|
jalview.ws.WSClient
jalview.ws.WSClient
|
1.0100%
|
|
|
jalview.datamodel.RangeIterator
jalview.datamodel.RangeIterator
|
0.810810881.1%
|
|
|
jalview.datamodel.VisibleContigsIterator
jalview.datamodel.VisibleContigsIterator
|
0.6595744566%
|
|
|
jalview.analysis.AlignmentGenerator
jalview.analysis.AlignmentGenerator
|
0.5076923450.8%
|
|
|
jalview.datamodel.HiddenCursorPosition
jalview.datamodel.HiddenCursorPosition
|
0.4285714342.9%
|
|
|
jalview.datamodel.CigarArray
jalview.datamodel.CigarArray
|
0.3979591739.8%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.3307086533.1%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.3278546632.8%
|
|
|
jalview.datamodel.CigarBase
jalview.datamodel.CigarBase
|
0.3244837832.4%
|
|
|
jalview.datamodel.SeqCigar
jalview.datamodel.SeqCigar
|
0.3170731731.7%
|
|
|
jalview.ws.rest.RestServiceDescription
jalview.ws.rest.RestServiceDescription
|
0.31531.5%
|
|
|
jalview.ws.uimodel.AlignAnalysisUIText
jalview.ws.uimodel.AlignAnalysisUIText
|
0.2439024424.4%
|
|
|
jalview.ws.rest.params.Alignment
jalview.ws.rest.params.Alignment
|
0.2435897424.4%
|
|
|
jalview.util.MessageManager
jalview.util.MessageManager
|
0.2380952423.8%
|
|
|
jalview.datamodel.SequenceCursor
jalview.datamodel.SequenceCursor
|
0.2333333323.3%
|
|
|
jalview.io.FastaFile
jalview.io.FastaFile
|
0.2252252322.5%
|
|
|
jalview.ws.rest.InputType
jalview.ws.rest.InputType
|
0.2056074720.6%
|
|
|
jalview.gui.JvSwingUtils
jalview.gui.JvSwingUtils
|
0.1836734718.4%
|
|
|
jalview.datamodel.HiddenColumnsCursor
jalview.datamodel.HiddenColumnsCursor
|
0.17187517.2%
|
|
|
jalview.ws.jws2.Jws2Client
jalview.ws.jws2.Jws2Client
|
0.162650616.3%
|
|
|
jalview.ws.jws2.jabaws2.Jws2Instance
jalview.ws.jws2.jabaws2.Jws2Instance
|
0.1609195516.1%
|
|
|
jalview.util.StringUtils
jalview.util.StringUtils
|
0.1415384614.2%
|
|
|
jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
|
0.1415094314.2%
|
|
|
jalview.ws.rest.params.SeqGroupIndexVector
jalview.ws.rest.params.SeqGroupIndexVector
|
0.12408759412.4%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.1210191112.1%
|
|
|
jalview.ws.rest.RestClient
jalview.ws.rest.RestClient
|
0.11538461611.5%
|
|
|
jalview.analysis.SeqsetUtils
jalview.analysis.SeqsetUtils
|
0.1027397310.3%
|
|
|
jalview.ws.rest.params.AnnotationFile
jalview.ws.rest.params.AnnotationFile
|
0.10256410410.3%
|
|
|
jalview.ws.jws2.MsaWSClient
jalview.ws.jws2.MsaWSClient
|
0.1006711410.1%
|
|
|
jalview.io.FileFormats
jalview.io.FileFormats
|
0.088%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.079143397.9%
|
|
|
jalview.datamodel.AlignmentView
jalview.datamodel.AlignmentView
|
0.0757800867.6%
|
|
|
jalview.log.JLogger
jalview.log.JLogger
|
0.065934076.6%
|
|
|
jalview.io.AlignFile
jalview.io.AlignFile
|
0.0616438356.2%
|
|
|
jalview.workers.AlignCalcManager
jalview.workers.AlignCalcManager
|
0.059523816%
|
|
|
jalview.ws.jws2.SequenceAnnotationWSClient
jalview.ws.jws2.SequenceAnnotationWSClient
|
0.053763445.4%
|
|
|
jalview.bin.Console
jalview.bin.Console
|
0.0492610824.9%
|
|
|
jalview.ws.jws2.JabaParamStore
jalview.ws.jws2.JabaParamStore
|
0.0364583323.6%
|
|
|
jalview.util.ShiftList
jalview.util.ShiftList
|
0.0338983053.4%
|
|
|
jalview.ws.jws2.Jws2Discoverer
jalview.ws.jws2.Jws2Discoverer
|
0.0336633663.4%
|
|
|
jalview.bin.Cache
jalview.bin.Cache
|
0.0316804423.2%
|
|
|
jalview.io.FileFormat
jalview.io.FileFormat
|
0.0310077523.1%
|
|
|
jalview.analysis.AlignSeq
jalview.analysis.AlignSeq
|
0.0128205131.3%
|
|
|
jalview.gui.AlignFrame
jalview.gui.AlignFrame
|
0.0100322471%
|
|
|
jalview.util.Platform
jalview.util.Platform
|
0.0094339620.9%
|
|
|
jalview.datamodel.HiddenSequences
jalview.datamodel.HiddenSequences
|
0.009132420.9%
|
|
|
jalview.io.FileParse
jalview.io.FileParse
|
0.00278551530.3%
|
|
|
jalview.viewmodel.AlignmentViewport
jalview.viewmodel.AlignmentViewport
|
0.00151745070.2%
|
|
