalview.gui.AlignViewportTest.testDeregisterMapping_withNoReferencejalview.gui.AlignViewportTest.testDeregisterMapping_withNoReference
|
1PASS
|
|
|
0.1643454
|
jalview.io.vcf.VCFLoaderTest.testDoLoad_reverseStrandjalview.io.vcf.VCFLoaderTest.testDoLoad_reverseStrand
|
1PASS
|
|
|
0.1643454
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel_hiddenFirstColumnjalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel_hiddenFirstColumn
|
1PASS
|
|
|
0.1643454
|
jalview.controller.AlignViewControllerTest.testSelectColumnsWithHighlightjalview.controller.AlignViewControllerTest.testSelectColumnsWithHighlight
|
1PASS
|
|
|
0.1643454
|
jalview.io.AnnotationExporterTest.testAnnotationExportAsCSVjalview.io.AnnotationExporterTest.testAnnotationExportAsCSV
|
1PASS
|
|
|
0.1643454
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModeljalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel
|
1PASS
|
|
|
0.1643454
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFindComplementFeaturesAtResiduejalview.renderer.seqfeatures.FeatureRendererTest.testFindComplementFeaturesAtResidue
|
1PASS
|
|
|
0.1643454
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFindAllFeaturesjalview.renderer.seqfeatures.FeatureRendererTest.testFindAllFeatures
|
1PASS
|
|
|
0.1643454
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFindFeatureAt_PointFeaturejalview.analysis.scoremodels.FeatureDistanceModelTest.testFindFeatureAt_PointFeature
|
1PASS
|
|
|
0.1643454
|
jalview.schemes.ColourSchemesTest.testGetColourSchemejalview.schemes.ColourSchemesTest.testGetColourScheme
|
1PASS
|
|
|
0.1643454
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFindFeaturesAtColumnjalview.renderer.seqfeatures.FeatureRendererTest.testFindFeaturesAtColumn
|
1PASS
|
|
|
0.1643454
|
jalview.gui.SeqPanelTest.testFindMousePosition_wrapped_scales_longSequencejalview.gui.SeqPanelTest.testFindMousePosition_wrapped_scales_longSequence
|
1PASS
|
|
|
0.1643454
|
jalview.gui.AlignViewportTest.testDeregisterMapping_withReferencejalview.gui.AlignViewportTest.testDeregisterMapping_withReference
|
1PASS
|
|
|
0.1643454
|
jalview.gui.ScalePanelTest.testBuildPopupMenujalview.gui.ScalePanelTest.testBuildPopupMenu
|
1PASS
|
|
|
0.1643454
|
jalview.schemes.ClustalxColourSchemeTest.testFindColourjalview.schemes.ClustalxColourSchemeTest.testFindColour
|
1PASS
|
|
|
0.1643454
|
jalview.gui.AlignViewportTest.testGetConsensusSeqjalview.gui.AlignViewportTest.testGetConsensusSeq
|
1PASS
|
|
|
0.1643454
|
jalview.gui.AlignViewportTest.testDeregisterMapping_onCloseViewjalview.gui.AlignViewportTest.testDeregisterMapping_onCloseView
|
1PASS
|
|
|
0.1643454
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFilterFeaturesForDisplayjalview.renderer.seqfeatures.FeatureRendererTest.testFilterFeaturesForDisplay
|
1PASS
|
|
|
0.1643454
|
jalview.io.StockholmFileTest.dbrefOutputjalview.io.StockholmFileTest.dbrefOutput
|
1PASS
|
|
|
0.1643454
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel_HiddenColumnsjalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel_HiddenColumns
|
1PASS
|
|
|
0.1643454
|
jalview.renderer.seqfeatures.FeatureRendererTest.testIsVisiblejalview.renderer.seqfeatures.FeatureRendererTest.testIsVisible
|
1PASS
|
|
|
0.1643454
|
jalview.io.vcf.VCFLoaderTest.testDoLoadjalview.io.vcf.VCFLoaderTest.testDoLoad
|
1PASS
|
|
|
0.1615599
|
jalview.io.StockholmFileTest.secondaryStructureForRNASequencejalview.io.StockholmFileTest.secondaryStructureForRNASequence
|
1PASS
|
|
|
0.1615599
|
jalview.io.StockholmFileTest.curlyWUSSsecondaryStructureForRNASequencejalview.io.StockholmFileTest.curlyWUSSsecondaryStructureForRNASequence
|
1PASS
|
|
|
0.1615599
|
jalview.io.StockholmFileTest.fullWUSSsecondaryStructureForRNASequencejalview.io.StockholmFileTest.fullWUSSsecondaryStructureForRNASequence
|
1PASS
|
|
|
0.1615599
|
jalview.io.StockholmFileTest.stockholmFileRnaSSSpaceCharsjalview.io.StockholmFileTest.stockholmFileRnaSSSpaceChars
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_aaindexFormatjalview.io.ScoreMatrixFileTest.testParseMatrix_aaindexFormat
|
1PASS
|
|
|
0.13649026
|
jalview.analysis.scoremodels.ScoreMatrixTest.testOutputMatrix_roundTripjalview.analysis.scoremodels.ScoreMatrixTest.testOutputMatrix_roundTrip
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiFormatjalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiFormat
|
1PASS
|
|
|
0.13649026
|
jalview.util.MappingUtilsTest.testMapSequenceGroup_columnsjalview.util.MappingUtilsTest.testMapSequenceGroup_columns
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiHeaderRepeatedjalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiHeaderRepeated
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_aaindex_tooManyRowsjalview.io.ScoreMatrixFileTest.testParseMatrix_aaindex_tooManyRows
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiBadGuideCharacterjalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiBadGuideCharacter
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_headerMissingjalview.io.ScoreMatrixFileTest.testParseMatrix_headerMissing
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiMixedDelimitersjalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiMixedDelimiters
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_aaindex_mMissingjalview.io.ScoreMatrixFileTest.testParseMatrix_aaindex_mMissing
|
1PASS
|
|
|
0.13649026
|
jalview.analysis.DnaTest.testTranslateCdna_simplejalview.analysis.DnaTest.testTranslateCdna_simple
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiNameMissingjalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiNameMissing
|
1PASS
|
|
|
0.13649026
|
jalview.io.PfamFormatInputTest.testPfamFormatValidLimitsjalview.io.PfamFormatInputTest.testPfamFormatValidLimits
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiTooManyRowsjalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiTooManyRows
|
1PASS
|
|
|
0.13649026
|
jalview.datamodel.AlignmentTest.testAlignAs_cdnaAsProteinjalview.datamodel.AlignmentTest.testAlignAs_cdnaAsProtein
|
1PASS
|
|
|
0.13649026
|
jalview.datamodel.AlignmentTest.testAlignAs_proteinAsCdnajalview.datamodel.AlignmentTest.testAlignAs_proteinAsCdna
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_aaindex_rowColMismatchjalview.io.ScoreMatrixFileTest.testParseMatrix_aaindex_rowColMismatch
|
1PASS
|
|
|
0.13649026
|
jalview.datamodel.AlignmentTest.testCreateDatasetAlignmentjalview.datamodel.AlignmentTest.testCreateDatasetAlignment
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_aaindex_extraDataLinesjalview.io.ScoreMatrixFileTest.testParseMatrix_aaindex_extraDataLines
|
1PASS
|
|
|
0.13649026
|
jalview.datamodel.AlignmentTest.testCopyConstructorjalview.datamodel.AlignmentTest.testCopyConstructor
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiBadFloatjalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiBadFloat
|
1PASS
|
|
|
0.13649026
|
jalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodonsjalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodons
|
1PASS
|
|
|
0.13649026
|
jalview.datamodel.AlignmentTest.testAlignAs_cdnaAsProtein_singleSequencejalview.datamodel.AlignmentTest.testAlignAs_cdnaAsProtein_singleSequence
|
1PASS
|
|
|
0.13649026
|
jalview.datamodel.AlignmentTest.testAlignAs_dnaAsDnajalview.datamodel.AlignmentTest.testAlignAs_dnaAsDna
|
1PASS
|
|
|
0.13649026
|
jalview.util.MappingUtilsTest.testMapSequenceGroup_sequencesjalview.util.MappingUtilsTest.testMapSequenceGroup_sequences
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_aaindex_tooFewColumnsjalview.io.ScoreMatrixFileTest.testParseMatrix_aaindex_tooFewColumns
|
1PASS
|
|
|
0.13649026
|
jalview.io.EmblFlatFileTest.testParse_noUniprotXrefjalview.io.EmblFlatFileTest.testParse_noUniprotXref
|
1PASS
|
|
|
0.13649026
|
jalview.io.PfamFormatInputTest.testPfamFormatNoLimitsjalview.io.PfamFormatInputTest.testPfamFormatNoLimits
|
1PASS
|
|
|
0.13649026
|
jalview.util.MappingUtilsTest.testMapColumnSelection_proteinToDnajalview.util.MappingUtilsTest.testMapColumnSelection_proteinToDna
|
1PASS
|
|
|
0.13649026
|
jalview.util.MappingUtilsTest.testMapColumnSelection_hiddenColumnsjalview.util.MappingUtilsTest.testMapColumnSelection_hiddenColumns
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParse_ncbiFormatjalview.io.ScoreMatrixFileTest.testParse_ncbiFormat
|
1PASS
|
|
|
0.13649026
|
jalview.util.MappingUtilsTest.testMapColumnSelection_nulljalview.util.MappingUtilsTest.testMapColumnSelection_null
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiNotEnoughRowsjalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiNotEnoughRows
|
1PASS
|
|
|
0.13649026
|
jalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodonsAndHiddenColumnsjalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodonsAndHiddenColumns
|
1PASS
|
|
|
0.13649026
|
jalview.analysis.DnaTest.testTranslateCdna_hiddenColumnsjalview.analysis.DnaTest.testTranslateCdna_hiddenColumns
|
1PASS
|
|
|
0.13649026
|
jalview.util.MappingUtilsTest.testMapColumnSelection_dnaToProteinjalview.util.MappingUtilsTest.testMapColumnSelection_dnaToProtein
|
1PASS
|
|
|
0.13649026
|
jalview.util.MappingUtilsTest.testMapSequenceGroup_regionjalview.util.MappingUtilsTest.testMapSequenceGroup_region
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiBadDelimiterjalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiBadDelimiter
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiTooManyColumnsjalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiTooManyColumns
|
1PASS
|
|
|
0.13649026
|
jalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiNotEnoughColumnsjalview.io.ScoreMatrixFileTest.testParseMatrix_ncbiNotEnoughColumns
|
1PASS
|
|
|
0.13649026
|
jalview.analysis.AlignmentUtilsTests.testGetSequencesByNamejalview.analysis.AlignmentUtilsTests.testGetSequencesByName
|
1PASS
|
|
|
0.10027855
|
jalview.io.IdentifyFileTest.testIdentify_featureFilejalview.io.IdentifyFileTest.testIdentify_featureFile
|
1PASS
|
|
|
0.10027855
|
jalview.gui.FeatureSettingsTest.testIdentifyFeatureSettingsFilejalview.gui.FeatureSettingsTest.testIdentifyFeatureSettingsFile
|
1PASS
|
|
|
0.09470752
|
jalview.ext.jmol.JmolParserTest.testParse_missingResiduesjalview.ext.jmol.JmolParserTest.testParse_missingResidues
|
1PASS
|
|
|
0.09470752
|
jalview.ext.jmol.JmolParserTest.testParse_alternativeResiduesjalview.ext.jmol.JmolParserTest.testParse_alternativeResidues
|
1PASS
|
|
|
0.09192201
|
jalview.io.NewickFileTests.testTreeIOjalview.io.NewickFileTests.testTreeIO
|
1PASS
|
|
|
0.09192201
|
jalview.io.NewickFileTests.testTreeIOjalview.io.NewickFileTests.testTreeIO
|
1PASS
|
|
|
0.09192201
|
jalview.io.NewickFileTests.testTreeIOjalview.io.NewickFileTests.testTreeIO
|
1PASS
|
|
|
0.08356546
|
jalview.structures.models.AAStructureBindingModelTest.testImportPDBPreservesChainMappingsjalview.structures.models.AAStructureBindingModelTest.testImportPDBPreservesChainMappings
|
1PASS
|
|
|
0.07799443
|
jalview.io.TCoffeeScoreFileTest.testReadBlockjalview.io.TCoffeeScoreFileTest.testReadBlock
|
1PASS
|
|
|
0.07799443
|
jalview.io.FeaturesFileTest.testParseFiltersjalview.io.FeaturesFileTest.testParseFilters
|
1PASS
|
|
|
0.07799443
|
jalview.io.ClustalFileTest.testParse_noNumberingjalview.io.ClustalFileTest.testParse_noNumbering
|
1PASS
|
|
|
0.07799443
|
jalview.io.ClustalFileTest.testParse_withNumberingjalview.io.ClustalFileTest.testParse_withNumbering
|
1PASS
|
|
|
0.038997214
|
jalview.io.FileIOTester.testIsGzipInputStreamjalview.io.FileIOTester.testIsGzipInputStream
|
1PASS
|
|
|
0.027855154
|
jalview.ext.jmol.JmolCommandsTest.testGetColourBySequenceCommands_hiddenColumnsjalview.ext.jmol.JmolCommandsTest.testGetColourBySequenceCommands_hiddenColumns
|
1PASS
|
|
|
0.027855154
|
jalview.analysis.AlignmentUtilsTests.testExpandContextjalview.analysis.AlignmentUtilsTests.testExpandContext
|
1PASS
|
|
|
0.027855154
|
jalview.datamodel.AlignmentAnnotationTests.testLiftOverjalview.datamodel.AlignmentAnnotationTests.testLiftOver
|
1PASS
|
|
|
0.0027855153
|
jalview.viewmodel.ViewportRangesTest.testPageUpDownWrappedjalview.viewmodel.ViewportRangesTest.testPageUpDownWrapped
|
1PASS
|
|
|
0.0027855153
|
jalview.io.FeaturesFileTest.testOutputFeatureFiltersjalview.io.FeaturesFileTest.testOutputFeatureFilters
|
1PASS
|
|
|
0.0027855153
|
jalview.datamodel.PAEContactMatrixTest.testSeqAssociatedPAEMatrixjalview.datamodel.PAEContactMatrixTest.testSeqAssociatedPAEMatrix
|
1PASS
|
|
|
0.0027855153
|
jalview.viewmodel.ViewportRangesTest.testGetWrappedScrollPositionjalview.viewmodel.ViewportRangesTest.testGetWrappedScrollPosition
|
1PASS
|
|
|
0.0027855153
|
jalview.datamodel.AlignmentTest.testPropagateInsertionsOverlapjalview.datamodel.AlignmentTest.testPropagateInsertionsOverlap
|
1PASS
|
|
|
0.0027855153
|
jalview.viewmodel.ViewportRangesTest.testScrollUp_wrappedjalview.viewmodel.ViewportRangesTest.testScrollUp_wrapped
|
1PASS
|
|
|
0.0027855153
|
jalview.datamodel.HiddenColumnsTest.testHideColumnsjalview.datamodel.HiddenColumnsTest.testHideColumns
|
1PASS
|
|
|
0.0027855153
|
jalview.datamodel.AlignmentTest.testPropagateInsertionsjalview.datamodel.AlignmentTest.testPropagateInsertions
|
1PASS
|
|
|
0.0027855153
|
jalview.viewmodel.ViewportRangesTest.testSetViewportLocationjalview.viewmodel.ViewportRangesTest.testSetViewportLocation
|
1PASS
|
|
|
0.0027855153
|
jalview.datamodel.ColumnSelectionTest.testInvertColumnSelectionjalview.datamodel.ColumnSelectionTest.testInvertColumnSelection
|
1PASS
|
|
|
0.0027855153
|
jalview.datamodel.AlignmentTest.testDeleteSequenceByIndexjalview.datamodel.AlignmentTest.testDeleteSequenceByIndex
|
1PASS
|
|
|
0.0027855153
|
jalview.datamodel.SequenceTest.testLocateVisibleStartofSequencejalview.datamodel.SequenceTest.testLocateVisibleStartofSequence
|
1PASS
|
|
|
0.0027855153
|
jalview.datamodel.ColumnSelectionTest.testHideColumns_withSelectionjalview.datamodel.ColumnSelectionTest.testHideColumns_withSelection
|
1PASS
|
|
|
0.0027855153
|
jalview.analysis.CrossRefTest.testFindXrefSequences_indirectDbrefToProteinjalview.analysis.CrossRefTest.testFindXrefSequences_indirectDbrefToProtein
|
1PASS
|
|
|
0.0027855153
|
jalview.datamodel.ColumnSelectionTest.testHideSelectedColumnsjalview.datamodel.ColumnSelectionTest.testHideSelectedColumns
|
1PASS
|
|
|
0.0027855153
|
jalview.viewmodel.ViewportRangesTest.testGetWrappedMaxScrolljalview.viewmodel.ViewportRangesTest.testGetWrappedMaxScroll
|
1PASS
|
|
|
0.0027855153
|
jalview.ext.jmol.JmolParserTest.testSetSecondaryStructurejalview.ext.jmol.JmolParserTest.testSetSecondaryStructure
|
1PASS
|
|
|
0.0027855153
|
jalview.analysis.DnaTest.testTranslateCdna_sequenceOrderIndependentjalview.analysis.DnaTest.testTranslateCdna_sequenceOrderIndependent
|
1PASS
|
|
|
0.0027855153
|
jalview.datamodel.AlignmentTest.testDeleteSequenceBySeqjalview.datamodel.AlignmentTest.testDeleteSequenceBySeq
|
1PASS
|
|
|
0.0027855153
|
jalview.datamodel.AlignmentTest.testDeleteHiddenSequencejalview.datamodel.AlignmentTest.testDeleteHiddenSequence
|
1PASS
|
|
|
0.0027855153
|
jalview.viewmodel.ViewportRangesTest.testScrollToWrappedVisiblejalview.viewmodel.ViewportRangesTest.testScrollToWrappedVisible
|
1PASS
|
|