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mc_view.Atom
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com.stevesoft.pat.Pattern
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jalview.util.FileUtils
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jalview.ws.rest.RestClient
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jalview.gui.ProgressBar
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jalview.util.ShortcutKeyMaskExWrapper
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jalview.schemes.ColourSchemeProperty
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jalview.analysis.scoremodels.ScoreMatrix
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com.stevesoft.pat.parsePerl
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org.json.simple.parser.Yytoken
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jalview.util.ColorUtils
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jalview.util.JSONUtils
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com.stevesoft.pat.Or
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jalview.util.ChannelProperties
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jalview.ws.dbsources.Xfam
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jalview.schemes.RNAHelicesColour
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jalview.urls.UrlProvider
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com.stevesoft.pat.OrMark
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com.stevesoft.pat.FastMulti
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jalview.gui.IdPanel
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com.stevesoft.pat.RegOpt
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jalview.analysis.CrossRef
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jalview.datamodel.DBRefEntry
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ext.vamsas.ServiceHandle
ext.vamsas.ServiceHandle
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jalview.ws.jws1.Discoverer
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jalview.analysis.GeneticCodes
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jalview.structure.StructureMapping
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jalview.util.DBRefUtils
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jalview.analysis.AlignmentUtils
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jalview.gui.structurechooser.ThreeDBStructureChooserQuerySource
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org.json.simple.JSONObject
org.json.simple.JSONObject
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jalview.datamodel.HiddenColumns
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jalview.util.UrlLink
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jalview.ws.dbsources.Uniprot
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jalview.gui.StructureViewer
jalview.gui.StructureViewer
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jalview.controller.AlignViewController
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jalview.io.SequenceAnnotationReport
jalview.io.SequenceAnnotationReport
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jalview.ext.ensembl.EnsemblGene
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org.json.simple.JSONArray
org.json.simple.JSONArray
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com.stevesoft.pat.RegRes
com.stevesoft.pat.RegRes
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jalview.ext.jmol.JalviewJmolBinding
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com.stevesoft.pat.CaseMgr
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